| pseudomonas glathei sp. nov., a new nitrogen-scavening rod isolated from acid lateritic relicts in germany. | | 1975 | 1176650 |
| a physical genome map of the burkholderia cepacia type strain. | burkholderia cepacia (basonym pseudomonas cepacia), the type species of the new genus burkholderia, is of interest, not only because of its broad catabolic capacity and its ability to antagonize soil-borne plant pathogens, but also because of its causative role in infections in man, which are particularly evident in patients with cystic fibrosis. a physical map of the 8.1 mb genome of the b. cepacia type-strain atcc 25416 was constructed by applying two-dimensional pulsed-field gel electrophores ... | 1995 | 7476209 |
| occurrence of polyhydroxyalkanoic acid granule-associated proteins related to the alcaligenes eutrophus h16 ga24 protein in other bacteria. | fifty different polyhydroxyalkanoic acid (pha)-accumulating bacterial strains were investigated for the occurrence of phasin proteins bound to pha granules and related to the ga24 protein of alcaligenes eutrophus h16, by isolating pha granules and western blot analysis of granule-associated proteins employing antibodies raised against the ga24 protein. it could be demonstrated that th pha granules of many poly(3-hydroxybutyrate)-accumulating bacteria exhibited a similar protein pattern, and a pr ... | 1996 | 8598273 |
| occurrence of multiple genomovars of burkholderia cepacia in cystic fibrosis patients and proposal of burkholderia multivorans sp. nov. | we performed an integrated genotypic and phenotypic analysis of 128 strains of the genera burkholderia, ralstonia, and pseudomonas in order to study the taxonomic structure of burkholderia cepacia and its relationships with other burkholderia species. our data show that presumed b. cepacia strains isolated from cystic fibrosis patients belong to at least five distinct genomic species, one of which was identified as burkholderia vietnamiensis. this group of five phenotypically similar species is ... | 1997 | 9336927 |
| burkholderia graminis sp. nov., a rhizospheric burkholderia species, and reassessment of [pseudomonas] phenazinium, [pseudomonas] pyrrocinia and [pseudomonas] glathei as burkholderia. | in a survey of soil and wheat or maize rhizoplane bacteria isolated using a medium containing azelaic acid and tryptamine as sole carbon and nitrogen sources, respectively, a large proportion of burkholderia-like bacteria were found. among them, a homogeneous group of strains was identifiable based on phenotypic properties, fatty acid composition, dna-dna hybridizations and 16s rdna sequences. according to molecular data, this group belongs to the genus burkholderia but its weak similarity to pr ... | 1998 | 9731297 |
| burkholderia caribensis sp. nov., an exopolysaccharide-producing bacterium isolated from vertisol microaggregates in martinique. | twenty-one exopolysaccharide-producing strains were isolated from the 5-20 microns fraction of a vertisol in the south-east of the island of martinique in the french west indies. although these strains were phenotypically identified as burkholderia cepacia or as burkholderia glathei using biolog microplates, they did not cluster genotypically by amplified rdna restriction analysis (ardra) with any described burkholderia species. a phylogenetic analysis revealed that the rrs (16s rdna) sequences ... | 1999 | 10319504 |
| multivariate analyses of burkholderia species in soil: effect of crop and land use history. | the assessment of burkholderia diversity in agricultural areas is important considering the potential use of this genus for agronomic and environmental applications. therefore, the aim of this work was to ascertain how plant species and land use management drive the diversity of the genus burkholderia. in a greenhouse experiment, different crops, i.e., maize, oat, barley, and grass, were planted in pots containing soils with different land use histories, i.e., maize monoculture, crop rotation, a ... | 2004 | 15240277 |
