| muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from german north sea intertidal sediment. | a gram-negative, facultatively anaerobic bacterium with appendages was isolated from continuous cultures with a seawater-sediment suspension containing hexadecane as the sole carbon source. although this organism was isolated from a hexadecane-degrading bacterial community, it was not able to degrade hexadecane. however, this bacterium was able to use different sugars and amino acids for growth, indicating that it probably profits from the lysis or from products like surfactants of other cells i ... | 2001 | 11760940 |
| muricauda lutaonensis sp. nov., a moderate thermophile isolated from a coastal hot spring. | a yellow-pigmented, gram-staining-negative, aerobic, non-motile, moderately thermophilic, rod-shaped bacterium, designated strain cc-hsb-11(t), was isolated from a coastal hot spring of green island (lutao), located off taituang, taiwan. 16s rrna gene sequence analysis demonstrated that it shared <94.4 % sequence similarity with muricauda species. menaquinone with six isoprene units (mk-6) was the major respiratory quinone and iso-c(15 : 0), iso-c(15 : 1) g, iso-c(15 : 0) 3-oh, iso-c(16 : 0) 3-o ... | 2009 | 19625419 |
| muricauda flavescens sp. nov. and muricauda aquimarina sp. nov., isolated from a salt lake near hwajinpo beach of the east sea in korea, and emended description of the genus muricauda. | four gram-negative, non-spore-forming, slightly halophilic rods (strains sw-62(t), sw-74, sw-63(t) and sw-72) with appendages were isolated from a salt lake near hwajinpo beach on the east sea in korea, and subjected to a polyphasic taxonomic analysis. phylogenetic analyses based on 16s rrna gene sequences showed that strains sw-62(t), sw-74, sw-63(t) and sw-72 formed a coherent cluster with muricauda ruestringensis. strains sw-62(t) and sw-74 had the same 16s rrna gene sequence, as did strains ... | 2005 | 15879227 |
| spongiibacterium flavum gen nov., sp. nov., a novel member of the family flavobacteriaceae isolated from marine sponge halichondria oshoro, and emended description of the genera croceitalea and flagellimonas. | the novel marine, gram-negative, yellow-pigmented, rod-shaped, strictly aerobic, non-flagellated, non-gliding and oxidase- and catalase-positive bacterial strain a11t was isolated from a marine sponge halichondria oshoro collected on coastline of jeju island, south korea. phylogenetic analysis based on the nearly complete 16s rrna gene sequence revealed that strain a11t was a members of the genera flavobacteriaceae. its closest relatives were members of the genera muricauda, flagellimonas, and c ... | 2011 | 21724954 |
| muricauda beolgyonensis sp. nov., isolated from a tidal flat sediment. | a gram- staining-negative, non-motile, rod-shaped bacterial strain, bb-my12t, was isolated from a tidal flat sediment sample of korea, and its taxonomic position was investigated by using a polyphasic approach. strain bb-my12t grew optimally at 37-¦c, at ph 7.0-7.5 and in the presence of 2-3 % (w/v) nacl. phylogenetic analyses based on 16s rrna gene sequences revealed that strain bb-my12t fell within the cluster comprising muricauda species. strain bb-my12t exhibited 16s rrna gene sequence simil ... | 2011 | 21724956 |
| polyphasic approach for assessing changes in an autochthonous marine bacterial community in the presence of prestige fuel oil and its biodegradation potential. | a laboratory experiment was conducted to identify key hydrocarbon degraders from a marine oil spill sample (prestige fuel oil), to ascertain their role in the degradation of different hydrocarbons, and to assess their biodegradation potential for this complex heavy oil. after a 17-month enrichment in weathered fuel, the bacterial community, initially consisting mainly of methylophaga species, underwent a major selective pressure in favor of obligate hydrocarbonoclastic microorganisms, such as al ... | 2011 | 21562979 |
| supercritical carbon dioxide micronization of zeaxanthin from moderately thermophilic bacteria muricauda lutaonensis cc-hsb-11t. | moderately thermophilic bacterial strain cc-hsb-11(t) (muricauda lutaonensis), which was described recently from a coastal hot spring of green island, taiwan, has been identified to produce zeaxanthin as a predominant xanthophyll by liquid chromatography-tandem mass spectrometry (lc-ms/ms). cell culture in bioreactor produced 3.12 -¦ 0.18 mg zeaxanthin l(-1) of culture. micronization of zeaxanthin was achieved through supercritical carbon dioxide antisolvent precipitation method. yield of zeaxan ... | 2011 | 21384920 |
