| american samoa | | mycobacterium intracellulare | species | 0 | 1 |
| argentina | | mycobacterium avium | species | 1 | 0 |
| argentina | | mycobacterium avium subsp. hominissuis | subspecies | 1 | 0 |
| argentina | | mycobacterium avium subsp. paratuberculosis | subspecies | 117 | 0 |
| argentina | | mycobacterium intracellulare | species | 2 | 0 |
| argentina | buenos aires city | mycobacterium avium | species | 0 | 2 |
| argentina | buenos aires city | mycobacterium avium complex | species | 0 | 1 |
| argentina | buenos aires city | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| argentina | buenos aires province | mycobacterium avium | species | 0 | 3 |
| argentina | buenos aires province | mycobacterium avium complex | species | 0 | 1 |
| argentina | buenos aires province | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| argentina | buenos aires province | mycobacterium intracellulare | species | 0 | 1 |
| argentina | cordoba province | mycobacterium avium | species | 0 | 1 |
| argentina | cordoba province | mycobacterium avium complex | species | 0 | 1 |
| argentina | cordoba province | mycobacterium avium-intracellulare | species | 0 | 1 |
| argentina | tierra del fuego province | mycobacterium avium subsp. paratuberculosis | subspecies | 121 | 0 |
| australia | | mycobacterium avium subsp. paratuberculosis clij361 | no rank | 2296 | 0 |
| australia | | mycobacterium avium subsp. paratuberculosis clij623 | no rank | 1832 | 0 |
| australia | | mycobacterium avium subsp. paratuberculosis clij644 | no rank | 1274 | 0 |
| australia | | mycobacterium avium subsp. paratuberculosis pt139 | no rank | 1506 | 0 |
| australia | | mycobacterium avium subsp. paratuberculosis pt144 | no rank | 1678 | 0 |
| australia | | mycobacterium avium subsp. paratuberculosis pt145 | no rank | 1834 | 0 |
| australia | | mycobacterium avium subsp. paratuberculosis pt146 | no rank | 1912 | 0 |
| australia | | mycobacterium avium subsp. paratuberculosis pt154 | no rank | 2156 | 0 |
| australia | | mycobacterium avium subsp. paratuberculosis pt155 | no rank | 1916 | 0 |
| australia | | mycobacterium avium subsp. paratuberculosis pt164 | no rank | 1186 | 0 |
| australia | | mycobacterium chimaera | species | 12 | 0 |
| australia | new south wales | mycobacterium avium | species | 0 | 24 |
| australia | new south wales | mycobacterium avium complex | species | 0 | 3 |
| australia | new south wales | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 19 |
| australia | new south wales | mycobacterium avium-intracellulare | species | 0 | 2 |
| australia | northern territory | mycobacterium avium | species | 0 | 4 |
| australia | northern territory | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 3 |
| australia | northern territory | mycobacterium intracellulare | species | 0 | 1 |
| australia | queensland | mycobacterium avium | species | 0 | 15 |
| australia | queensland | mycobacterium avium complex | species | 0 | 6 |
| australia | queensland | mycobacterium avium complex (mac) | species group | 0 | 1 |
| australia | queensland | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 4 |
| australia | queensland | mycobacterium avium-intracellulare | species | 0 | 1 |
| australia | queensland | mycobacterium intracellulare | species | 0 | 4 |
| australia | south australia | mycobacterium avium | species | 0 | 3 |
| australia | south australia | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 3 |
| australia | tasmania | mycobacterium avium | species | 0 | 1 |
| australia | tasmania | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| australia | victoria | mycobacterium avium | species | 0 | 15 |
| australia | victoria | mycobacterium avium complex | species | 0 | 4 |
| australia | victoria | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 11 |
| australia | victoria | mycobacterium avium-intracellulare | species | 0 | 1 |
| australia | western australia | mycobacterium avium | species | 0 | 10 |
| australia | western australia | mycobacterium avium complex | species | 0 | 2 |
| australia | western australia | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 6 |
| australia | western australia | mycobacterium avium-intracellulare | species | 0 | 1 |
| australia | western australia | mycobacterium chimaera | species | 0 | 1 |
| austria | carinthia | mycobacterium avium | species | 0 | 1 |
| austria | carinthia | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| austria | salzburg | mycobacterium avium | species | 0 | 1 |
| austria | salzburg | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| austria | styria | mycobacterium avium | species | 0 | 3 |
| austria | styria | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 3 |
| austria | tyrol | mycobacterium avium | species | 0 | 1 |
| austria | tyrol | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| austria | vorarlberg | mycobacterium avium | species | 0 | 1 |
| austria | vorarlberg | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| barbados | | mycobacterium intracellulare | species | 0 | 1 |
| belarus | | mycobacterium avium xtb13-223 | no rank | 43 | 0 |
| bolivia | tarija department | mycobacterium avium | species | 0 | 1 |
| bolivia | tarija department | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| brazil | | mycobacterium avium complex | species | 8 | 0 |
| brazil | | mycobacterium avium subsp. paratuberculosis | subspecies | 2 | 0 |
| brazil | | mycobacterium intracellulare | species | 14 | 0 |
| brazil | minas gerais | mycobacterium avium | species | 0 | 3 |
| brazil | minas gerais | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| brazil | para | mycobacterium avium | species | 0 | 1 |
| brazil | para | mycobacterium avium complex | species | 0 | 1 |
| brazil | para | mycobacterium avium complex (mac) | species group | 0 | 1 |
| brazil | para | mycobacterium colombiense | species | 0 | 1 |
| brazil | pernambuco | mycobacterium avium | species | 0 | 1 |
| brazil | pernambuco | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| brazil | rio de janeiro | mycobacterium avium | species | 0 | 7 |
| brazil | rio de janeiro | mycobacterium avium complex | species | 0 | 2 |
| brazil | rio de janeiro | mycobacterium avium complex (mac) | species group | 0 | 1 |
| brazil | rio de janeiro | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| brazil | rio de janeiro | mycobacterium avium-intracellulare | species | 0 | 1 |
| brazil | rio de janeiro | mycobacterium marseillense | species | 0 | 1 |
| brazil | rio de janeiro | mycobacterium timonense | species | 0 | 1 |
| brazil | rio grande do sul | mycobacterium avium | species | 0 | 1 |
| brazil | rio grande do sul | mycobacterium avium complex | species | 0 | 1 |
| brazil | sao paulo | mycobacterium avium | species | 0 | 7 |
| brazil | sao paulo | mycobacterium avium complex | species | 0 | 5 |
| brazil | sao paulo | mycobacterium avium-intracellulare | species | 0 | 5 |
| cambodia | | mycobacterium colombiense | species | 768 | 0 |
| cambodia | | mycobacterium intracellulare | species | 682 | 0 |
| cambodia | | mycobacterium yongonense | species | 649 | 0 |
| canada | | mycobacterium avium | species | 2 | 0 |
| canada | | mycobacterium avium subsp. paratuberculosis | subspecies | 1134 | 0 |
| canada | alberta | mycobacterium avium | species | 0 | 18 |
