| argentina | | bovine coronavirus | no rank | 9 | 0 |
| argentina | | porcine hemagglutinating encephalomyelitis virus | no rank | 1 | 0 |
| australia | | human coronavirus oc43 | no rank | 18 | 0 |
| australia | new south wales | human coronavirus oc43 | no rank | 0 | 1 |
| australia | victoria | human coronavirus oc43 | no rank | 0 | 3 |
| austria | | bovine coronavirus | no rank | 2 | 0 |
| austria | | equine coronavirus | no rank | 4 | 0 |
| austria | lower austria | bovine coronavirus | no rank | 0 | 1 |
| austria | styria | bovine coronavirus | no rank | 0 | 1 |
| bangladesh | | betacoronavirus 1 | species | 2 | 0 |
| bangladesh | | human coronavirus oc43 | no rank | 10 | 0 |
| belgium | | human coronavirus oc43 | no rank | 7 | 0 |
| belgium | | porcine hemagglutinating encephalomyelitis virus | no rank | 2 | 0 |
| brazil | | betacoronavirus 1 | species | 129 | 0 |
| brazil | | bovine coronavirus | no rank | 104 | 0 |
| brazil | | bovine coronavirus cow/wdbr-1005/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-1275/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-54/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-729/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-841/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-887/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-9146/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-9215/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-9224/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-923/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-96/bra/2003 | no rank | 1 | 0 |
| brazil | | bovine coronavirus cow/wdbr-978/bra/2003 | no rank | 1 | 0 |
| brazil | parana | bovine coronavirus | no rank | 0 | 1 |
| brazil | sao paulo | bovine coronavirus | no rank | 0 | 1 |
| cambodia | | betacoronavirus 1 | species | 1 | 0 |
| cambodia | | bovine coronavirus | no rank | 1 | 0 |
| cambodia | | canine respiratory coronavirus | no rank | 1 | 0 |
| cameroon | | human coronavirus oc43 | no rank | 1 | 0 |
| canada | | bovine coronavirus | no rank | 2 | 0 |
| canada | british columbia | canine respiratory coronavirus | no rank | 0 | 1 |
| canada | ontario | bovine coronavirus | no rank | 0 | 3 |
| canada | quebec | bovine coronavirus | no rank | 0 | 3 |
| china | | betacoronavirus 1 | species | 2 | 0 |
| china | | bovine coronavirus | no rank | 169 | 0 |
| china | | canine respiratory coronavirus | no rank | 9 | 0 |
| china | | equine coronavirus | no rank | 2 | 0 |
| china | | human coronavirus oc43 | no rank | 270 | 0 |
| china | | porcine hemagglutinating encephalomyelitis virus | no rank | 26 | 0 |
| china | | yak coronavirus | no rank | 134 | 0 |
| china | beijing | canine respiratory coronavirus | no rank | 0 | 1 |
| china | beijing | human coronavirus oc43 | no rank | 409 | 2 |
| china | guangdong | human coronavirus oc43 | no rank | 2 | 0 |
| china | heilongjiang | human coronavirus oc43 | no rank | 2 | 0 |
| china | inner mongolia | human coronavirus oc43 | no rank | 2 | 0 |
| china | jilin | porcine hemagglutinating encephalomyelitis virus | no rank | 1 | 3 |
| china | xinjiang | bovine coronavirus | no rank | 6 | 0 |
| croatia | | bovine coronavirus | no rank | 32 | 0 |
| czech republic | | porcine hemagglutinating encephalomyelitis virus | no rank | 10 | 0 |
| democratic republic of the congo | | human coronavirus oc43 | no rank | 8 | 0 |
| denmark | | bovine coronavirus | no rank | 22 | 0 |
| egypt | | betacoronavirus 1 | species | 4 | 0 |
| egypt | | bovine coronavirus | no rank | 7 | 0 |
| egypt | menoufia governorate | bovine coronavirus | no rank | 1 | 0 |
| ethiopia | | dromedary camel coronavirus hku23 | no rank | 7 | 0 |
| ethiopia | | human coronavirus oc43 | no rank | 4 | 0 |
| finland | | human coronavirus oc43 | no rank | 1 | 0 |
| france | | bovine coronavirus | no rank | 50 | 0 |
| france | | equine coronavirus | no rank | 10 | 0 |
