| fulvimonas yonginensis sp. nov., isolated from greenhouse soil, and emended description of the genus fulvimonas. | a novel strain, designated 5ghs31-2(t), was isolated from a greenhouse soil sample collected from yongin city, south korea. cells of strain 5ghs31-2(t) were gram-stain-negative, rod-shaped, polar flagellated and yellow-pigmented. the isolate was aerobic, catalase-negative and oxidase-positive and grew optimally at 28-30 °c and ph 7.0. strain 5ghs31-2(t) revealed the highest 16s rrna gene sequence similarities with fulvimonas soli lmg 19981(t) (97.6%), dyella thiooxydans atsb10(t) (97.5%) and fra ... | 2014 | 24860108 |
| oleiagrimonas soli gen. nov., sp. nov., a genome-sequenced gammaproteobacterium isolated from an oilfield. | a yellow-pigmented strain, designated strain 3.5x(t), was isolated from oil-contaminated saline soil in gudao, shandong province, china, and was characterized taxonomically. the results showed that the isolate was a gram-stain-negative, aerobic, motile, rod-shaped cell with a polar flagellum. phylogenetic analysis of 16s rrna gene sequences revealed the strain belonged to the family xanthomonadaceae in the class gammaproteobacteria and represented an independent taxon separated from other genera ... | 2015 | 25724748 |
| dyella yeojuensis sp. nov., isolated from greenhouse soil in korea. | a novel strain, r2a16-10(t), was isolated from greenhouse soil in yeoju, korea. the taxonomy of strain r2a16-10(t) was studied by using polyphasic methods. on the basis of 16s rrna gene sequence analyses, strain r2a16-10(t) was found to be phylogenetically related to type strains of dyella species (96.7-96.9 %), frateuria aurantia dsm 6220(t) (96.5 %), fulvimonas soli lmg 19981(t) (96.3 %) and rhodanobacter species (94.9-95.7 %). strain r2a16-10(t), which produced yellow-coloured colonies, was g ... | 2006 | 16957102 |
| aquimonas voraii gen. nov., sp. nov., a novel gammaproteobacterium isolated from a warm spring of assam, india. | a bacterial strain designated gptsa 20(t), which was isolated from a warm spring in assam, india, was characterized by using a polyphasic approach. the cells were gram-negative, aerobic rods, which could not utilize or produce acid from most of the carbohydrates tested. the predominant fatty acids were c(15:0) iso (25.04%), c(17:1) iso omega9c (19.28%), c(16:0) iso (17.73%) and c(11:0) iso 3-oh (9.34%). the g+c content was 75 mol%. from 16s rrna gene sequence analysis (1433 nucleotides, continuo ... | 2005 | 16014470 |
| fulvimonas soli gen. nov., sp. nov., a gamma-proteobacterium isolated from soil after enrichment on acetylated starch plastic. | six deep-yellow-pigmented strains were isolated from soil after enrichment on plasticized acetylated starch granules as a source of carbon. they showed very similar and unique fatty acid profiles, consisting almost exclusively of branched fatty acids. the strains consisted of small, motile rods, were oxidase- and catalase-positive, did not ferment sugars and were able to depolymerize starch and suspended acetylated starch in overlayer plates. the 16s rdna sequence of a representative strain, str ... | 2002 | 12148641 |
| dyella japonica gen. nov., sp. nov., a gamma-proteobacterium isolated from soil. | three strains isolated from the soil of a garden in tokyo, japan, were characterized physiologically, biochemically and in terms of fatty acid profile, dna-dna relatedness and 16s rrna gene sequence. the isolates were gram-negative, aerobic, rod-shaped cells with polar flagellation. according to dna-dna similarity, the strains belonged to the same species. the bacteria grew at temperatures from 10 to 37 degrees c, with an optimum around 25-30 degrees c. growth was observed at ph values from 5.6 ... | 2005 | 15774657 |
