| hymenolepis diminuta | 45 | species | invertebrates | helminths | 6216 |
| streptococcus mitis | 45 | species | bacteria | bacteria | 28037 |
| citrobacter rodentium | 45 | species | bacteria | bacteria | 67825 |
| achromobacter xylosoxidans | 45 | species | bacteria | bacteria | 85698 |
| morganella morganii | 46 | species | bacteria | bacteria | 582 |
| mycobacterium ulcerans | 46 | species | bacteria | bacteria | 1809 |
| aureobasidium pullulans | 46 | species | plants | fungi | 5580 |
| babesia bovis | 46 | species | invertebrates | protozoa | 5865 |
| ostertagia ostertagi | 46 | species | invertebrates | helminths | 6317 |
| penicillium expansum | 46 | species | plants | fungi | 27334 |
| leishmania chagasi | 46 | species | invertebrates | protozoa | 44271 |
| necator americanus | 46 | species | invertebrates | helminths | 51031 |
| eikenella corrodens | 47 | species | bacteria | bacteria | 539 |
| bacteroides thetaiotaomicron | 47 | species | bacteria | bacteria | 818 |
| trichophyton rubrum | 48 | species | plants | fungi | 5551 |
| scedosporium boydii | 48 | species | plants | fungi | 5597 |
| strongyloides stercoralis | 48 | species | invertebrates | helminths | 6248 |
| human herpesvirus 7 | 48 | species | viruses | viruses | 10372 |
| ross river virus | 48 | species | viruses | viruses | 11029 |
| influenza c virus | 48 | species | viruses | viruses | 11552 |
| ancylostoma caninum | 48 | species | invertebrates | helminths | 29170 |
| malassezia furfur | 48 | species | plants | fungi | 55194 |
| colletotrichum gloeosporioides | 48 | species | plants | fungi | 474922 |
| leptospira interrogans | 49 | species | bacteria | bacteria | 173 |
| actinomyces naeslundii | 49 | species | bacteria | bacteria | 1655 |
| mycobacterium kansasii | 49 | species | bacteria | bacteria | 1768 |
| thermomyces lanuginosus | 49 | species | plants | fungi | 5541 |
| leishmania tropica | 49 | species | invertebrates | protozoa | 5666 |
| comamonas testosteroni | 50 | species | bacteria | bacteria | 285 |
| streptococcus suis | 50 | species | bacteria | bacteria | 1307 |
| kluyveromyces marxianus | 50 | species | plants | fungi | 4911 |
| blastomyces dermatitidis | 50 | species | plants | fungi | 5039 |
| toxocara canis | 50 | species | invertebrates | helminths | 6265 |
| rhodococcus equi | 50 | species | bacteria | bacteria | 43767 |
| rickettsia prowazekii | 51 | species | bacteria | bacteria | 782 |
| mycobacterium marinum | 51 | species | bacteria | bacteria | 1781 |
| nocardia asteroides | 51 | species | bacteria | bacteria | 1824 |
| dirofilaria immitis | 51 | species | invertebrates | helminths | 6287 |
| human parainfluenza virus 3 | 51 | species | viruses | viruses | 11216 |
| trichuris trichiura | 51 | species | invertebrates | helminths | 36087 |
| nipah virus | 51 | species | viruses | viruses | 121791 |
| streptococcus equinus | 52 | species | bacteria | bacteria | 1335 |
| gardnerella vaginalis | 52 | species | bacteria | bacteria | 2702 |
| leishmania braziliensis | 52 | species | invertebrates | protozoa | 5660 |
| wuchereria bancrofti | 52 | species | invertebrates | helminths | 6293 |
| brucella melitensis | 52 | species | bacteria | bacteria | 29459 |
| chromobacterium violaceum | 53 | species | bacteria | bacteria | 536 |
| proteus vulgaris | 53 | species | bacteria | bacteria | 585 |
| shigella sonnei | 53 | species | bacteria | bacteria | 624 |
| rickettsia rickettsii | 53 | species | bacteria | bacteria | 783 |