| canada | alberta | mycobacterium avium complex | species | 0 | 1 |
| canada | alberta | mycobacterium avium subsp. hominissuis | subspecies | 1 | 0 |
| canada | alberta | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 6 |
| canada | british columbia | mycobacterium avium | species | 0 | 8 |
| canada | british columbia | mycobacterium avium complex | species | 0 | 2 |
| canada | british columbia | mycobacterium avium complex (mac) | species group | 0 | 2 |
| canada | british columbia | mycobacterium avium-intracellulare | species | 0 | 1 |
| canada | british columbia | mycobacterium chimaera | species | 6 | 0 |
| canada | manitoba | mycobacterium avium | species | 0 | 5 |
| canada | manitoba | mycobacterium avium complex | species | 0 | 1 |
| canada | manitoba | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| canada | new brunswick | mycobacterium avium | species | 0 | 1 |
| canada | new brunswick | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| canada | newfoundland and labrador | mycobacterium avium | species | 0 | 1 |
| canada | northwest territories | mycobacterium avium | species | 0 | 1 |
| canada | nova scotia | mycobacterium avium | species | 0 | 1 |
| canada | nova scotia | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| canada | ontario | mycobacterium avium | species | 0 | 20 |
| canada | ontario | mycobacterium avium complex | species | 0 | 7 |
| canada | ontario | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 9 |
| canada | ontario | mycobacterium avium-intracellulare | species | 0 | 2 |
| canada | ontario | mycobacterium intracellulare | species | 0 | 1 |
| canada | prince edward island | mycobacterium avium | species | 0 | 1 |
| canada | prince edward island | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| canada | quebec | mycobacterium avium | species | 0 | 5 |
| canada | quebec | mycobacterium avium complex | species | 0 | 2 |
| canada | quebec | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| canada | saskatchewan | mycobacterium avium | species | 0 | 5 |
| canada | saskatchewan | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| chile | | mycobacterium avium subsp. paratuberculosis | subspecies | 2 | 0 |
| china | | mycobacterium avium | species | 8 | 0 |
| china | | mycobacterium bouchedurhonense | species | 4 | 0 |
| china | | mycobacterium colombiense | species | 61 | 0 |
| china | | mycobacterium intracellulare | species | 47 | 0 |
| china | | mycobacterium mantenii | species | 3 | 0 |
| china | | mycobacterium timonense | species | 9 | 0 |
| china | | mycobacterium vulneris | species | 14 | 0 |
| china | beijing | mycobacterium avium | species | 0 | 3 |
| china | beijing | mycobacterium avium complex | species | 0 | 1 |
| china | beijing | mycobacterium avium complex (mac) | species group | 0 | 1 |
| china | beijing | mycobacterium avium-intracellulare | species | 0 | 1 |
| china | beijing | mycobacterium intracellulare | species | 0 | 1 |
| china | guangdong | mycobacterium avium | species | 0 | 3 |
| china | hunan | mycobacterium avium | species | 2 | 0 |
| china | inner mongolia | mycobacterium avium subsp. paratuberculosis | subspecies | 29 | 0 |
| china | jilin | mycobacterium avium | species | 2 | 1 |
| china | shandong | mycobacterium avium subsp. paratuberculosis | subspecies | 1185 | 0 |
| china | sichuan | mycobacterium chimaera | species | 856 | 0 |
| china | zhejiang | mycobacterium avium | species | 2 | 0 |
| china | zhejiang | mycobacterium intracellulare | species | 53 | 0 |
| china | zhejiang | mycobacterium yongonense | species | 4 | 0 |
| colombia | | mycobacterium colombiense cect 3035 | no rank | 37 | 0 |
| colombia | antioquia department | mycobacterium avium | species | 0 | 1 |
| colombia | antioquia department | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| colombia | captial district | mycobacterium avium | species | 0 | 4 |
| colombia | captial district | mycobacterium avium complex | species | 0 | 2 |
| colombia | captial district | mycobacterium colombiense | species | 3 | 0 |
| cyprus | | mycobacterium avium | species | 1 | 2 |
| cyprus | | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| czech republic | | mycobacterium avium subsp. paratuberculosis | subspecies | 5 | 0 |
| czech republic | oardubice region | mycobacterium avium subsp. avium | subspecies | 1 | 0 |
| czech republic | south moravian region | mycobacterium avium | species | 0 | 1 |
| czech republic | south moravian region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| democratic republic of the congo | kinshasa city | mycobacterium avium | species | 0 | 3 |
| democratic republic of the congo | kinshasa city | mycobacterium avium complex | species | 0 | 1 |
| democratic republic of the congo | kinshasa city | mycobacterium avium-intracellulare | species | 0 | 1 |
| denmark | | mycobacterium arosiense | species | 3 | 0 |
| denmark | | mycobacterium arosiense atcc baa-1401 | no rank | 1 | 0 |
| denmark | region zealand | mycobacterium avium | species | 0 | 1 |
| denmark | region zealand | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| ecuador | | mycobacterium timonense | species | 3 | 0 |
| egypt | | mycobacterium avium subsp. paratuberculosis | subspecies | 16 | 0 |
| egypt | alexandria governorate | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| egypt | cairo governorate | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| egypt | dakahlia governorate | mycobacterium avium subsp. paratuberculosis | subspecies | 2 | 0 |
| egypt | giza governorate | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| egypt | ismailia governorate | mycobacterium avium subsp. paratuberculosis | subspecies | 2 | 0 |
| faroe islands | | mycobacterium avium | species | 0 | 2 |
| faroe islands | | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| finland | | mycobacterium avium subsp. hominissuis | subspecies | 1 | 0 |
| france | | mycobacterium avium subsp. paratuberculosis | subspecies | 4 | 0 |
| france | | mycobacterium avium subsp. silvaticum atcc 49884 | no rank | 1618 | 0 |
| france | bretagne region | mycobacterium avium | species | 0 | 1 |
| france | bretagne region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| france | centre region | mycobacterium avium | species | 0 | 1 |
| france | centre region | mycobacterium avium complex | species | 0 | 1 |
| france | ile-de-france region | mycobacterium avium | species | 0 | 3 |
| france | ile-de-france region | mycobacterium avium complex | species | 0 | 2 |
| france | ile-de-france region | mycobacterium avium complex (mac) | species group | 0 | 1 |
| france | ile-de-france region | mycobacterium avium-intracellulare | species | 0 | 2 |
| france | limousin region | mycobacterium avium | species | 0 | 1 |
| france | limousin region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| france | picardie region | mycobacterium avium | species | 0 | 1 |
| france | picardie region | mycobacterium avium complex | species | 0 | 1 |
| france | picardie region | mycobacterium avium-intracellulare | species | 0 | 1 |
| french polynesia | | mycobacterium avium | species | 0 | 1 |
| french polynesia | | mycobacterium avium-intracellulare | species | 0 | 1 |
| germany | | mycobacterium avium | species | 3 | 0 |
| germany | | mycobacterium avium subsp. hominissuis | subspecies | 30264 | 0 |