| dyella ginsengisoli sp. nov., isolated from soil of a ginseng field in south korea. | a gram-negative, aerobic, yellow-pigmented, non-spore-forming, motile, rod-shaped bacterium, designated strain gsoil 3046(t), was isolated from soil from a ginseng field in pocheon province, south korea, and was characterized taxonomically by using a polyphasic approach. a comparative analysis of 16s rrna gene sequences revealed that strain gsoil 3046(t) belongs to the family xanthomonadaceae in the gammaproteobacteria. the greatest sequence similarity was found with respect to dyella koreensis ... | 2009 | 19244422 |
| luteibacter rhizovicinus gen. nov., sp. nov., a yellow-pigmented gammaproteobacterium isolated from the rhizosphere of barley (hordeum vulgare l.). | three strains of gram-negative, aerobic, yellow-pigmented, chemo-organotrophic bacteria, motile by a polar flagellum, were isolated from the rhizosphere of spring barley (hordeum vulgare l.) at a research field near copenhagen, denmark. the three strains, lj79, lj96t and lj99, formed visible colonies on one-tenth-strength tryptic soy broth supplemented with agar (1/10 tsba) after incubation for 6 days at 15 degrees c. the strains hydrolysed starch, casein (skimmed milk), gelatin and various pent ... | 2005 | 16280484 |
| dyella koreensis sp. nov., a beta-glucosidase-producing bacterium. | a bacterial strain (designated bb4(t)), which has beta-glucosidase activity, was isolated from soil around the roots of bamboo plants. cells were gram-negative, aerobic, non-motile and straight-rod-shaped. phylogenetic analysis of 16s rrna gene sequences revealed a clear affiliation with members of the family 'xanthomonadaceae'. the 16s rrna gene sequence of strain bb4(t) showed the following sequence similarities: 97.7% to dyella japonica xd53(t), 97.1% to frateuria aurantia lmg 1558(t), 96.2% ... | 2005 | 16014492 |
| dyella thiooxydans sp. nov., a facultatively chemolithotrophic, thiosulfate-oxidizing bacterium isolated from rhizosphere soil of sunflower (helianthus annuus l.). | a gram-negative, aerobic, motile, rod-shaped, thiosulfate-oxidizing bacterium, designated atsb10(t), was isolated from rhizosphere soil of sunflower (helianthus annuus l.). phylogenetic analysis based on 16s rrna gene sequences revealed that strain atsb10(t) was closely related to members of the genera dyella (96.4-98.1 % 16s rrna gene sequence similarity) and luteibacter (96.4-97.0 %) and fulvimonas soli lmg 19981(t) (96.7 %) and frateuria aurantia ifo 3245(t) (97.8 %). the predominant fatty ac ... | 2011 | 20305058 |
| pseudofulvimonas gallinarii gen. nov., sp. nov., a new member of the family xanthomonadaceae. | a gram-stain-negative, rod-shaped, oxidase-positive, non-spore-forming bacterium (sa15(t)) was isolated from the air in a duck barn. on the basis of 16s rrna gene sequence similarity studies, the organism was grouped into the class gammaproteobacteria in the neighbourhood of the genus fulvimonas. the quinone system consisted exclusively of ubiquinone q-8. the polar lipid profile was mainly composed of the major lipids diphosphatidylglycerol, phosphatidylmonomethylethanolamine and phosphatidylcho ... | 2010 | 19671709 |
| rhodanobacter spathiphylli sp. nov., a gammaproteobacterium isolated from the roots of spathiphyllum plants grown in a compost-amended potting mix. | three gram-negative, yellow-pigmented strains were isolated from the rhizospheres of spathiphyllum plants grown in a compost-amended potting mix. the strains showed biological control activity towards the root-rot plant pathogen cylindrocladium spathiphylli, and were characterized to determine their taxonomic position. cells of the strains were non-motile rods, and the strains were oxidase- and catalase-positive and unable to ferment most sugars tested. the three strains showed differences in gr ... | 2006 | 16902003 |