| france | | human coronavirus oc43 | no rank | 50 | 0 |
| france | haute-normandie region | bovine coronavirus | no rank | 1 | 0 |
| france | haute-normandie region | human coronavirus oc43 | no rank | 8 | 0 |
| france | ile-de-france region | human coronavirus oc43 | no rank | 1 | 0 |
| germany | | bovine coronavirus | no rank | 3 | 0 |
| germany | | human enteric coronavirus 4408 | no rank | 1 | 0 |
| ghana | | bovine coronavirus | no rank | 4 | 0 |
| ghana | | human coronavirus oc43 | no rank | 18 | 0 |
| greece | | human coronavirus oc43 | no rank | 2 | 0 |
| hong kong | | betacoronavirus 1 | species | 2 | 0 |
| hong kong | | bovine coronavirus | no rank | 0 | 1 |
| hong kong | | human coronavirus oc43 | no rank | 3 | 2 |
| india | | bovine coronavirus | no rank | 16 | 0 |
| india | | human coronavirus oc43 | no rank | 1 | 0 |
| india | punjab | bovine coronavirus | no rank | 1 | 0 |
| indonesia | | betacoronavirus 1 | species | 1 | 0 |
| indonesia | | human coronavirus oc43 | no rank | 2 | 0 |
| iran | | bovine coronavirus | no rank | 23 | 0 |
| iran | fars province | bovine coronavirus | no rank | 2 | 0 |
| iran | zanjan province | bovine coronavirus | no rank | 1 | 0 |
| ireland | | bovine coronavirus | no rank | 38 | 0 |
| israel | | betacoronavirus 1 | species | 22 | 0 |
| israel | | bovine coronavirus | no rank | 4 | 0 |
| italy | | bovine coronavirus | no rank | 5 | 0 |
| italy | | bovine coronavirus bubalus/153/ita/2008 | no rank | 1 | 0 |
| italy | | bovine coronavirus bubalus/155/ita/2008 | no rank | 1 | 0 |
| italy | | bovine coronavirus bubalus/339/ita/2007 | no rank | 1 | 0 |
| italy | | bovine coronavirus bubalus/82/ita/2008 | no rank | 1 | 0 |
| italy | | bovine coronavirus bubalus/italy/179/07-11 | no rank | 1 | 0 |
| italy | | canine respiratory coronavirus | no rank | 2 | 0 |
| italy | | porcine hemagglutinating encephalomyelitis virus | no rank | 5 | 0 |
| italy | apulia region | bovine coronavirus | no rank | 0 | 1 |
| italy | apulia region | canine respiratory coronavirus | no rank | 0 | 1 |
| italy | lombardy region | human coronavirus oc43 | no rank | 0 | 1 |
| ivory coast | | human coronavirus oc43 | no rank | 9 | 0 |
| japan | | bovine coronavirus | no rank | 289 | 0 |
| japan | aichi prefecture | bovine coronavirus | no rank | 0 | 2 |
| japan | fukushima prefecture | human coronavirus oc43 | no rank | 10 | 0 |
| japan | hokkaido prefecture | bovine coronavirus | no rank | 0 | 1 |
| japan | hokkaido prefecture | equine coronavirus | no rank | 12 | 1 |
| japan | mie prefecture | human coronavirus oc43 | no rank | 0 | 1 |
| japan | miyagi ken prefecture | bovine coronavirus | no rank | 0 | 1 |
| japan | miyagi ken prefecture | human coronavirus oc43 | no rank | 0 | 1 |
| japan | miyagi ken prefecture | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| japan | niigata prefecture | bovine coronavirus | no rank | 0 | 1 |
| japan | niigata prefecture | human coronavirus oc43 | no rank | 20 | 0 |
| japan | osaka prefecture | bovine coronavirus | no rank | 0 | 1 |
| japan | tokyo prefecture | equine coronavirus | no rank | 1 | 0 |
| japan | tokyo prefecture | human coronavirus oc43 | no rank | 5 | 0 |
| japan | yamagata prefecture | bovine coronavirus | no rank | 0 | 1 |
| japan | yamagata prefecture | human coronavirus oc43 | no rank | 223 | 1 |
| jordan | | human coronavirus oc43 | no rank | 6 | 0 |
| kenya | | human coronavirus oc43 | no rank | 13 | 0 |
| kenya | coast province | human coronavirus oc43 | no rank | 40 | 0 |
| luxembourg | | betacoronavirus 1 | species | 4 | 1 |
| malaysia | | human coronavirus oc43 | no rank | 73 | 0 |
| malaysia | kuala lumpur | human coronavirus oc43 | no rank | 16 | 2 |
| mexico | | human coronavirus oc43 | no rank | 1 | 0 |
| morocco | | dromedary camel coronavirus hku23 | no rank | 7 | 0 |
| netherlands | | human coronavirus oc43 | no rank | 14 | 0 |
| netherlands | | porcine hemagglutinating encephalomyelitis virus | no rank | 1 | 0 |