| germany | | mycobacterium avium subsp. hominissuis mah 2721 | no rank | 2195 | 0 |
| germany | | mycobacterium avium subsp. paratuberculosis | subspecies | 20 | 0 |
| germany | | mycobacterium avium subsp. silvaticum | subspecies | 7 | 0 |
| germany | bavaria | mycobacterium avium | species | 0 | 1 |
| germany | berlin | mycobacterium avium | species | 0 | 1 |
| germany | berlin | mycobacterium avium complex | species | 0 | 1 |
| germany | berlin | mycobacterium avium complex (mac) | species group | 0 | 1 |
| germany | berlin | mycobacterium avium subsp. hominissuis | subspecies | 336 | 0 |
| germany | berlin | mycobacterium avium subsp. hominissuis mah 27-1 | no rank | 1956 | 0 |
| germany | hesse | mycobacterium avium | species | 0 | 1 |
| germany | hesse | mycobacterium avium subsp. paratuberculosis | subspecies | 3 | 0 |
| germany | lower saxony | mycobacterium avium | species | 0 | 2 |
| germany | lower saxony | mycobacterium avium subsp. avium | subspecies | 8 | 0 |
| germany | lower saxony | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| germany | lower saxony | mycobacterium indicus pranii | species | 1 | 0 |
| germany | lower saxony | mycobacterium intracellulare | species | 4 | 0 |
| germany | north rhine-westphalia | mycobacterium avium subsp. paratuberculosis | subspecies | 185 | 0 |
| germany | rhineland-palatinate | mycobacterium avium | species | 0 | 1 |
| germany | rhineland-palatinate | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 1 |
| germany | saxony | mycobacterium avium | species | 0 | 2 |
| germany | saxony | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| germany | thuringen | mycobacterium avium | species | 0 | 2 |
| germany | thuringen | mycobacterium avium subsp. paratuberculosis | subspecies | 2 | 1 |
| greece | crete region | mycobacterium avium | species | 0 | 1 |
| greece | crete region | mycobacterium intracellulare | species | 0 | 1 |
| greece | west greece region | mycobacterium avium | species | 0 | 1 |
| greece | west greece region | mycobacterium avium subsp. avium | subspecies | 0 | 1 |
| greece | west greece region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| grenada | | mycobacterium avium | species | 0 | 1 |
| grenada | | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| guadeloupe | | mycobacterium avium | species | 0 | 1 |
| guadeloupe | | mycobacterium avium complex | species | 0 | 1 |
| guadeloupe | | mycobacterium avium complex (mac) | species group | 0 | 1 |
| guam | | mycobacterium chimaera | species | 3 | 0 |
| guatemala | guatemala department | mycobacterium avium | species | 0 | 1 |
| guatemala | guatemala department | mycobacterium avium-intracellulare | species | 0 | 1 |
| guernsey | | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| guinea-bissau | bissau region | mycobacterium avium | species | 0 | 2 |
| guinea-bissau | bissau region | mycobacterium avium complex | species | 0 | 2 |
| haiti | | mycobacterium avium | species | 0 | 3 |
| hong kong | | mycobacterium avium | species | 0 | 6 |
| hong kong | | mycobacterium avium complex | species | 0 | 3 |
| hong kong | | mycobacterium avium-intracellulare | species | 0 | 3 |
| hungary | | mycobacterium avium subsp. silvaticum | subspecies | 2 | 0 |
| iceland | southern region | mycobacterium avium | species | 0 | 1 |
| iceland | southern region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| india | | mycobacterium arosiense | species | 1 | 0 |
| india | | mycobacterium avium | species | 6 | 0 |
| india | | mycobacterium avium subsp. paratuberculosis | subspecies | 43 | 0 |
| india | | mycobacterium colombiense | species | 1042 | 0 |
| india | | mycobacterium intracellulare | species | 10 | 0 |
| india | | mycobacterium intracellulare mott-64 | no rank | 1 | 0 |
| india | | mycobacterium marseillense | species | 1 | 0 |
| india | | mycobacterium timonense | species | 1 | 0 |
| india | gujarat | mycobacterium avium | species | 0 | 1 |
| india | haryana | mycobacterium avium | species | 0 | 1 |
| india | haryana | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| india | kerala | mycobacterium avium | species | 0 | 2 |
| india | kerala | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| india | madhya pradesh | mycobacterium chimaera | species | 1 | 0 |
| india | madhya pradesh | mycobacterium intracellulare | species | 1 | 0 |
| india | maharashtra | mycobacterium avium | species | 1 | 1 |
| india | meghalaya | mycobacterium sp. hnp-1 | species | 3 | 0 |
| india | national capital territory of delhi | mycobacterium avium | species | 0 | 3 |
| india | national capital territory of delhi | mycobacterium avium complex | species | 0 | 1 |
| india | national capital territory of delhi | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| india | national capital territory of delhi | mycobacterium indicus pranii | species | 159 | 0 |
| india | punjab | mycobacterium avium | species | 0 | 3 |
| india | punjab | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 2 |
| india | sikkim | mycobacterium avium subsp. paratuberculosis | subspecies | 2 | 0 |
| india | tamil nadu | mycobacterium avium | species | 1 | 0 |
| india | tamil nadu | mycobacterium avium subsp. paratuberculosis | subspecies | 5 | 0 |
| india | tamil nadu | mycobacterium intracellulare | species | 1 | 0 |
| india | uttar pradesh | mycobacterium avium | species | 0 | 8 |
| india | uttar pradesh | mycobacterium avium subsp. paratuberculosis | subspecies | 54 | 8 |
| india | uttar pradesh | mycobacterium avium subsp. paratuberculosis s5 | no rank | 359 | 0 |
| india | uttar pradesh | mycobacterium indicus pranii | species | 0 | 1 |
| india | west bengal | mycobacterium avium | species | 0 | 1 |
| indonesia | | mycobacterium avium | species | 1 | 0 |
| indonesia | | mycobacterium intracellulare | species | 5 | 0 |
| iran | | mycobacterium avium | species | 2 | 0 |
| iran | | mycobacterium avium subsp. avium | subspecies | 2 | 0 |
| iran | | mycobacterium avium subsp. paratuberculosis | subspecies | 96 | 0 |
| iran | | mycobacterium chimaera | species | 7 | 0 |
| iran | | mycobacterium colombiense | species | 3 | 0 |
| iran | | mycobacterium intracellulare | species | 10 | 0 |
| iran | | mycobacterium yongonense | species | 21 | 0 |
| iran | fars province | mycobacterium avium | species | 0 | 3 |
| iran | fars province | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| iran | khuzestan province | mycobacterium avium | species | 0 | 1 |
| iran | tehran province | mycobacterium avium subsp. paratuberculosis | subspecies | 20 | 0 |
| iraq | | mycobacterium avium | species | 6 | 0 |
| iraq | | mycobacterium avium subsp. paratuberculosis | subspecies | 3 | 0 |
| iraq | basra governorate | mycobacterium avium | species | 0 | 1 |
| iraq | basra governorate | mycobacterium avium complex | species | 0 | 1 |
| ireland | | mycobacterium chimaera | species | 1220 | 0 |
| ireland | leinster province | mycobacterium avium | species | 0 | 1 |
| ireland | leinster province | mycobacterium chimaera | species | 1220 | 0 |
| ireland | munster province | mycobacterium avium | species | 0 | 1 |
| israel | tel aviv district | mycobacterium avium | species | 0 | 1 |
| israel | tel aviv district | mycobacterium avium complex | species | 0 | 1 |
| israel | tel aviv district | mycobacterium avium-intracellulare | species | 0 | 1 |
| italy | | mycobacterium avium subsp. avium | subspecies | 1 | 0 |
