| argentina | | uncultured methylobacterium sp. | species | 1 | 0 |
| australia | new south wales | uncultured methylobacterium sp. | species | 2 | 0 |
| brazil | | uncultured methylobacterium sp. | species | 8 | 0 |
| brazil | parana | uncultured methylobacterium sp. | species | 1 | 0 |
| brazil | rio de janeiro | uncultured methylobacterium sp. | species | 1 | 0 |
| canada | | uncultured methylobacterium sp. | species | 2 | 0 |
| canada | ontario | uncultured methylobacterium sp. | species | 1 | 0 |
| china | | uncultured methylobacterium sp. | species | 31 | 0 |
| china | guizhou | uncultured methylobacterium sp. | species | 1 | 0 |
| china | hunan | uncultured methylobacterium sp. | species | 14 | 0 |
| costa rica | | uncultured methylobacterium sp. | species | 71 | 0 |
| france | midi-pyrenees region | uncultured methylobacterium sp. | species | 3 | 0 |
| france | rhone-alpes region | uncultured methylobacterium sp. | species | 1 | 0 |
| germany | | uncultured methylobacterium sp. | species | 2 | 0 |
| greece | | uncultured methylobacterium sp. | species | 1 | 0 |
| india | | uncultured methylobacterium sp. | species | 25 | 0 |
| india | kerala | uncultured methylobacterium sp. | species | 6 | 0 |
| india | maharashtra | uncultured methylobacterium sp. | species | 1 | 0 |
| india | odisha | uncultured methylobacterium sp. | species | 1 | 0 |
| indonesia | | uncultured methylobacterium sp. | species | 3 | 0 |
| indonesia | south sumatra province | uncultured methylobacterium sp. | species | 1 | 0 |
| italy | | uncultured methylobacterium sp. | species | 1 | 0 |
| italy | aosta valley autonomous region | uncultured methylobacterium sp. | species | 3 | 0 |
| italy | tuscany region | uncultured methylobacterium sp. | species | 30 | 0 |
| japan | | uncultured methylobacterium sp. | species | 3 | 0 |
| japan | hokkaido prefecture | uncultured methylobacterium sp. | species | 292 | 0 |
| japan | ishikawa prefecture | uncultured methylobacterium sp. | species | 1 | 0 |
| japan | mie prefecture | uncultured methylobacterium sp. | species | 1 | 0 |
| japan | okayama prefecture | uncultured methylobacterium sp. | species | 1 | 0 |
| japan | tochigi prefecture | uncultured methylobacterium sp. | species | 1 | 0 |
| japan | tokushima prefecture | uncultured methylobacterium sp. | species | 3 | 0 |
| malaysia | sabah | uncultured methylobacterium sp. | species | 11 | 0 |
| mexico | | uncultured methylobacterium sp. | species | 12 | 0 |
| mexico | yucatan | uncultured methylobacterium sp. | species | 8 | 0 |
| mongolia | | uncultured methylobacterium sp. | species | 17 | 0 |
| namibia | | uncultured methylobacterium sp. | species | 4 | 0 |
| nigeria | | uncultured methylobacterium sp. | species | 8 | 0 |
| pakistan | punjab province | uncultured methylobacterium sp. | species | 1 | 0 |
| panama | | uncultured methylobacterium sp. | species | 2 | 0 |
| russia | zabaykalsky krai | uncultured methylobacterium sp. | species | 1 | 0 |
| south africa | | uncultured methylobacterium sp. | species | 2 | 0 |
| spain | | uncultured methylobacterium sp. | species | 9 | 0 |
| spain | andalusia | uncultured methylobacterium sp. | species | 1 | 0 |
| spain | balearic islands | uncultured methylobacterium sp. | species | 2 | 0 |
| sweden | uppsala | uncultured methylobacterium sp. | species | 2 | 0 |
| taiwan | | uncultured methylobacterium sp. | species | 2 | 0 |
| thailand | pathum thani province | uncultured methylobacterium sp. | species | 1 | 0 |
| turkey | | uncultured methylobacterium sp. | species | 2 | 0 |
| united kingdom | | uncultured methylobacterium sp. | species | 13 | 0 |
| united kingdom | england | uncultured methylobacterium sp. | species | 2 | 0 |
| united states | | uncultured methylobacterium sp. | species | 5 | 0 |
| united states | alaska | uncultured methylobacterium sp. | species | 20 | 0 |
| united states | california | uncultured methylobacterium sp. | species | 4 | 0 |
| united states | florida | uncultured methylobacterium sp. | species | 43 | 0 |
| united states | georgia | uncultured methylobacterium sp. | species | 1 | 0 |
| united states | kansas | uncultured methylobacterium sp. | species | 1 | 0 |
| united states | massachusetts | uncultured methylobacterium sp. | species | 35 | 0 |
| united states | michigan | uncultured methylobacterium sp. | species | 1 | 0 |
| united states | north carolina | uncultured methylobacterium sp. | species | 24 | 0 |
| united states | palmyra atoll | uncultured methylobacterium sp. | species | 1 | 0 |
| united states | south carolina | uncultured methylobacterium sp. | species | 5 | 0 |
| united states | virginia | uncultured methylobacterium sp. | species | 6 | 0 |
| united states minor outlying islands | palmyra atoll | uncultured methylobacterium sp. | species | 1 | 0 |