| china | guangxi | h9n3 subtype | no rank | 0 | 1 |
| france | | influenza a virus (a/mallard/france/2518/2001(h9n3)) | no rank | 1 | 0 |
| georgia | | influenza a virus (a/black-headed gull/georgia/5/2011(h9n3)) | no rank | 2 | 0 |
| georgia | | influenza a virus (a/mediterranean gull/georgia/1/2011(h9n3)) | no rank | 2 | 0 |
| georgia | guria region | influenza a virus (a/black-headed gull/georgia/5/2011(h9n3)) | no rank | 8 | 0 |
| georgia | guria region | influenza a virus (a/black-headed gull/republic of georgia/8/2011(h9n3)) | no rank | 8 | 0 |
| georgia | guria region | influenza a virus (a/mediterranean gull/georgia/1/2011(h9n3)) | no rank | 8 | 0 |
| united states | | influenza a virus (a/mallard duck/ohio/16os0875/2016(h9n3)) | no rank | 8 | 0 |
| vietnam | | influenza a virus (a/duck/viet nam/340/2001(h9n3)) | no rank | 1 | 0 |
| vietnam | | influenza a virus (a/duck/viet nam/68/2001(h9n3)) | no rank | 1 | 0 |