| italy | | mycobacterium chimaera | species | 767 | 0 |
| italy | apulia region | mycobacterium avium | species | 0 | 1 |
| italy | emilia-romagna region | mycobacterium avium | species | 0 | 1 |
| italy | emilia-romagna region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| italy | emilia-romagna region | mycobacterium chimaera | species | 218 | 0 |
| italy | lombardy region | mycobacterium avium | species | 0 | 2 |
| italy | lombardy region | mycobacterium avium complex | species | 0 | 1 |
| italy | lombardy region | mycobacterium avium subsp. hominissuis | subspecies | 1 | 0 |
| italy | lombardy region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| italy | lombardy region | mycobacterium avium-intracellulare | species | 0 | 1 |
| italy | piemonte region | mycobacterium avium subsp. avium | subspecies | 1 | 0 |
| italy | piemonte region | mycobacterium avium subsp. hominissuis | subspecies | 1 | 0 |
| italy | sardinia autonomous region | mycobacterium avium | species | 0 | 13 |
| italy | sardinia autonomous region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 8 |
| italy | tuscany region | mycobacterium avium | species | 0 | 3 |
| italy | tuscany region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 3 |
| italy | tuscany region | mycobacterium chimaera | species | 24 | 0 |
| italy | umbria region | mycobacterium avium | species | 0 | 1 |
| italy | umbria region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| italy | veneto region | mycobacterium avium | species | 0 | 1 |
| italy | veneto region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| japan | | mycobacterium avium | species | 2 | 0 |
| japan | | mycobacterium avium complex | species | 1 | 0 |
| japan | | mycobacterium avium subsp. hominissuis | subspecies | 34840 | 0 |
| japan | | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| japan | | mycobacterium intracellulare | species | 4007 | 0 |
| japan | | mycobacterium intracellulare mott-64 | no rank | 2548 | 0 |
| japan | aichi prefecture | mycobacterium avium | species | 0 | 1 |
| japan | aichi prefecture | mycobacterium avium complex | species | 2 | 1 |
| japan | aichi prefecture | mycobacterium avium complex (mac) | species group | 0 | 1 |
| japan | aichi prefecture | mycobacterium avium subsp. hominissuis | subspecies | 3 | 0 |
| japan | aichi prefecture | mycobacterium avium-intracellulare | species | 0 | 1 |
| japan | aichi prefecture | mycobacterium intracellulare | species | 1 | 0 |
| japan | aomori prefecture | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| japan | gifu prefecture | mycobacterium avium subsp. hominissuis | subspecies | 2124 | 0 |
| japan | gifu prefecture | mycobacterium colombiense | species | 728 | 0 |
| japan | gunma prefecture | mycobacterium avium | species | 0 | 1 |
| japan | gunma prefecture | mycobacterium avium-intracellulare | species | 0 | 1 |
| japan | hiroshima prefecture | mycobacterium avium | species | 0 | 1 |
| japan | hiroshima prefecture | mycobacterium avium complex | species | 0 | 1 |
| japan | hiroshima prefecture | mycobacterium avium complex (mac) | species group | 0 | 1 |
| japan | hiroshima prefecture | mycobacterium avium-intracellulare | species | 0 | 1 |
| japan | hokkaido prefecture | mycobacterium avium | species | 0 | 3 |
| japan | hokkaido prefecture | mycobacterium avium complex | species | 0 | 2 |
| japan | hokkaido prefecture | mycobacterium avium complex (mac) | species group | 0 | 2 |
| japan | hokkaido prefecture | mycobacterium avium subsp. hominissuis | subspecies | 438 | 0 |
| japan | hokkaido prefecture | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| japan | hokkaido prefecture | mycobacterium avium-intracellulare | species | 0 | 2 |
| japan | hyogo prefecture | mycobacterium avium | species | 0 | 1 |
| japan | hyogo prefecture | mycobacterium avium subsp. hominissuis | subspecies | 336 | 0 |
| japan | iwate prefecture | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| japan | kanagawa prefecture | mycobacterium avium | species | 0 | 1 |
| japan | kanagawa prefecture | mycobacterium avium-intracellulare | species | 0 | 1 |
| japan | kumamoto prefecture | mycobacterium avium | species | 0 | 1 |
| japan | kumamoto prefecture | mycobacterium avium complex | species | 0 | 1 |
| japan | kumamoto prefecture | mycobacterium avium-intracellulare | species | 0 | 1 |
| japan | kyoto prefecture | mycobacterium avium | species | 0 | 3 |
| japan | kyoto prefecture | mycobacterium avium complex | species | 0 | 3 |
| japan | kyoto prefecture | mycobacterium avium complex (mac) | species group | 0 | 2 |
| japan | kyoto prefecture | mycobacterium avium subsp. hominissuis | subspecies | 0 | 1 |
| japan | kyoto prefecture | mycobacterium avium-intracellulare | species | 0 | 2 |
| japan | nagano prefecture | mycobacterium avium complex | species | 1 | 0 |
| japan | nagasaki prefecture | mycobacterium avium | species | 0 | 1 |
| japan | nagasaki prefecture | mycobacterium avium complex | species | 0 | 1 |
| japan | nagasaki prefecture | mycobacterium avium-intracellulare | species | 0 | 1 |
| japan | nagasaki prefecture | mycobacterium intracellulare | species | 0 | 1 |
| japan | niigata prefecture | mycobacterium avium | species | 0 | 1 |
| japan | niigata prefecture | mycobacterium avium complex | species | 0 | 1 |
| japan | niigata prefecture | mycobacterium avium complex (mac) | species group | 0 | 1 |
| japan | niigata prefecture | mycobacterium intracellulare | species | 0 | 1 |
| japan | okayama prefecture | mycobacterium avium | species | 0 | 1 |
| japan | okayama prefecture | mycobacterium avium complex | species | 0 | 1 |
| japan | okayama prefecture | mycobacterium avium complex (mac) | species group | 0 | 1 |
| japan | okinawa prefecture | mycobacterium avium | species | 0 | 3 |
| japan | okinawa prefecture | mycobacterium avium complex | species | 0 | 2 |
| japan | okinawa prefecture | mycobacterium avium complex (mac) | species group | 0 | 2 |
| japan | osaka prefecture | mycobacterium avium | species | 4 | 5 |
| japan | osaka prefecture | mycobacterium avium complex | species | 0 | 3 |
| japan | osaka prefecture | mycobacterium avium complex (mac) | species group | 0 | 2 |
| japan | osaka prefecture | mycobacterium avium subsp. hominissuis | subspecies | 3210 | 0 |
| japan | osaka prefecture | mycobacterium avium-intracellulare | species | 0 | 3 |
| japan | osaka prefecture | mycobacterium intracellulare | species | 1 | 0 |
| japan | saitama prefecture | mycobacterium avium | species | 0 | 1 |
| japan | saitama prefecture | mycobacterium avium complex | species | 0 | 1 |
| japan | saitama prefecture | mycobacterium avium complex (mac) | species group | 0 | 1 |
| japan | shimane prefecture | mycobacterium avium | species | 0 | 1 |
| japan | shimane prefecture | mycobacterium avium complex | species | 0 | 1 |
| japan | shimane prefecture | mycobacterium avium complex (mac) | species group | 0 | 1 |
| japan | shimane prefecture | mycobacterium avium-intracellulare | species | 0 | 1 |
| japan | shimane prefecture | mycobacterium intracellulare | species | 0 | 1 |
| japan | tokyo prefecture | mycobacterium avium | species | 0 | 6 |
| japan | tokyo prefecture | mycobacterium avium complex | species | 5 | 3 |
| japan | tokyo prefecture | mycobacterium avium complex (mac) | species group | 0 | 2 |
