| flammeovirga kamogawensis sp. nov., isolated from coastal seawater in japan. | two strains of gliding, agarolytic bacteria, strains ys10(t) and yml5, were isolated from coastal seawater off kamogawa, japan. phylogenetic analysis based on 16s rrna gene sequences showed that the novel isolates represent a separate lineage within the genus flammeovirga. dna-dna hybridization values between these isolates and the type strains of species of the genus flammeovirga were significantly lower than those accepted as threshold values for the phylogenetic definition of a species. furth ... | 2007 | 17551052 |
| cloning and characterization of +¦-agarase agayt from flammeovirga yaeyamensis strain yt. | a bacterium with potent agar-degrading capability was isolated from the surface of a red algae, gracilaria tenuistipitata. based on phenotypic characteristics, 16s rdna gene sequence and a phylogenetic analysis, this bacterium was identified and named as flammeovirga yaeyamensis strain yt. pcr using homology-based degenerate primers was employed to clone any agarase gene belonging to gh16 family encoded in f. yaeyamensis strain yt. the resolved 1512 nucleotides revealed that the cloned gene, nam ... | 2011 | 21715227 |
| flammeovirga pacifica sp. nov., isolated from deep sea sediment of west pacific ocean. | a taxonomic study was carried out on strain wpaga1(t), which was isolated from marine sediment of west pacific ocean. phylogenetic analysis based on 16s rrna gene sequences indicated that the novel strain wpaga1(t) belonged to the genus flammeovirga, with the highest similarity to flammeovirga yaeyamensis nbrc 100898(t) (98.1 %), followed by flammeovirga arenaria nbrc 15982(t) (94.6 %), while remaining species of the genus had similarities below 94.2 %. dna - dna hybridization showed that strain ... | 2011 | 21669915 |
| sediminitomix flava gen. nov., sp. nov., of the phylum bacteroidetes, isolated from marine sediment. | a novel bacterium designated mok-1-85(t) was isolated from a marine sediment sample collected from okinawa island, japan. cells of strain mok-1-85(t) stained gram-negative, were catalase- and oxidase-positive and were non-motile. in a neighbour-joining tree based on 16s rrna gene sequences, the novel strain clustered with the genus flammeovirga, a member of the family 'flammeovirgaceae'. the novel isolate shared low 16s rrna gene sequence similarities (<or=86 %) with the members of the genus fla ... | 2007 | 17684238 |
| perexilibacter aurantiacus gen. nov., sp. nov., a novel member of the family 'flammeovirgaceae' isolated from sediment. | a strictly aerobic, gram-negative, gliding, dull-orange-pigmented, rod-shaped bacterium, designated strain shu-f-uv2-2(t), was isolated from sediment (carp island, republic of palau) and was the focus of a polyphasic taxonomic study. phylogenetic analyses based on the 16s rrna gene sequence revealed that the novel isolate was affiliated to the family 'flammeovirgaceae' of the phylum bacteroidetes and that it showed highest sequence similarity (85.5 %) to flammeovirga yaeyamensis nbrc 100898(t). ... | 2007 | 17473242 |
| emendation of the genus flammeovirga and flammeovirga aprica with the proposal of flammeovirga arenaria nom. rev., comb. nov. and flammeovirga yaeyamensis sp. nov. | the taxonomic positions of five bacterial strains isolated from the yaeyama islands of japan and 'microscilla arenaria' nbrc 15982 were determined using a polyphasic taxonomic approach. 16s rrna gene sequence analyses placed all of the strains close to the genus flammeovirga. dna-dna hybridization studies, biochemical and physiological characterizations and chemotaxonomic analyses suggested that 'm. arenaria' nbrc 15982 and the five novel isolates represented two separate species of the genus fl ... | 2006 | 16957105 |