| optimization of biological phosphorus removal from contaminated sediments with phosphate-solubilizing microorganisms. | this study focused on the characteristics of phosphate-solubilizing microorganisms (psms) which can be applied for the removal of phosphorus from sediments to prevent eutrophication of lakes or ponds. a psm isolated from rhizospheric soil and temporarily identified as burkholderia glathei (mb 14) produced gluconate and acetate using glucose as a carbon source and its metabolic activity caused the ph of the liquid medium to decrease as low as 4.4. the molar ratio of solubilized po4(3-)-p to total ... | 2005 | 16233749 |
| bacterial diversity in soil enrichment cultures amended with 2 (2-methyl-4-chlorophenoxy) propionic acid (mecoprop). | summary the tfda gene encodes for an alpha-ketoglutarate-dependent dioxygenase enzyme which catalyses the first step of the degradation of phenoxyalkanoic acid herbicides such as 2 (2-methyl-4-chlorophenoxy) propionic acid (mecoprop). the bacterial diversity of soil enrichment cultures containing mecoprop was examined by denaturing gradient gel electrophoresis (dgge) and clone libraries of both 16s rrna genes and tfda genes. the 16s rrna gene sequences were diverse and clustered with either the ... | 2007 | 17803781 |
| burkholderia zhejiangensis sp. nov., a novel methyl parathion-degrading bacterium isolated from a wastewater-treating system. | the taxonomic status of a methyl parathion-degrading strain op-1t isolated from a wastewater-treating system was determined. the cells were gram-negative, non-spore-forming, non-motile, and rod-shaped. phylogenetic analysis based on 16s rrna gene sequence indicated that this strain belongs to the genus burkholderia, as it showed highest sequence similarities to burkholderia glathei atcc 29195t (97.4 %), burkholderia sordidicola kctc 12081t (96.5 %) and burkholderia bryophila lmg 23644t (96.3 %). ... | 2011 | 21828021 |
| asterisulphoxide and asterisulphone: two new antibacterial and antifungal metabolites from the tunisian asteriscus maritimus (l.) less. | two new sulphur-containing metabolites, asterisulphoxide 1 and asterisulphone 2, together with six known compounds, coniferaldehyde 4, 4-hydroxy-2-methoxybenzaldehyde 3, methylcaffeate 5, isobutyrate 10-isobutyryloxy-8,9-epoxythymyle 6, 8,9-dihydroxy-10-isobutyryloxythymol 7 and 8-hydroxy-9,14-diisobutyryloxythymol 8, were isolated from asteriscus maritimus roots. their structures were elucidated on the basis of spectroscopic evidence and comparison with authentic samples. compounds 1-8 were ass ... | 2014 | 24824823 |
| phylogenomic study of burkholderia glathei-like organisms, proposal of 13 novel burkholderia species and emended descriptions of burkholderia sordidicola, burkholderia zhejiangensis, and burkholderia grimmiae. | partial gyrb gene sequence analysis of 17 isolates from human and environmental sources revealed 13 clusters of strains and identified them as burkholderia glathei clade (bgc) bacteria. the taxonomic status of these clusters was examined by whole-genome sequence analysis, determination of the g+c content, whole-cell fatty acid analysis and biochemical characterization. the whole-genome sequence-based phylogeny was assessed using the genome blast distance phylogeny (gbdp) method and an extended m ... | 2016 | 27375597 |
| transfer of eleven species of the genus burkholderia to the genus paraburkholderia and proposal of caballeronia gen. nov. to accommodate twelve species of the genera burkholderia and paraburkholderia. | it has been proposed to split the genus burkholderia into two genera according to phylogenetic clustering: (1) a genus retaining this name and consisting mainly of animal and plant pathogens and (2) the genus paraburkholderia including so-called environmental bacteria. the latter genus name has been validly published recently. during the period between the effective and valid publications of the genus name paraburkholderia, 16 novel species of the genus burkholderiawere described, but only two o ... | 2016 | 27054671 |