| japan | tokyo prefecture | mycobacterium avium-intracellulare | species | 0 | 3 |
| japan | tokyo prefecture | mycobacterium chimaera | species | 1 | 0 |
| japan | toyama prefecture | mycobacterium avium subsp. hominissuis | subspecies | 2184 | 0 |
| kenya | | mycobacterium intracellulare | species | 2 | 0 |
| kenya | nairobi province | mycobacterium avium | species | 0 | 1 |
| kenya | nairobi province | mycobacterium avium complex | species | 0 | 1 |
| kenya | nairobi province | mycobacterium avium complex (mac) | species group | 0 | 1 |
| kenya | rift valley province | mycobacterium avium | species | 0 | 1 |
| kuwait | | mycobacterium intracellulare | species | 1 | 0 |
| malawi | central region | mycobacterium avium | species | 0 | 1 |
| malawi | central region | mycobacterium avium complex | species | 0 | 1 |
| malawi | central region | mycobacterium avium-intracellulare | species | 0 | 1 |
| malawi | northern region | mycobacterium avium | species | 0 | 1 |
| malawi | northern region | mycobacterium avium complex | species | 0 | 1 |
| malaysia | | mycobacterium avium | species | 6 | 0 |
| malaysia | | mycobacterium avium subsp. avium | subspecies | 2 | 0 |
| malaysia | | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| malaysia | | mycobacterium intracellulare | species | 1 | 0 |
| martinique | | mycobacterium avium | species | 0 | 1 |
| martinique | | mycobacterium avium complex | species | 0 | 1 |
| mayotte | | mycobacterium avium | species | 0 | 1 |
| mexico | | mycobacterium avium | species | 2 | 0 |
| mexico | | mycobacterium avium complex | species | 2 | 0 |
| mexico | | mycobacterium colombiense | species | 1 | 0 |
| mexico | | mycobacterium mantenii | species | 2 | 0 |
| mexico | chihuahua | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| mexico | federal district | mycobacterium avium | species | 0 | 1 |
| mexico | federal district | mycobacterium avium complex | species | 0 | 1 |
| micronesia | | mycobacterium chimaera | species | 1 | 0 |
| micronesia | | mycobacterium marseillense | species | 1 | 0 |
| micronesia | | mycobacterium timonense | species | 1 | 0 |
| mongolia | arkhangai province | mycobacterium avium | species | 0 | 1 |
| mongolia | ulaanbaatar province | mycobacterium avium | species | 0 | 1 |
| mozambique | | mycobacterium colombiense | species | 4952 | 0 |
| mozambique | | mycobacterium yongonense | species | 597 | 0 |
| myanmar | madalay | mycobacterium avium | species | 0 | 1 |
| nepal | central development region | mycobacterium avium | species | 0 | 2 |
| nepal | central development region | mycobacterium avium complex | species | 0 | 2 |
| netherlands | | mycobacterium avium | species | 4 | 0 |
| netherlands | | mycobacterium avium subsp. paratuberculosis | subspecies | 7 | 0 |
| netherlands | | mycobacterium mantenii | species | 6 | 0 |
| netherlands | | mycobacterium vulneris | species | 5 | 0 |
| netherlands | zeeland province | mycobacterium avium | species | 0 | 1 |
| new zealand | | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| new zealand | otago | mycobacterium avium | species | 0 | 1 |
| new zealand | otago | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| new zealand | southland | mycobacterium avium | species | 0 | 1 |
| new zealand | southland | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| new zealand | waikato | mycobacterium avium | species | 0 | 1 |
| nigeria | lagos | mycobacterium avium | species | 0 | 2 |
| norway | more og romsdal county | mycobacterium avium | species | 0 | 3 |
| norway | more og romsdal county | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| oman | dhofar governorate | mycobacterium avium | species | 0 | 1 |
| oman | masqat governorate | mycobacterium avium | species | 0 | 1 |
| oman | masqat governorate | mycobacterium avium complex | species | 0 | 1 |
| pakistan | punjab province | mycobacterium avium | species | 0 | 1 |
| pakistan | punjab province | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| poland | | mycobacterium avium | species | 5 | 0 |
| poland | | mycobacterium intracellulare | species | 1 | 0 |
| poland | podlasie province | mycobacterium avium | species | 0 | 1 |
| portugal | | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| portugal | acores autonomous region | mycobacterium avium subsp. paratuberculosis | subspecies | 222 | 0 |
| portugal | castelo branco district | mycobacterium avium | species | 0 | 1 |
| portugal | castelo branco district | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| portugal | lisboa district | mycobacterium avium | species | 0 | 2 |
| portugal | lisboa district | mycobacterium avium complex | species | 0 | 1 |
| portugal | setubal district | mycobacterium avium | species | 0 | 1 |
| puerto rico | | mycobacterium avium | species | 0 | 4 |
| puerto rico | | mycobacterium avium complex | species | 0 | 1 |
| puerto rico | | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| puerto rico | | mycobacterium avium-intracellulare | species | 0 | 1 |
| puerto rico | | mycobacterium intracellulare | species | 0 | 1 |
| reunion | | mycobacterium avium | species | 0 | 1 |
| reunion | | mycobacterium avium complex | species | 0 | 1 |
| russia | | mycobacterium avium subsp. hominissuis | subspecies | 3 | 0 |
| russia | irkutsk oblast | mycobacterium avium | species | 1 | 0 |
| russia | moscow city | mycobacterium avium | species | 1 | 0 |
| russia | moscow city | mycobacterium mantenii | species | 1 | 0 |
| russia | nizhny novgorod oblast | mycobacterium avium | species | 0 | 1 |
| russia | novosibirsk oblast | mycobacterium avium | species | 12 | 0 |
| russia | novosibirsk oblast | mycobacterium avium subsp. paratuberculosis | subspecies | 2 | 0 |
| russia | rostov oblast | mycobacterium avium | species | 0 | 1 |
| russia | saint petersburg | mycobacterium avium subsp. hominissuis | subspecies | 9 | 0 |
| samoa | | mycobacterium avium | species | 0 | 1 |
| samoa | | mycobacterium avium-intracellulare | species | 0 | 1 |
| samoa | | mycobacterium intracellulare | species | 0 | 1 |
| saudi arabia | riyadh region | mycobacterium avium | species | 0 | 1 |
| saudi arabia | riyadh region | mycobacterium avium complex | species | 0 | 1 |
| saudi arabia | riyadh region | mycobacterium avium complex (mac) | species group | 0 | 1 |
| singapore | | mycobacterium avium | species | 0 | 4 |
| singapore | | mycobacterium avium complex | species | 0 | 2 |
| slovakia | | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| slovakia | trnava region | mycobacterium avium | species | 0 | 1 |
| slovakia | trnava region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| slovenia | | mycobacterium intracellulare | species | 2 | 0 |
| south africa | | mycobacterium colombiense | species | 222 | 0 |
| south africa | | mycobacterium intracellulare | species | 356 | 0 |
| south africa | eastern cape province | mycobacterium avium | species | 0 | 1 |
| south africa | eastern cape province | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| south africa | gauteng province | mycobacterium avium | species | 0 | 1 |
| south africa | gauteng province | mycobacterium avium-intracellulare | species | 0 | 1 |
| south africa | kwazulu-natal province | mycobacterium intracellulare | species | 0 | 1 |
| south africa | the western cape province | mycobacterium avium | species | 0 | 2 |