| streptococcus salivarius | 53 | species | bacteria | bacteria | 1304 |
| bacillus pumilus | 53 | species | bacteria | bacteria | 1408 |
| clostridium butyricum | 53 | species | bacteria | bacteria | 1492 |
| rhodococcus erythropolis | 53 | species | bacteria | bacteria | 1833 |
| leishmania amazonensis | 53 | species | invertebrates | protozoa | 5659 |
| giardia intestinalis | 53 | species | invertebrates | protozoa | 5741 |
| babesia microti | 53 | species | invertebrates | protozoa | 5868 |
| schistosoma japonicum | 53 | species | invertebrates | helminths | 6182 |
| echinococcus multilocularis | 53 | species | invertebrates | helminths | 6211 |
| brugia pahangi | 53 | species | invertebrates | helminths | 6280 |
| teladorsagia circumcincta | 53 | species | invertebrates | helminths | 45464 |
| paracoccidioides brasiliensis | 53 | species | plants | fungi | 121759 |
| brevundimonas diminuta | 54 | species | bacteria | bacteria | 293 |
| bartonella quintana | 54 | species | bacteria | bacteria | 803 |
| mycoplasma hominis | 54 | species | bacteria | bacteria | 2098 |
| coccidioides immitis | 54 | species | plants | fungi | 5501 |
| venezuelan equine encephalitis virus | 54 | species | viruses | viruses | 11036 |
| enterocytozoon bieneusi | 54 | species | plants | fungi | 31281 |
| bordetella bronchiseptica | 55 | species | bacteria | bacteria | 518 |
| taenia solium | 55 | species | invertebrates | helminths | 6204 |
| tick-borne encephalitis virus | 55 | species | viruses | viruses | 11084 |
| vibrio alginolyticus | 56 | species | bacteria | bacteria | 663 |
| ehrlichia chaffeensis | 56 | species | bacteria | bacteria | 945 |
| alternaria alternata | 56 | species | plants | fungi | 5599 |
| schistosoma haematobium | 56 | species | invertebrates | helminths | 6185 |
| sphingomonas paucimobilis | 56 | species | bacteria | bacteria | 13689 |
| tannerella forsythia | 56 | species | bacteria | bacteria | 28112 |
| campylobacter fetus | 57 | species | bacteria | bacteria | 196 |
| [haemophilus] ducreyi | 57 | species | bacteria | bacteria | 730 |
| brevibacillus brevis | 57 | species | bacteria | bacteria | 1393 |
| rhodococcus rhodochrous | 57 | species | bacteria | bacteria | 1829 |
| leishmania infantum | 57 | species | invertebrates | protozoa | 5671 |
| trichostrongylus colubriformis | 57 | species | invertebrates | helminths | 6319 |
| influenza b virus | 57 | species | viruses | viruses | 11520 |
| wolinella succinogenes | 58 | species | bacteria | bacteria | 844 |
| mycobacterium chelonae | 58 | species | bacteria | bacteria | 1774 |
| encephalitozoon cuniculi | 58 | species | plants | fungi | 6035 |
| rotavirus a | 58 | species | viruses | viruses | 28875 |
| actinobacillus pleuropneumoniae | 59 | species | bacteria | bacteria | 715 |
| rhizomucor miehei | 59 | species | plants | fungi | 4839 |
| lysinibacillus sphaericus | 60 | species | bacteria | bacteria | 1421 |
| mycobacterium fortuitum | 60 | species | bacteria | bacteria | 1766 |
| fusobacterium nucleatum | 61 | species | bacteria | bacteria | 851 |
| streptococcus gordonii | 61 | species | bacteria | bacteria | 1302 |
| coprinopsis cinerea | 61 | species | plants | fungi | 5346 |
| echinococcus granulosus | 61 | species | invertebrates | helminths | 6210 |
| mumps virus | 61 | species | viruses | viruses | 11161 |
| hantaan virus | 61 | species | viruses | viruses | 11599 |
| burkholderia pseudomallei | 61 | species | bacteria | bacteria | 28450 |
| anaplasma phagocytophilum | 62 | species | bacteria | bacteria | 948 |