| muricauda olearia sp. nov., isolated from crude-oil-contaminated seawater, and emended description of the genus muricauda. | a gram-staining-negative, rod-shaped and non-motile bacterium, designated cl-ss4t, was isolated from crude-oil-contaminated seawater from the west coast of korea and was investigated by means of a polyphasic taxonomic approach. strain cl-ss4t grew optimally at 25-30 degrees c, at ph 6.8-7.7 and in the presence of 2-3% sea salts. the major fatty acids were iso-c17:0 3-oh, iso-c15:0 and iso-c15:1 g. the major isoprenoid quinone was mk-6. the dna g+c content was 50.7 mol%. analysis of the 16s rrna ... | 2009 | 19567580 |
| pseudozobellia thermophila gen. nov., sp. nov., a bacterium of the family flavobacteriaceae, isolated from the green alga ulva fenestrata. | two novel aerobic, dark-orange-pigmented, gram-negative bacterial strains, designated kmm 3531(t) and kmm 3953, were isolated from the green alga ulva fenestrata. analysis of the 16s rrna gene sequences showed that the strains represented a novel lineage within the family flavobacteriaceae. the most closely related genera with validly published names were costertonia, flagellimonas, kriegella, maribacter, muricauda and zobellia, with 16s rrna gene sequence similarities of 93.3-91.8 %. cells of s ... | 2009 | 19329611 |
| description of croceitalea gen. nov. in the family flavobacteriaceae with two species, croceitalea eckloniae sp. nov. and croceitalea dokdonensis sp. nov., isolated from the rhizosphere of the marine alga ecklonia kurome. | two novel bacterial strains, designated dokdo 025(t) and dokdo 023(t), were isolated on dokdo island, korea, from the rhizosphere of the brown alga ecklonia kurome. the strains were subjected to a polyphasic taxonomy study and were found to be gram-negative, aerobic, rod-shaped, non-motile and orange-coloured. the isolates shared 96.3 % 16s rrna gene sequence similarity. they showed 93.8-95.6 % 16s rrna gene sequence similarity with respect to members of the genus muricauda in the family flavoba ... | 2008 | 18984684 |
| muricauda lutimaris sp. nov., isolated from a tidal flat of the yellow sea. | a gram-negative, non-motile, rod-shaped bacterial strain, smk-108(t), was isolated from a tidal flat of the yellow sea in korea and was subjected to a polyphasic taxonomic investigation. strain smk-108(t) grew optimally at ph 7.0-8.0 and at 30 degrees c. it contained mk-6 as the predominant menaquinone. the major fatty acids were iso-c(17 : 0) 3-oh, iso-c(15 : 1) and iso-c(15 : 0). the dna g+c content was 41.1 mol%. comparative 16s rrna gene sequence analysis showed that strain smk-108(t) was re ... | 2008 | 18599702 |
| flagellimonas eckloniae gen. nov., sp. nov., a mesophilic marine bacterium of the family flavobacteriaceae, isolated from the rhizosphere of ecklonia kurome. | a marine bacterium, dokdo 007(t), was isolated from the rhizosphere of the marine alga ecklonia kurome collected from dokdo island, korea, in october 2004. the strain produced orange-coloured colonies on marine agar 2216. 16s rrna gene sequence analysis indicated that the novel isolate belonged to the family flavobacteriaceae and showed relatively high sequence similarities with members of the genus muricauda (92.0-94.0 %). phylogenetic analysis based on nearly complete 16s rrna gene sequences r ... | 2007 | 17473257 |
| costertonia aggregata gen. nov., sp. nov., a mesophilic marine bacterium of the family flavobacteriaceae, isolated from a mature biofilm. | a marine bacterium, strain kopri 13342(t), was isolated from a mature marine biofilm, including various marine algae, covering a rock-bed of the east sea, korea (also known as the sea of japan). colonies of the isolate were orange-coloured on marine agar 2216. the isolate showed relatively high 16s rrna gene sequence similarities to members of the genera maribacter (91.2-92.4 % similarity), zobellia (90.7-91.5 %) and muricauda (90.7-91.4 %). phylogenetic analysis based on the nearly complete 16s ... | 2006 | 16738113 |
| phylogenetic classification of heterotrophic bacteria associated with filamentous marine cyanobacteria in culture. | fifty-one heterotrophic bacterial strains were isolated from the marine cyanobacterial cultures of heterocystous nodularia harveyana strain bo53 and non-heterocystous oscillatoria brevis strain bo10. fluorescence in situ hybridisation and fingerprinting methods were used for a preliminary taxonomical classification of 44 of the 51 isolates. the strains obtained from bo53 were mostly alphaproteobacteria (10/24), followed by bacteroidetes (7/24), and gammaproteobacteria (3/24). the affiliation of ... | 2009 | 19423262 |