| south africa | the western cape province | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| south korea | | mycobacterium avium | species | 156 | 0 |
| south korea | | mycobacterium avium subsp. hominissuis | subspecies | 3 | 0 |
| south korea | | mycobacterium bouchedurhonense | species | 6 | 0 |
| south korea | | mycobacterium chimaera | species | 16 | 0 |
| south korea | | mycobacterium colombiense | species | 40 | 0 |
| south korea | | mycobacterium intracellulare | species | 321 | 0 |
| south korea | | mycobacterium intracellulare atcc 13950 | no rank | 7 | 0 |
| south korea | | mycobacterium intracellulare mott-02 | no rank | 4 | 0 |
| south korea | | mycobacterium intracellulare mott-64 | no rank | 6 | 0 |
| south korea | | mycobacterium mantenii | species | 1 | 0 |
| south korea | | mycobacterium marseillense | species | 12 | 0 |
| south korea | | mycobacterium vulneris | species | 4 | 0 |
| south korea | | mycobacterium yongonense 05-1390 | no rank | 7 | 0 |
| south korea | north jeolla province | mycobacterium avium subsp. paratuberculosis | subspecies | 2 | 0 |
| south korea | seoul city | mycobacterium intracellulare atcc 13950 | no rank | 2 | 0 |
| south korea | seoul city | mycobacterium yongonense | species | 4 | 0 |
| south korea | south chungcheong province | mycobacterium avium subsp. paratuberculosis | subspecies | 11 | 0 |
| spain | | mycobacterium avium | species | 136 | 0 |
| spain | | mycobacterium avium subsp. avium | subspecies | 35 | 0 |
| spain | | mycobacterium avium subsp. hominissuis | subspecies | 15 | 0 |
| spain | | mycobacterium avium subsp. paratuberculosis | subspecies | 4 | 0 |
| spain | | mycobacterium colombiense cect 3035 | no rank | 2 | 0 |
| spain | | mycobacterium intracellulare | species | 2 | 0 |
| spain | asturias | mycobacterium avium | species | 0 | 1 |
| spain | asturias | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| spain | balearic islands | mycobacterium avium | species | 0 | 1 |
| spain | balearic islands | mycobacterium avium complex | species | 0 | 1 |
| spain | basque country | mycobacterium avium | species | 0 | 2 |
| spain | basque country | mycobacterium avium complex | species | 0 | 1 |
| spain | basque country | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| spain | basque country | mycobacterium avium-intracellulare | species | 0 | 1 |
| spain | canary islands | mycobacterium avium | species | 0 | 1 |
| spain | canary islands | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| spain | catalonia | mycobacterium avium | species | 0 | 3 |
| spain | catalonia | mycobacterium avium-intracellulare | species | 0 | 1 |
| spain | galicia | mycobacterium avium | species | 0 | 1 |
| spain | galicia | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| spain | madrid | mycobacterium avium | species | 0 | 4 |
| spain | madrid | mycobacterium avium complex | species | 0 | 1 |
| spain | madrid | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| spain | madrid | mycobacterium avium-intracellulare | species | 0 | 2 |
| spain | madrid | mycobacterium intracellulare | species | 3 | 0 |
| spain | valencia | mycobacterium avium | species | 0 | 1 |
| spain | valencia | mycobacterium avium-intracellulare | species | 0 | 1 |
| sri lanka | | mycobacterium avium complex | species | 1 | 0 |
| sri lanka | | mycobacterium intracellulare | species | 2 | 0 |
| sweden | stockholm | mycobacterium avium | species | 0 | 1 |
| switzerland | basel-stadt region | mycobacterium avium | species | 0 | 1 |
| switzerland | basel-stadt region | mycobacterium avium complex | species | 0 | 1 |
| switzerland | basel-stadt region | mycobacterium avium-intracellulare | species | 0 | 1 |
| switzerland | graubunden region | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| switzerland | zurich region | mycobacterium chimaera | species | 28 | 0 |
| taiwan | | mycobacterium avium | species | 0 | 28 |
| taiwan | | mycobacterium avium complex | species | 0 | 22 |
| taiwan | | mycobacterium avium complex (mac) | species group | 0 | 10 |
| taiwan | | mycobacterium avium subsp. hominissuis | subspecies | 143 | 0 |
| taiwan | | mycobacterium avium-intracellulare | species | 0 | 7 |
| taiwan | | mycobacterium colombiense | species | 0 | 1 |
| taiwan | | mycobacterium intracellulare | species | 0 | 2 |
| tanzania | | mycobacterium avium complex | species | 2 | 0 |
| tanzania | | mycobacterium intracellulare | species | 3 | 0 |
| tanzania | arusha region | mycobacterium intracellulare | species | 1 | 0 |
| tanzania | dar es salaam region | mycobacterium yongonense | species | 810 | 0 |
| tanzania | iringa region | mycobacterium intracellulare | species | 1 | 0 |
| tanzania | morogoro region | mycobacterium chimaera | species | 0 | 1 |
| thailand | bangkok | mycobacterium avium | species | 0 | 2 |
| thailand | bangkok | mycobacterium avium complex | species | 0 | 2 |
| thailand | bangkok | mycobacterium avium-intracellulare | species | 0 | 2 |
| thailand | phra nakhon si ayutthaya province | mycobacterium avium | species | 0 | 2 |
| thailand | phra nakhon si ayutthaya province | mycobacterium avium complex | species | 0 | 2 |
| thailand | phra nakhon si ayutthaya province | mycobacterium avium-intracellulare | species | 0 | 2 |
| trinidad and tobago | | mycobacterium avium | species | 0 | 2 |
| trinidad and tobago | | mycobacterium avium complex | species | 0 | 2 |
| turkey | afyonkarahisar province | mycobacterium avium | species | 0 | 1 |
| turkey | afyonkarahisar province | mycobacterium avium complex | species | 0 | 1 |
| turkey | agri province | mycobacterium avium | species | 0 | 1 |
| turkey | agri province | mycobacterium avium complex | species | 0 | 1 |
| uganda | | mycobacterium vulneris | species | 830 | 0 |
| uganda | central region | mycobacterium avium | species | 5 | 1 |
| uganda | central region | mycobacterium avium complex | species | 0 | 1 |
| uganda | central region | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| united kingdom | | mycobacterium avium subsp. paratuberculosis | subspecies | 2 | 0 |
| united kingdom | england | mycobacterium avium | species | 0 | 32 |
| united kingdom | england | mycobacterium avium complex | species | 0 | 7 |
| united kingdom | england | mycobacterium avium complex (mac) | species group | 0 | 2 |
| united kingdom | england | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 7 |
| united kingdom | england | mycobacterium avium-intracellulare | species | 0 | 6 |
| united kingdom | england | mycobacterium intracellulare | species | 0 | 1 |
| united kingdom | northern ireland | mycobacterium avium | species | 0 | 10 |
| united kingdom | northern ireland | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 5 |
| united kingdom | northern ireland | mycobacterium avium-intracellulare | species | 0 | 2 |
| united kingdom | scotland | mycobacterium avium | species | 0 | 15 |
| united kingdom | scotland | mycobacterium avium complex | species | 0 | 2 |
| united kingdom | scotland | mycobacterium avium complex (mac) | species group | 0 | 1 |
| united kingdom | scotland | mycobacterium avium subsp. avium | subspecies | 0 | 1 |
| united kingdom | scotland | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 9 |
| united kingdom | wales | mycobacterium avium | species | 0 | 15 |
| united kingdom | wales | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 5 |