| netherlands | north holland province | human coronavirus oc43 | no rank | 0 | 1 |
| new zealand | | canine respiratory coronavirus | no rank | 1 | 0 |
| nigeria | | dromedary camel coronavirus hku23 | no rank | 4 | 0 |
| norway | more og romsdal county | bovine coronavirus | no rank | 0 | 1 |
| norway | more og romsdal county | human coronavirus oc43 | no rank | 0 | 1 |
| philippines | calabarzon region | human coronavirus oc43 | no rank | 1 | 0 |
| poland | | bovine coronavirus | no rank | 20 | 0 |
| portugal | | bovine coronavirus up1/prt/2005 | no rank | 1 | 0 |
| portugal | | bovine coronavirus up2/prt/2005 | no rank | 1 | 0 |
| republic of the congo | | betacoronavirus 1 | species | 4 | 0 |
| saudi arabia | | coronavirus hku23 | no rank | 1 | 0 |
| saudi arabia | | equine coronavirus | no rank | 4 | 0 |
| saudi arabia | riyadh region | bovine coronavirus | no rank | 0 | 1 |
| senegal | | human coronavirus oc43 | no rank | 6 | 0 |
| singapore | | human coronavirus oc43 | no rank | 1 | 1 |
| slovakia | | bovine coronavirus | no rank | 2 | 0 |
| slovenia | | bovine coronavirus | no rank | 24 | 0 |
| slovenia | | human coronavirus oc43 | no rank | 3 | 0 |
| south korea | | bovine coronavirus | no rank | 167 | 0 |
| south korea | | canine respiratory coronavirus | no rank | 7 | 0 |
| south korea | | porcine hemagglutinating encephalomyelitis virus | no rank | 23 | 0 |
| south korea | south chungcheong province | water deer coronavirus | no rank | 26 | 0 |
| sweden | | bovine coronavirus | no rank | 81 | 0 |
| sweden | | human coronavirus oc43 | no rank | 38 | 0 |
| sweden | blekinge | bovine coronavirus | no rank | 0 | 1 |
| sweden | dalarna | bovine coronavirus | no rank | 0 | 1 |
| sweden | kronoberg | bovine coronavirus | no rank | 0 | 1 |
| sweden | skane | bovine coronavirus | no rank | 0 | 1 |
| sweden | varmland | bovine coronavirus | no rank | 0 | 1 |
| switzerland | | equine coronavirus | no rank | 2 | 0 |
| taiwan | | canine respiratory coronavirus | no rank | 1 | 0 |
| taiwan | | human coronavirus oc43 | no rank | 15 | 0 |
| taiwan | | human enteric coronavirus strain 4408 | no rank | 2 | 0 |
| tanzania | | human coronavirus oc43 | no rank | 5 | 0 |
| thailand | | betacoronavirus 1 | species | 1 | 0 |
| thailand | | bovine coronavirus | no rank | 4 | 0 |
| thailand | | human coronavirus oc43 | no rank | 43 | 0 |
| thailand | | porcine hemagglutinating encephalomyelitis virus | no rank | 2 | 0 |
| turkey | | bovine coronavirus | no rank | 36 | 0 |
| turkey | amasya province | bovine coronavirus | no rank | 0 | 1 |
| uganda | | betacoronavirus 1 | species | 1 | 0 |
| united arab emirates | | betacoronavirus 1 | species | 1 | 0 |
| united arab emirates | dubai | dromedary camel coronavirus hku23 | no rank | 3 | 0 |
| united kingdom | | canine respiratory coronavirus | no rank | 1 | 0 |
| united kingdom | | human coronavirus oc43 | no rank | 1 | 0 |
| united kingdom | england | bovine coronavirus | no rank | 0 | 2 |
| united kingdom | england | canine respiratory coronavirus | no rank | 0 | 2 |
| united kingdom | wales | bovine coronavirus | no rank | 0 | 1 |
| united states | | bovine coronavirus | no rank | 28 | 0 |
| united states | | bovine coronavirus isolate alpaca | no rank | 1 | 0 |
| united states | | canine respiratory coronavirus | no rank | 7 | 0 |
| united states | | human coronavirus oc43 | no rank | 74 | 0 |
| united states | | porcine hemagglutinating encephalomyelitis virus | no rank | 12 | 0 |
| united states | arizona | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | arkansas | human coronavirus oc43 | no rank | 19 | 0 |
| united states | california | bovine coronavirus | no rank | 3 | 1 |
| united states | california | human coronavirus oc43 | no rank | 0 | 1 |
| united states | colorado | bovine coronavirus | no rank | 1 | 0 |
