| shewanella | 96 | genus | bacteria | | 22 |
| myxococcus | 99 | genus | bacteria | | 32 |
| simonsiella | 11 | genus | bacteria | | 71 |
| blastobacter | 20 | genus | bacteria | | 109 |
| borrelia | 145 | genus | bacteria | | 138 |
| borreliella burgdorferi | 144 | species | bacteria | bacteria | 139 |
| borrelia hermsii | 44 | species | bacteria | bacteria | 140 |
| borrelia parkeri | 13 | species | bacteria | bacteria | 141 |
| borrelia turicatae | 21 | species | bacteria | bacteria | 142 |
| spirochaeta | 51 | genus | bacteria | | 146 |
| treponema | 99 | genus | bacteria | | 157 |
| treponema denticola | 58 | species | bacteria | bacteria | 158 |
| brachyspira hyodysenteriae | 46 | species | bacteria | bacteria | 159 |
| treponema pallidum | 87 | species | bacteria | bacteria | 160 |
| treponema phagedenis | 22 | species | bacteria | bacteria | 162 |
| leptospira | 62 | genus | bacteria | | 171 |
| leptospira interrogans | 49 | species | bacteria | bacteria | 173 |
| leptospira borgpetersenii | 18 | species | bacteria | bacteria | 174 |
| leptospira interrogans serovar hardjo | 27 | no rank | bacteria | bacteria | 176 |
| campylobacter | 207 | genus | bacteria | | 194 |
| campylobacter coli | 65 | species | bacteria | bacteria | 195 |
| campylobacter fetus | 57 | species | bacteria | bacteria | 196 |
| campylobacter jejuni | 130 | species | bacteria | bacteria | 197 |
| campylobacter hyointestinalis | 23 | species | bacteria | bacteria | 198 |
| campylobacter concisus | 20 | species | bacteria | bacteria | 199 |
| campylobacter curvus | 11 | species | bacteria | bacteria | 200 |
| campylobacter lari | 35 | species | bacteria | bacteria | 201 |
| campylobacter rectus | 41 | species | bacteria | bacteria | 203 |
| campylobacter sputorum | 22 | species | bacteria | bacteria | 206 |
| helicobacter | 241 | genus | bacteria | | 209 |
| helicobacter pylori | 246 | species | bacteria | bacteria | 210 |
| helicobacter cinaedi | 27 | species | bacteria | bacteria | 213 |
| helicobacter fennelliae | 16 | species | bacteria | bacteria | 215 |
| achromobacter | 65 | genus | bacteria | | 222 |
| alteromonas | 65 | genus | bacteria | | 226 |
| brucella | 89 | genus | bacteria | | 234 |
| brucella abortus | 76 | species | bacteria | bacteria | 235 |
| brucella ovis | 30 | species | bacteria | bacteria | 236 |
| flavobacterium | 97 | genus | bacteria | | 237 |
| elizabethkingia meningoseptica | 44 | species | bacteria | bacteria | 238 |
| chryseobacterium balustinum | 10 | species | bacteria | bacteria | 246 |
| myroides odoratus | 15 | species | bacteria | bacteria | 256 |
| francisella | 75 | genus | bacteria | | 262 |
| francisella tularensis | 74 | species | bacteria | bacteria | 263 |
| paracoccus | 106 | genus | bacteria | | 265 |
| comamonas | 58 | genus | bacteria | | 283 |
| comamonas testosteroni | 50 | species | bacteria | bacteria | 285 |
| pseudomonas | 295 | genus | bacteria | | 286 |
| pseudomonas aeruginosa | 243 | species | bacteria | bacteria | 287 |
| burkholderia cepacia | 107 | species | bacteria | bacteria | 292 |
| brevundimonas diminuta | 54 | species | bacteria | bacteria | 293 |
| pseudomonas fluorescens | 122 | species | bacteria | bacteria | 294 |
| pseudomonas putida | 133 | species | bacteria | bacteria | 303 |
| pseudomonas stutzeri | 76 | species | bacteria | bacteria | 316 |
| ralstonia pickettii | 44 | species | bacteria | bacteria | 329 |
| pseudomonas pseudoalcaligenes | 41 | species | bacteria | bacteria | 330 |
| xanthomonas | 109 | genus | bacteria | | 338 |
| azotobacter | 123 | genus | bacteria | | 352 |
| rhizobium | 164 | genus | bacteria | | 379 |
| methylobacterium | 65 | genus | bacteria | | 407 |
| gluconobacter | 43 | genus | bacteria | | 441 |
| legionella | 137 | genus | bacteria | | 445 |
| legionella pneumophila | 133 | species | bacteria | bacteria | 446 |
| fluoribacter bozemanae | 16 | species | bacteria | bacteria | 447 |
| legionella hackeliae | 3 | species | bacteria | bacteria | 449 |
| legionella longbeachae | 16 | species | bacteria | bacteria | 450 |
| tatlockia micdadei | 25 | species | bacteria | bacteria | 451 |
| legionella feeleii | 8 | species | bacteria | bacteria | 453 |
| legionella jordanis | 7 | species | bacteria | bacteria | 456 |
| legionella rubrilucens | 3 | species | bacteria | bacteria | 458 |
| fluoribacter | 11 | genus | bacteria | | 461 |
| fluoribacter dumoffii | 11 | species | bacteria | bacteria | 463 |
| fluoribacter gormanii | 14 | species | bacteria | bacteria | 464 |
| tatlockia | 7 | genus | bacteria | | 465 |
| legionella maceachernii | 7 | species | bacteria | bacteria | 466 |
| acinetobacter | 122 | genus | bacteria | | 469 |
| acinetobacter baumannii | 88 | species | bacteria | bacteria | 470 |
| acinetobacter calcoaceticus | 77 | species | bacteria | bacteria | 471 |
| moraxella | 93 | genus | bacteria | | 475 |
| moraxella bovis | 35 | species | bacteria | bacteria | 476 |
| moraxella lacunata | 14 | species | bacteria | bacteria | 477 |
| moraxella nonliquefaciens | 16 | species | bacteria | bacteria | 478 |
| moraxella catarrhalis | 87 | species | bacteria | bacteria | 480 |
| neisseria | 163 | genus | bacteria | | 482 |
| neisseria cinerea | 17 | species | bacteria | bacteria | 483 |
| neisseria flavescens | 11 | species | bacteria | bacteria | 484 |
| neisseria gonorrhoeae | 136 | species | bacteria | bacteria | 485 |
| neisseria lactamica | 31 | species | bacteria | bacteria | 486 |
| neisseria meningitidis | 130 | species | bacteria | bacteria | 487 |
| neisseria mucosa | 14 | species | bacteria | bacteria | 488 |
| neisseria sicca | 14 | species | bacteria | bacteria | 490 |
| neisseria elongata | 9 | species | bacteria | bacteria | 495 |
| psychrobacter | 28 | genus | bacteria | | 497 |
| kingella denitrificans | 9 | species | bacteria | bacteria | 502 |
| kingella kingae | 27 | species | bacteria | bacteria | 504 |
| alcaligenes | 132 | genus | bacteria | | 507 |
| bordetella | 126 | genus | bacteria | | 517 |
| bordetella bronchiseptica | 55 | species | bacteria | bacteria | 518 |
| bordetella parapertussis | 37 | species | bacteria | bacteria | 519 |
| bordetella pertussis | 122 | species | bacteria | bacteria | 520 |