| united kingdom | wales | mycobacterium avium-intracellulare | species | 0 | 4 |
| united states | | mycobacterium avium | species | 2985 | 0 |
| united states | | mycobacterium avium 05-4293 | no rank | 382 | 0 |
| united states | | mycobacterium avium mav_061107_1842 | no rank | 34 | 0 |
| united states | | mycobacterium avium mav_120709_2344 | no rank | 126 | 0 |
| united states | | mycobacterium avium mav_120809_2495 | no rank | 196 | 0 |
| united states | | mycobacterium avium subsp. avium 2285 (r) | no rank | 10 | 0 |
| united states | | mycobacterium avium subsp. avium 2285 (s) | no rank | 16 | 0 |
| united states | | mycobacterium avium subsp. hominissuis | subspecies | 781 | 0 |
| united states | | mycobacterium avium subsp. hominissuis 100 | no rank | 682 | 0 |
| united states | | mycobacterium avium subsp. hominissuis 101 | no rank | 314 | 0 |
| united states | | mycobacterium avium subsp. hominissuis 3388 | no rank | 258 | 0 |
| united states | | mycobacterium avium subsp. hominissuis a5 | no rank | 102 | 0 |
| united states | | mycobacterium avium subsp. paratuberculosis | subspecies | 7 | 0 |
| united states | | mycobacterium avium subsp. paratuberculosis s397 | no rank | 356 | 0 |
| united states | | mycobacterium chimaera | species | 331 | 0 |
| united states | | mycobacterium colombiense | species | 2 | 0 |
| united states | | mycobacterium intracellulare | species | 217 | 0 |
| united states | | mycobacterium intracellulare 1956 | no rank | 8 | 0 |
| united states | | mycobacterium intracellulare min_052511_1280 | no rank | 94 | 0 |
| united states | | mycobacterium intracellulare min_061107_1834 | no rank | 86 | 0 |
| united states | | mycobacterium intracellulare mott-02 | no rank | 1 | 0 |
| united states | | mycobacterium marseillense | species | 9 | 0 |
| united states | | mycobacterium sp. mac_011194_8550 | species | 336 | 0 |
| united states | | mycobacterium sp. mac_080597_8934 | species | 122 | 0 |
| united states | | mycobacterium timonense | species | 4 | 0 |
| united states | | mycobacterium yongonense | species | 2 | 0 |
| united states | alabama | mycobacterium avium | species | 0 | 5 |
| united states | alabama | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| united states | alabama | mycobacterium avium-intracellulare | species | 0 | 1 |
| united states | arizona | mycobacterium avium | species | 0 | 3 |
| united states | arizona | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | arkansas | mycobacterium avium | species | 0 | 3 |
| united states | arkansas | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| united states | arkansas | mycobacterium avium-intracellulare | species | 0 | 1 |
| united states | california | mycobacterium avium | species | 0 | 34 |
| united states | california | mycobacterium avium complex | species | 0 | 17 |
| united states | california | mycobacterium avium complex (mac) | species group | 0 | 6 |
| united states | california | mycobacterium avium subsp. avium | subspecies | 0 | 1 |
| united states | california | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 14 |
| united states | california | mycobacterium avium-intracellulare | species | 0 | 1 |
| united states | california | mycobacterium intracellulare | species | 0 | 1 |
| united states | colorado | mycobacterium avium | species | 0 | 9 |
| united states | colorado | mycobacterium avium complex | species | 0 | 2 |
| united states | colorado | mycobacterium avium subsp. hominissuis 10-4249 | no rank | 1850 | 0 |
| united states | colorado | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 4 |
| united states | colorado | mycobacterium avium subsp. paratuberculosis 10-5975 | no rank | 2514 | 0 |
| united states | colorado | mycobacterium avium subsp. paratuberculosis 11-1786 | no rank | 2618 | 0 |
| united states | connecticut | mycobacterium avium | species | 0 | 3 |
| united states | connecticut | mycobacterium avium complex | species | 0 | 3 |
| united states | district of columbia | mycobacterium avium | species | 0 | 1 |
| united states | district of columbia | mycobacterium avium complex | species | 0 | 1 |
| united states | florida | mycobacterium avium | species | 0 | 14 |
| united states | florida | mycobacterium avium complex | species | 0 | 2 |
| united states | florida | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 8 |
| united states | florida | mycobacterium avium-intracellulare | species | 0 | 2 |
| united states | florida | mycobacterium intracellulare | species | 0 | 1 |
| united states | georgia | mycobacterium avium | species | 0 | 15 |
| united states | georgia | mycobacterium avium complex | species | 0 | 4 |
| united states | georgia | mycobacterium avium complex (mac) | species group | 0 | 1 |
| united states | georgia | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | georgia | mycobacterium avium-intracellulare | species | 0 | 8 |
| united states | georgia | mycobacterium intracellulare | species | 0 | 1 |
| united states | hawaii | mycobacterium chimaera | species | 8 | 0 |
| united states | idaho | mycobacterium avium | species | 0 | 2 |
| united states | idaho | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | idaho | mycobacterium avium subsp. paratuberculosis 10-4404 | no rank | 1094 | 0 |
| united states | illinois | mycobacterium avium | species | 0 | 2 |
| united states | illinois | mycobacterium avium complex | species | 0 | 2 |
| united states | illinois | mycobacterium avium complex (mac) | species group | 0 | 1 |
| united states | illinois | mycobacterium avium-intracellulare | species | 0 | 1 |
| united states | indiana | mycobacterium avium | species | 0 | 1 |
| united states | indiana | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | iowa | mycobacterium avium | species | 0 | 2 |
| united states | iowa | mycobacterium avium 10-5560 | no rank | 1820 | 0 |
| united states | iowa | mycobacterium avium 11-0986 | no rank | 1812 | 0 |
| united states | iowa | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 2 |
| united states | iowa | mycobacterium avium subsp. paratuberculosis 08-8281 | no rank | 932 | 0 |
| united states | iowa | mycobacterium avium subsp. paratuberculosis 10-5864 | no rank | 1136 | 0 |
| united states | kansas | mycobacterium avium | species | 0 | 3 |
| united states | kansas | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| united states | kentucky | mycobacterium avium | species | 0 | 2 |
| united states | kentucky | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| united states | louisiana | mycobacterium avium | species | 0 | 5 |
| united states | louisiana | mycobacterium avium 10-5581 | no rank | 652 | 0 |
| united states | louisiana | mycobacterium avium complex | species | 0 | 4 |
| united states | louisiana | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | maine | mycobacterium avium | species | 0 | 1 |
| united states | maine | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | maryland | mycobacterium avium | species | 0 | 6 |
| united states | maryland | mycobacterium avium complex | species | 0 | 2 |
| united states | maryland | mycobacterium avium complex (mac) | species group | 0 | 1 |
| united states | maryland | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | maryland | mycobacterium avium-intracellulare | species | 0 | 2 |