| united states | florida | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | georgia | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | hawaii | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | illinois | bovine coronavirus | no rank | 0 | 1 |
| united states | indiana | bovine coronavirus | no rank | 0 | 1 |
| united states | iowa | bovine coronavirus | no rank | 0 | 1 |
| united states | iowa | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | kansas | bovine coronavirus | no rank | 1 | 0 |
| united states | kentucky | equine coronavirus | no rank | 0 | 1 |
| united states | maine | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | massachusetts | bovine coronavirus | no rank | 0 | 1 |
| united states | michigan | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | minnesota | bovine coronavirus | no rank | 2 | 1 |
| united states | nebraska | bovine coronavirus | no rank | 62 | 3 |
| united states | new hampshire | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | new mexico | human coronavirus oc43 | no rank | 5 | 0 |
| united states | north carolina | bovine coronavirus | no rank | 0 | 1 |
| united states | ohio | bovine coronavirus | no rank | 0 | 3 |
| united states | ohio | bovine coronavirus e-ah187 | no rank | 1 | 0 |
| united states | ohio | bovine coronavirus e-ah187-tc | no rank | 1 | 0 |
| united states | ohio | bovine coronavirus e-ah65 | no rank | 1 | 0 |
| united states | ohio | bovine coronavirus e-ah65-tc | no rank | 1 | 0 |
| united states | ohio | bovine coronavirus e-db2-tc | no rank | 1 | 0 |
| united states | ohio | bovine coronavirus r-ah187 | no rank | 1 | 0 |
| united states | ohio | bovine coronavirus r-ah65 | no rank | 1 | 0 |
| united states | ohio | bovine coronavirus r-ah65-tc | no rank | 1 | 0 |
| united states | ohio | bovine respiratory coronavirus ah187 | no rank | 2 | 0 |
| united states | ohio | bovine respiratory coronavirus bovine/us/oh-440-tc/1996 | no rank | 2 | 0 |
| united states | ohio | calf-giraffe coronavirus us/oh3/2006 | no rank | 1 | 0 |
| united states | ohio | giraffe coronavirus us/oh3/2003 | no rank | 1 | 0 |
| united states | ohio | giraffe coronavirus us/oh3-tc/2006 | no rank | 1 | 0 |
| united states | ohio | sable antelope coronavirus us/oh1/2003 | no rank | 1 | 0 |
| united states | ohio | sambar deer coronavirus us/oh-wd388/1994 | no rank | 1 | 0 |
| united states | ohio | sambar deer coronavirus us/oh-wd388-tc/1994 | no rank | 2 | 0 |
| united states | ohio | waterbuck coronavirus us/oh-wd358/1994 | no rank | 1 | 0 |
| united states | ohio | waterbuck coronavirus us/oh-wd358-gnc/1994 | no rank | 1 | 0 |
| united states | ohio | waterbuck coronavirus us/oh-wd358-tc/1994 | no rank | 1 | 0 |
| united states | ohio | white-tailed deer coronavirus us/oh-wd470/1994 | no rank | 1 | 0 |
| united states | oklahoma | betacoronavirus 1 | species | 0 | 1 |
| united states | oklahoma | bovine coronavirus | no rank | 0 | 1 |
| united states | oregon | bovine coronavirus | no rank | 1 | 0 |
| united states | oregon | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | pennsylvania | bovine coronavirus | no rank | 5 | 0 |
| united states | south dakota | bovine coronavirus | no rank | 0 | 1 |
| united states | tennessee | human coronavirus oc43 | no rank | 41 | 0 |
| united states | texas | bovine coronavirus | no rank | 3 | 0 |
| united states | vermont | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | virginia | bovine coronavirus | no rank | 0 | 1 |
| united states | virginia | human coronavirus oc43 | no rank | 0 | 1 |
| united states | washington | porcine hemagglutinating encephalomyelitis virus | no rank | 0 | 1 |
| united states | wisconsin | bovine coronavirus | no rank | 1 | 0 |
| united states | wyoming | bovine coronavirus | no rank | 1 | 0 |
| uruguay | | bovine coronavirus | no rank | 30 | 0 |
| vietnam | | bovine coronavirus | no rank | 32 | 0 |
| vietnam | | porcine hemagglutinating encephalomyelitis virus | no rank | 83 | 0 |