| recharacterization of pseudomonas fulva iizuka and komagata 1963, and proposals of pseudomonas parafulva sp. nov. and pseudomonas cremoricolorata sp. nov. | seven pseudomonas fulva strains obtained from culture collections were taxonomically studied. the seven strains were separated into three clusters (clusters i to iii) on the basis of 16s rrna gene sequences, and located phylogenetically in the genus pseudomonas sensu stricto. further, the strains were classified into 4 groups (groups i to iv) on the basis of dna-dna similarity. as a result, cluster i was split into groups i and ii. group i included the type strain of p. fulva and two strains, an ... | 2001 | 12483612 |
| pseudomonas pachastrellae sp. nov., isolated from a marine sponge. | two gram-negative, non-fermentative, non-denitrifying, non-pigmented, rod-shaped bacteria that were motile by means of polar flagella, designated strains kmm 330(t) and kmm 331, were isolated from a deep-sea sponge specimen and subjected to a polyphasic taxonomic study. the new isolates exhibited 16s rrna gene sequence similarity of 99.9 %, and their mean level of dna-dna relatedness was 82 %. phylogenetic analysis based on their 16s rrna gene sequences placed the strains within the genus pseudo ... | 2005 | 15774686 |
| high quality draft genome sequences of pseudomonas fulva dsm 17717(t), pseudomonas parafulva dsm 17004(t) and pseudomonas cremoricolorata dsm 17059(t) type strains. | pseudomonas has the highest number of species out of any genus of gram-negative bacteria and is phylogenetically divided into several groups. the pseudomonas putida phylogenetic branch includes at least 13 species of environmental and industrial interest, plant-associated bacteria, insect pathogens, and even some members that have been found in clinical specimens. in the context of the genomic encyclopedia of bacteria and archaea project, we present the permanent, high-quality draft genomes of t ... | 2016 | 27594974 |
| genome sequence of pseudomonas parafulva crs01-1, an antagonistic bacterium isolated from rice field. | pseudomonas parafulva (formerly known as pseudomonas fulva) is an antagonistic bacterium against several rice bacterial and fungal diseases. the total genome size of p. parafulva crs01-1 is 5,087,619 bp with 4389 coding sequences (cdss), 77 trnas, and 7 rrnas. the annotated full genome sequence of the p. parafulva crs01-1 strain might shed light on its role as an antagonistic bacterium. | 2015 | 25835951 |
| complete genome sequence of pseudomonas parafulva prs09-11288, a biocontrol strain produces the antibiotic phenazine-1-carboxylic acid. | rhizoctonia solani is a plant pathogenic fungus, which can infect a wide range of economic crops including rice. in this case, biological control of this pathogen is one of the fundmental way to effectively control this pathogen. the pseudomonas parafulva strain prs09-11288 was isolated from rice rhizosphere and shows biocontrol ability against r. solani. here, we analyzed the p. parafulva genome, which is ~ 4.7 mb, with 4310 coding sequences, 76 trnas, and 7 rrnas. genome analysis identified a ... | 2018 | 29356878 |
| isolation, identification, and degradation performance of a pfoa-degrading strain. | the perfluorooctanoic acid (pfoa)-degrading strain yab1 was isolated from the soil near a perfluorinated compound production plant through acclimation and enrichment culture, using pfoa as the sole carbon source. this strain was preliminarily identified as pseudomonas parafulva based on colony morphology, physiological and biochemical features, and 16s rrna gene sequencing. using shaking flask fermentation, the maximum tolerable concentration of yab1 on pfoa was found to be 1000 mg/l. the optima ... | 2016 | 27173322 |
| draft genome sequence of perfluorooctane acid-degrading bacterium pseudomonas parafulva yab-1. | pseudomonas parafulva yab-1, isolated from perfluorinated compound-contaminated soil, has the ability to degrade perfluorooctane acid (pfoa) compound. here, we report the draft genome sequence and annotation of the pfoa-degrading bacterium p. parafulva yab-1. the data provide the basis to investigate the molecular mechanism of pfoa metabolism. | 2015 | 26337877 |