| united states | massachusetts | mycobacterium avium | species | 0 | 7 |
| united states | massachusetts | mycobacterium avium complex | species | 0 | 5 |
| united states | massachusetts | mycobacterium avium complex (mac) | species group | 0 | 1 |
| united states | massachusetts | mycobacterium avium-intracellulare | species | 0 | 1 |
| united states | michigan | mycobacterium avium | species | 0 | 11 |
| united states | michigan | mycobacterium avium complex | species | 0 | 1 |
| united states | michigan | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 9 |
| united states | minnesota | mycobacterium avium | species | 0 | 20 |
| united states | minnesota | mycobacterium avium 09-5983 | no rank | 2228 | 0 |
| united states | minnesota | mycobacterium avium subsp. avium 10-9275 | no rank | 1774 | 0 |
| united states | minnesota | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 17 |
| united states | mississippi | mycobacterium avium | species | 0 | 3 |
| united states | mississippi | mycobacterium avium complex | species | 0 | 1 |
| united states | mississippi | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | mississippi | mycobacterium avium-intracellulare | species | 0 | 1 |
| united states | missouri | mycobacterium avium | species | 3236 | 3 |
| united states | missouri | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| united states | missouri | mycobacterium chimaera | species | 372 | 0 |
| united states | missouri | mycobacterium intracellulare | species | 1471 | 0 |
| united states | missouri | mycobacterium marseillense | species | 77 | 0 |
| united states | montana | mycobacterium avium subsp. paratuberculosis | subspecies | 1 | 0 |
| united states | nebraska | mycobacterium avium | species | 0 | 2 |
| united states | nebraska | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | nevada | mycobacterium intracellulare | species | 0 | 1 |
| united states | new hampshire | mycobacterium avium | species | 0 | 4 |
| united states | new hampshire | mycobacterium avium complex | species | 0 | 4 |
| united states | new hampshire | mycobacterium avium-intracellulare | species | 0 | 1 |
| united states | new hampshire | mycobacterium intracellulare | species | 0 | 1 |
| united states | new jersey | mycobacterium avium | species | 0 | 1 |
| united states | new mexico | mycobacterium avium | species | 0 | 2 |
| united states | new mexico | mycobacterium avium complex | species | 0 | 1 |
| united states | new mexico | mycobacterium avium complex (mac) | species group | 0 | 1 |
| united states | new mexico | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | new york | mycobacterium avium | species | 0 | 20 |
| united states | new york | mycobacterium avium complex | species | 0 | 6 |
| united states | new york | mycobacterium avium complex (mac) | species group | 0 | 2 |
| united states | new york | mycobacterium avium subsp. hominissuis | subspecies | 9 | 0 |
| united states | new york | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 5 |
| united states | new york | mycobacterium avium-intracellulare | species | 0 | 4 |
| united states | north carolina | mycobacterium avium | species | 0 | 4 |
| united states | north carolina | mycobacterium avium complex | species | 0 | 2 |
| united states | north carolina | mycobacterium avium subsp. hominissuis 10-5606 | no rank | 3382 | 0 |
| united states | north carolina | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | north dakota | mycobacterium avium | species | 0 | 1 |
| united states | north dakota | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | ohio | mycobacterium avium | species | 0 | 3 |
| united states | ohio | mycobacterium avium complex | species | 0 | 1 |
| united states | ohio | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 3 |
| united states | ohio | mycobacterium avium subsp. paratuberculosis 10-8425 | no rank | 1500 | 0 |
| united states | oregon | mycobacterium avium | species | 0 | 9 |
| united states | oregon | mycobacterium avium complex | species | 0 | 4 |
| united states | oregon | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | oregon | mycobacterium avium-intracellulare | species | 0 | 1 |
| united states | pennsylvania | mycobacterium avium | species | 0 | 10 |
| united states | pennsylvania | mycobacterium avium complex | species | 0 | 1 |
| united states | pennsylvania | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 7 |
| united states | pennsylvania | mycobacterium chimaera | species | 8 | 1 |
| united states | south carolina | mycobacterium avium | species | 0 | 5 |
| united states | south carolina | mycobacterium avium complex | species | 0 | 1 |
| united states | south carolina | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | south carolina | mycobacterium avium-intracellulare | species | 0 | 2 |
| united states | south carolina | mycobacterium intracellulare | species | 0 | 1 |
| united states | south dakota | mycobacterium avium | species | 0 | 1 |
| united states | tennessee | mycobacterium avium | species | 0 | 1 |
| united states | tennessee | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | texas | mycobacterium avium | species | 0 | 10 |
| united states | texas | mycobacterium avium complex | species | 0 | 5 |
| united states | texas | mycobacterium avium complex (mac) | species group | 0 | 1 |
| united states | texas | mycobacterium avium subsp. avium | subspecies | 2 | 0 |
| united states | texas | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 3 |
| united states | texas | mycobacterium avium-intracellulare | species | 0 | 1 |
| united states | texas | mycobacterium intracellulare | species | 0 | 1 |
| united states | utah | mycobacterium avium | species | 0 | 2 |
| united states | utah | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| united states | vermont | mycobacterium avium | species | 0 | 3 |
| united states | vermont | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 3 |
| united states | virginia | mycobacterium avium | species | 0 | 7 |
| united states | virginia | mycobacterium avium complex | species | 0 | 2 |
| united states | virginia | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 2 |
| united states | virginia | mycobacterium avium-intracellulare | species | 0 | 2 |
| united states | washington | mycobacterium avium | species | 0 | 1 |
| united states | washington | mycobacterium avium complex | species | 0 | 1 |
| united states | west virginia | mycobacterium avium | species | 0 | 2 |
| united states | west virginia | mycobacterium avium complex | species | 0 | 1 |
| united states | west virginia | mycobacterium avium subsp. paratuberculosis | subspecies | 0 | 1 |
| united states | wisconsin | mycobacterium avium | species | 0 | 11 |
| united states | wisconsin | mycobacterium avium subsp. avium 11-4751 | no rank | 1156 | 0 |
| united states | wisconsin | mycobacterium avium subsp. paratuberculosis | subspecies | 2 | 10 |
| uruguay | montevideo department | mycobacterium avium | species | 0 | 1 |
| uruguay | montevideo department | mycobacterium avium complex | species | 0 | 1 |
| zambia | | mycobacterium mantenii | species | 4 | 0 |
| zambia | lusaka province | mycobacterium avium | species | 0 | 1 |
| zimbabwe | harare province | mycobacterium avium | species | 0 | 1 |
| zimbabwe | harare province | mycobacterium avium complex | species | 0 | 1 |