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inferring the ecological niche of bat viruses closely related to sars-cov-2 using phylogeographic analyses of rhinolophus species.the severe acute respiratory syndrome coronavirus 2 (sars-cov-2) is the causal agent of the coronavirus disease 2019 (covid-19) pandemic. to date, viruses closely related to sars-cov-2 have been reported in four bat species: rhinolophus acuminatus, rhinolophus affinis, rhinolophus malayanus, and rhinolophus shameli. here, we analysed 343 sequences of the mitochondrial cytochrome c oxidase subunit 1 gene (co1) from georeferenced bats of the four rhinolophus species identified as reservoirs of vir ...202134253798
evidence for sars-cov-2 related coronaviruses circulating in bats and pangolins in southeast asia.among the many questions unanswered for the covid-19 pandemic are the origin of sars-cov-2 and the potential role of intermediate animal host(s) in the early animal-to-human transmission. the discovery of ratg13 bat coronavirus in china suggested a high probability of a bat origin. here we report molecular and serological evidence of sars-cov-2 related coronaviruses (sc2r-covs) actively circulating in bats in southeast asia. whole genome sequences were obtained from five independent bats (rhinol ...202133563978
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