| reclassification of cellulosimicrobium variabile bakalidou et al. 2002 as isoptericola variabilis gen. nov., comb. nov. | as already depicted in the original publication, the type strain of the species cellulosimicrobium variabile bakalidou et al. 2002, dsm 10177(t), does not cluster unambiguously with the type species, cellulosimicrobium cellulans dsm 43879(t), in phylogenetic analysis. strain dsm 10177(t) is moderately related to the recently described species xylanimonas cellulosilytica, promicromonospora pachnodae and xylanibacterium ulmi, forming a lineage that branches between c. cellulans and members of the ... | 2004 | 15143008 |
| reclassification of promicromonospora pachnodae cazemier et al. 2004 as xylanimicrobium pachnodae gen. nov., comb. nov. | the recently described facultatively anaerobic promicromonospora pachnodae is phylogenetically only moderately related to authentic members of promicromonospora. p. pachnodae is closely related to xylanibacterium ulmi and slightly less closely related to xylanimonas cellulosilytica and isoptericola variabilis (basonym cellulosimicrobium variabile). members of the different genera of promicromonosporaceae have similar chemotaxonomic properties; they share the same peptidoglycan type (a4alpha) and ... | 2004 | 15280318 |
| isoptericola hypogeus sp. nov., isolated from the roman catacomb of domitilla. | in order to clarify the taxonomic position of an actinobacterium from the roman catacomb of domitilla, a combination of phenotypic characterization, phylogenetic analysis based on the 16s rrna gene sequence and dna-dna relatedness studies was used. the results from the polyphasic taxonomic study of this organism showed that strain hki 0342(t) (=dsm 16849(t)=ncimb 14033(t)) should be considered as the type strain of a novel species of the genus isoptericola, for which the name isoptericola hypoge ... | 2005 | 16014507 |
| isoptericola halotolerans sp. nov., a novel actinobacterium isolated from saline soil from qinghai province, north-west china. | a gram-positive, non-motile actinobacterium, designated strain yim 70177(t), was isolated from a saline soil sample from qinghai province, north-west china. phylogenetic analysis of this organism based on 16s rrna gene sequences revealed 98.3% similarity to isoptericola variabilis dsm 10177(t). chemotaxonomic data determined for the isolate, such as the peptidoglycan type a4alpha, variation l-lys-d-asp, supported the placement of strain yim 70177(t) within the genus isoptericola. galactose was d ... | 2005 | 16166680 |
| isoptericola dokdonensis sp. nov., isolated from soil. | a gram-positive, non-motile, rod- or coccoid-shaped isoptericola-like bacterium, strain ds-3(t), was isolated from a soil sample from dokdo, korea, and its taxonomic position was investigated by a polyphasic approach. the organism grew optimally at 30 degrees c and ph 7.0-8.0. strain ds-3(t) had the peptidoglycan type based on l-lys-d-asp, and galactose, glucose, rhamnose and ribose as the whole-cell sugars. it contained mk-9(h(4)) as the predominant menaquinone and anteiso-c(15 : 0) and iso-c(1 ... | 2006 | 17158994 |
| alkaliphilic and halophilic hydrocarbon-utilizing bacteria from kuwaiti coasts of the arabian gulf. | green animate materials from the intertidal zone of the arabian gulf coast accommodated more alkaliphilic and halophilic bacteria than inanimate materials. the alkaliphilic oil-utilizing bacteria, as identified by their 16s ribonucleic acid sequences, belonged to the following genera arranged in decreasing frequences: marinobacter, micrococcus, dietzia, bacillus, oceanobacillus, and citricoccus. the halophilic oil-utilizing bacteria belonged to the genera: marinobacter, georgenia, microbacterium ... | 2007 | 17710391 |
| isoptericola jiangsuensis sp. nov., a chitin-degrading bacterium. | a gram-positive-staining, non-motile, rod- or coccoid-shaped bacterium, strain clg(t), was isolated from beach sand from lianyungang, jiangsu province, pr china. the organism grew optimally at 30 degrees c and ph 7.0. strain clg(t) contained l-lys-d-asp as the peptidoglycan type and galactose, rhamnose and xylose as the whole-cell sugars. it contained anteiso-c(15 : 0) and iso-c(15 : 0) as the major fatty acids. the major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phospholip ... | 2010 | 19661504 |
| identities of epilithic hydrocarbon-utilizing diazotrophic bacteria from the arabian gulf coasts, and their potential for oil bioremediation without nitrogen supplementation. | gravel particles from four sites along the arabian gulf coast in autumn, winter, and spring were naturally colonized with microbial consortia containing between 7 and 400 × 10(2) cm(-2) of cultivable oil-utilizing bacteria. the 16s rrna gene sequences of 70 representatives of oil-utilizing bacteria revealed that they were predominantly affiliated with the gammaproteobacteria and the actinobacteria. the gammaproteobacteria comprised among others, the genera pseudomonas, pseudoalteromonas, shewane ... | 2010 | 20567813 |
| isoptericola chiayiensis sp. nov., isolated from mangrove soil of taiwan. | an actinomycete strain 06182m-1t which was isolated from a mangrove soil sample collected from chiayi county in taiwan. phylogenetic analysis of this strain based on 16s rdna sequences revealed 96.89% to 98.8% similarity to species of genus isoptericola. chemotaxonomic data determined for the isolate also supported the placement of strain 06182m-1t within the genus isoptericola. the low level of dna-dna relatedness to the species of genus isoptericloa in combination with differentiating phenotyp ... | 2010 | 20729312 |
| identification of chitinases is-chia and is-chib from isoptericola jiangsuensis clg and their characterization. | a 274-bp conserved fragment of chia (chia-cf) was amplified from the genomic dna of isoptericola jiangsuensis clg (dsm 21863, cctcc ab208287) using the specific pcr primers. based on chia-cf sequences, a 5233-bp dna fragment was obtained by self-formed adaptor pcr. dna sequencing analysis revealed there were two contiguous open reading frames coding for the precursors of is-chia [871 amino acids (aa)] and is-chib (561 aa) in the 5233-bp dna fragment. the is-chia and is-chib exhibited 58% and 62% ... | 2010 | 20922373 |
| isoptericola nanjingensis sp. nov., a mineral-weathering bacterium. | a gram-positive-staining, non-motile, rod- or coccoid-shaped actinobacterium, designated strain h17(t), was isolated from a soil sample from nanjing, jiangsu province, prchina. the organism grew optimally at 30 ┬░c, ph 7.0 and with 3% nacl. strain h17(t) contained l-lys-d-asp as the peptidoglycan type and galactose, xylose and mannose as the whole-cell sugars. the major fatty acids were anteiso-c(15:0) and iso-c(15:0). the total polar lipids were diphosphatidylglycerol, phosphatidylglycerol, pho ... | 2011 | 21669920 |
| amylolytic microorganism from s+úo paulo zoo composting: isolation, identification, and amylase production. | composting is a way of transforming the organic waste into fertilizer, minimizing the use of inorganic compounds that may contaminate the environment. this transformation is the result of the microorganism action, converting complex carbon sources into energy. enzymes that are exported by the microorganisms to the surrounding environment mediate this process. the aiming of the present work is to prospect the compost produced by the organic composting unit (ocu) of the funda+º+úo parque zool+¦gic ... | 2011 | 21845217 |