| dyella koreensis sp. nov., a beta-glucosidase-producing bacterium. | a bacterial strain (designated bb4(t)), which has beta-glucosidase activity, was isolated from soil around the roots of bamboo plants. cells were gram-negative, aerobic, non-motile and straight-rod-shaped. phylogenetic analysis of 16s rrna gene sequences revealed a clear affiliation with members of the family 'xanthomonadaceae'. the 16s rrna gene sequence of strain bb4(t) showed the following sequence similarities: 97.7% to dyella japonica xd53(t), 97.1% to frateuria aurantia lmg 1558(t), 96.2% ... | 2005 | 16014492 |
| dyella japonica bacteremia in hemodialysis patient. | | 2007 | 17953113 |
| genome sequence of dyella japonica strain a8, a quorum-quenching bacterium that degrades n-acylhomoserine lactones, isolated from malaysian tropical soil. | dyella japonica strain a8 is a malaysian tropical soil bacterial strain which shows n-acylhomoserine lactone-degrading activity. here, we present its draft genome sequence. a putative quorum-quenching gene was identified based on the genome sequence analysis of strain a8. to the best of our knowledge, this is the first genome announcement of a member from the genus of dyella, and this is also the first work that reports the quorum-quenching activity of dyella japonica. | 2012 | 23105069 |
| dyella jiangningensis sp. nov., a γ-proteobacterium isolated from the surface of potassium-bearing rock. | a gram-stain-negative, aerobic, motile with one polar flagellum γ-proteobacterium, designated strain sbz3-12(t), was isolated from surfaces of weathered potassic trachyte. phylogenetic analysis of this strain based on 16s rrna gene sequences showed that it was most closely related to dyella japonica xd53(t) (97.9% 16s rrna gene sequence similarity), dyella terrae js14-6(t) (97.7%), dyella soli js12-10(t) (97.5%) and dyella koreensis bb4(t) (97.0%). the dna g+c content of strain sbz3-12(t) was 64 ... | 2013 | 23435246 |
| dyella kyungheensis sp. nov., isolated from soil of a cornus fruit field. | a gram-reaction-negative, aerobic, motile by one polar flagellum, yellow-pigmented, rod-shaped bacterium, designated strain thg-b117(t), was isolated from soil of a cornus fruit field of hoengseong province in south korea and its taxonomic position was investigated by a polyphasic study. strain thg-b117(t) grew well at 25-30 °c and at ph 6.0-8.0 in the absence of nacl on nutrient agar. on the basis of 16s rrna gene sequence similarity, strain thg-b117(t) was shown to belong to the family xanthom ... | 2013 | 23667147 |
| complete genome sequence of dyella japonica strain a8 isolated from malaysian tropical soil. | we previously identified and presented the draft genome of a xanthomonadaceae bacterial strain dyella japonica a8 which shows quorum-quenching activity. here, we report the complete, closed genome sequence of this bacterium. this complete genome may help to further investigate the comparative quorum-quenching activity among d. japonica strains. | 2014 | 25395638 |
| rhodanobacter panaciterrae sp. nov., with ginsenoside converting activity isolated from soil of a ginseng field. | a novel gammaproteobacterium, designated lnr5-47t, was isolated from soil of a ginseng field in liaoning province, china and was characterized using a polyphasic approach. the strain was gram-staining-negative, aerobic, non-motile, non-spore-forming, and rod-shaped. phylogenetic analysis based on 16s rrna gene sequences showed that this strain belonged to the genus rhodanobacter; it is most closely related to the rhodanobacter ginsengisoli gr17-7t, rhodanobacter terrae gp18-1t, dyella ginsengiso ... | 2011 | 21296929 |
| dyella soli sp. nov. and dyella terrae sp. nov., isolated from soil. | two novel strains isolated from soils, js12-10(t) and js14-6(t), were characterized using a polyphasic approach to determine their taxonomic positions. these isolates were found to be aerobic, gram-negative, motile with one polar flagellum, non-spore-forming and rod-shaped. phenotypic and fatty acid data supported the affiliation of js12-10(t) and js14-6(t) to the genus dyella. however, chemotaxonomic data and dna-dna relatedness values allowed differentiation of these strains from other dyella ... | 2009 | 19542132 |
| dyella marensis sp. nov., isolated from cliff soil. | a novel, gram-negative bacterium, designated cs5-b2(t), was isolated from soil that had been collected from a cliff on mara island, republic of korea. phylogenetic analyses based on 16s rrna gene sequences showed that the strain fell within the radiation of the genus dyella. the closest relatives were the type strains of dyella koreensis, dyella ginsengisoli and dyella japonica and 16s rrna gene sequence similarities between strain cs5-b2(t) and these strains were 99.0, 97.9 and 97.8 %, respecti ... | 2009 | 19502323 |
| migratory response of soil bacteria to lyophyllum sp. strain karsten in soil microcosms. | in this study, the selection of bacteria on the basis of their migration via fungal hyphae in soil was investigated in microcosm experiments containing lyophyllum sp. strain karsten (dsm2979). one week following inoculation with a bacterial community obtained from soil, selection of a few specific bacterial types was noticed at 30 mm in the growth direction of lyophyllum sp. strain karsten in sterile soil. cultivation-based analyses showed that the migration-proficient types encompassed 10 bacte ... | 2009 | 19286795 |
| dyella ginsengisoli sp. nov., isolated from soil of a ginseng field in south korea. | a gram-negative, aerobic, yellow-pigmented, non-spore-forming, motile, rod-shaped bacterium, designated strain gsoil 3046(t), was isolated from soil from a ginseng field in pocheon province, south korea, and was characterized taxonomically by using a polyphasic approach. a comparative analysis of 16s rrna gene sequences revealed that strain gsoil 3046(t) belongs to the family xanthomonadaceae in the gammaproteobacteria. the greatest sequence similarity was found with respect to dyella koreensis ... | 2009 | 19244422 |
| rhodanobacter spathiphylli sp. nov., a gammaproteobacterium isolated from the roots of spathiphyllum plants grown in a compost-amended potting mix. | three gram-negative, yellow-pigmented strains were isolated from the rhizospheres of spathiphyllum plants grown in a compost-amended potting mix. the strains showed biological control activity towards the root-rot plant pathogen cylindrocladium spathiphylli, and were characterized to determine their taxonomic position. cells of the strains were non-motile rods, and the strains were oxidase- and catalase-positive and unable to ferment most sugars tested. the three strains showed differences in gr ... | 2006 | 16902003 |
| dyella japonica gen. nov., sp. nov., a gamma-proteobacterium isolated from soil. | three strains isolated from the soil of a garden in tokyo, japan, were characterized physiologically, biochemically and in terms of fatty acid profile, dna-dna relatedness and 16s rrna gene sequence. the isolates were gram-negative, aerobic, rod-shaped cells with polar flagellation. according to dna-dna similarity, the strains belonged to the same species. the bacteria grew at temperatures from 10 to 37 degrees c, with an optimum around 25-30 degrees c. growth was observed at ph values from 5.6 ... | 2005 | 15774657 |