| effects of the soil microbial community on mobile proportions and speciation of mercury (hg) in contaminated soil. | the precise characterization of the behavior of individual microorganisms in the presence of increased mercury contents in soil is necessary for better elucidation of the fate of mercury in the soil environment. in our investigation, resistant bacterial strains isolated from two mercury contaminated soils, represented by paenibacillus alginolyticus, burkholderia glathei, burkholderia sp., and pseudomonas sp., were used. two differently contaminated soils (0.5 and 7 mg kg(-1) total mercury) were ... | 2016 | 26761522 |
| burkholderia megalochromosomata sp. nov., isolated from grassland soil. | a gram-stain negative, rod-shaped, non-spore-forming, obligate aerobic bacterial strain, jc2949(t), was isolated from grassland soil in gwanak mountain, seoul, republic of korea. phylogenetic analysis, based on 16s rrna sequences, indicated that strain jc2949(t) belongs to the genus burkholderia, showing highest sequence similarities with burkholderia grimmiae r27(t) (98.8 %), burkholderia cordobensis lmg 27620(t) (98.6 %), burkholderia jiangsuensis mp-1t(t) (98.6 %), burkholderia zhejiangensis ... | 2015 | 25563916 |
| abundance and diversity of functional genes involved in the degradation of aromatic hydrocarbons in antarctic soils and sediments around syowa station. | hydrocarbon catabolic genes were investigated in soils and sediments in nine different locations around syowa station, antarctica, using conventional pcr, real-time pcr, cloning, and sequencing analysis. polycyclic aromatic hydrocarbon ring-hydroxylating dioxygenase (pah-rhd)-coding genes from both gram-positive and gram-negative bacteria were observed. clone libraries of gram-positive rhd genes were related to (i) nida3 of mycobacterium sp. py146, (ii) pdoa of terrabacter sp. hh4, (iii) nida of ... | 2015 | 25335763 |
| burkholderia jiangsuensis sp. nov., a methyl parathion degrading bacterium, isolated from methyl parathion contaminated soil. | a methyl parathion (mp) degrading bacterial strain, designated mp-1(t), was isolated from a waste land where pesticides were formerly manufactured in jiangsu province, china. polyphasic taxonomic studies showed that mp-1(t) is a gram-stain-negative, non-spore-forming, rod-shaped and motile bacterium. the bacterium could grow at salinities of 0-1 % (w/v) and temperatures of 15-40 °c. strain mp-1(t) could reduce nitrate to nitrite, utilize d-glucose and l-arabinose, but not produce indole, or hydr ... | 2014 | 24981326 |
| burkholderia humi sp. nov., burkholderia choica sp. nov., burkholderia telluris sp. nov., burkholderia terrestris sp. nov. and burkholderia udeis sp. nov.: burkholderia glathei-like bacteria from soil and rhizosphere soil. | analysis of partial gyrb gene sequences revealed six taxa in a group of 17 burkholderia glathei-like isolates which were further examined by (gtg)5-pcr fingerprinting, 16s rrna gene sequence analysis, dna-dna hybridizations, determination of the dna g+c content, whole-cell fatty acid analysis and an analysis of cell and colony morphology and more than 180 biochemical characteristics. the results demonstrated that one taxon consisting of three human clinical isolates represented burkholderia zhej ... | 2013 | 23959831 |
| burkholderia grimmiae sp. nov., isolated from a xerophilous moss (grimmia montana). | a gram-staining-negative, rod-shaped, non-spore-forming bacterium, designated strain r27(t), was isolated from the moss grimmia montana, collected from beijing songshan national nature reserve, china, and characterized by using a polyphasic taxonomic approach. the predominant fatty acids of strain r27(t) were c18:1ω7c (33.6%), c16:0 (16.3%), summed feature 3 (c16:1ω7c and/or c16:1ω6c; 15.8%) and c17:0 cyclo (8.7%) and its major polar lipids were phosphatidylethanolamine, phosphatidylglycerol, th ... | 2013 | 23087167 |