| algeria | guelma province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| argentina | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| australia | | klebsiella pneumoniae subsp. pneumoniae kpmdu1 | no rank | 522 | 0 |
| australia | victoria | klebsiella pneumoniae subsp. pneumoniae | subspecies | 14 | 0 |
| austria | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 9 | 0 |
| bangladesh | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| belgium | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 3 | 0 |
| brazil | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 230 | 0 |
| brazil | | klebsiella pneumoniae subsp. pneumoniae kp13 | no rank | 14 | 0 |
| brazil | amazonas | klebsiella pneumoniae subsp. pneumoniae | subspecies | 474 | 0 |
| brazil | bahia | klebsiella pneumoniae subsp. pneumoniae | subspecies | 86 | 0 |
| brazil | parana | klebsiella pneumoniae subsp. pneumoniae | subspecies | 479 | 0 |
| brazil | pernambuco | klebsiella pneumoniae subsp. pneumoniae | subspecies | 138 | 0 |
| brazil | rio de janeiro | klebsiella pneumoniae subsp. pneumoniae | subspecies | 10 | 0 |
| brazil | rio grande do sul | klebsiella pneumoniae subsp. pneumoniae | subspecies | 10 | 0 |
| brazil | sao paulo | klebsiella pneumoniae subsp. pneumoniae | subspecies | 432 | 0 |
| bulgaria | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| chile | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 17 | 0 |
| chile | biobio region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 404 | 0 |
| chile | santiago metropolitan region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| china | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 107 | 0 |
| china | | klebsiella pneumoniae subsp. pneumoniae 12-3578 | no rank | 368 | 0 |
| china | anhui | klebsiella pneumoniae subsp. pneumoniae | subspecies | 15 | 0 |
| china | beijing | klebsiella pneumoniae subsp. pneumoniae | subspecies | 4 | 0 |
| china | guangdong | klebsiella pneumoniae subsp. pneumoniae | subspecies | 12 | 0 |
| china | jiangxi | klebsiella pneumoniae subsp. pneumoniae | subspecies | 152 | 0 |
| china | shandong | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| china | shanghai shi | klebsiella pneumoniae subsp. pneumoniae | subspecies | 215 | 0 |
| china | shanghai shi | klebsiella pneumoniae subsp. pneumoniae lz | no rank | 394 | 0 |
| china | sichuan | klebsiella pneumoniae subsp. pneumoniae | subspecies | 17546 | 0 |
| china | yunnan | klebsiella pneumoniae subsp. pneumoniae | subspecies | 816 | 0 |
| china | zhejiang | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| cuba | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| czech republic | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| denmark | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 27 | 0 |
| dominican republic | santo domingo province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 69 | 0 |
| egypt | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 774 | 0 |
| egypt | gharbia governorate | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1848 | 0 |
| egypt | suez governorate | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| france | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 53 | 0 |
| france | provence-alpes-cote d'azur region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 140 | 0 |
| germany | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 142 | 0 |
| greece | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 7 | 0 |
| greece | attica region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| greece | central macedonia region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| hong kong | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| india | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 3023 | 0 |
| india | jharkhand | klebsiella pneumoniae subsp. pneumoniae | subspecies | 3 | 0 |
| india | tamil nadu | klebsiella pneumoniae subsp. pneumoniae | subspecies | 5 | 0 |
| india | west bengal | klebsiella pneumoniae subsp. pneumoniae | subspecies | 37 | 0 |
| indonesia | bali province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| iran | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 72 | 0 |
| iran | hormozgan province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 26 | 0 |
| iran | kermanshah province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 4 | 0 |
| iraq | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 28 | 0 |
| israel | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| israel | tel aviv district | klebsiella pneumoniae subsp. pneumoniae st258-490 | no rank | 1140 | 0 |
| italy | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 208 | 0 |
| italy | emilia-romagna region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 4 | 0 |
| italy | emilia-romagna region | klebsiella pneumoniae subsp. pneumoniae kkbo-1 | no rank | 316 | 0 |
| italy | emilia-romagna region | klebsiella pneumoniae subsp. pneumoniae kkbo-4 | no rank | 285 | 0 |
| italy | emilia-romagna region | klebsiella pneumoniae subsp. pneumoniae kpb-1 | no rank | 255 | 0 |
| italy | emilia-romagna region | klebsiella pneumoniae subsp. pneumoniae kpb-2 | no rank | 275 | 0 |
| italy | lazio region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 53 | 0 |
| italy | liguria region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 406 | 0 |
| italy | lombardy region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 123 | 0 |
| italy | piemonte region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 81 | 0 |
| italy | sicily autonomous region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 247 | 0 |
| italy | tuscany region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 7398 | 0 |
| italy | veneto region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| japan | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2484 | 0 |
| kenya | nyanza province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| libya | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| libya | sabha district | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| madagascar | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 64 | 0 |
| madagascar | analamanga region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 569 | 0 |
| madagascar | atsinanana region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 303 | 0 |
| malaysia | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| malaysia | selangor | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| nigeria | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| norway | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| pakistan | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 20639 | 0 |
| pakistan | punjab province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 930 | 0 |
| poland | lower silesia province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| portugal | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| portugal | porto district | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1352 | 0 |
| romania | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| russia | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 568 | 0 |
| russia | moscow city | klebsiella pneumoniae subsp. pneumoniae | subspecies | 32 | 0 |
| russia | saint petersburg | klebsiella pneumoniae subsp. pneumoniae | subspecies | 14 | 0 |
| saudi arabia | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 18 | 0 |
| singapore | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 23 | 0 |
| south africa | kwazulu-natal province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 6649 | 0 |
| south korea | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 13 | 0 |
| south korea | | klebsiella pneumoniae subsp. pneumoniae mp14 | no rank | 374 | 0 |
| south korea | seoul city | klebsiella pneumoniae subsp. pneumoniae | subspecies | 8 | 0 |
| spain | | klebsiella pneumoniae subsp. pneumoniae 1158 | no rank | 3 | 0 |
| spain | andalusia | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| spain | madrid | klebsiella pneumoniae subsp. pneumoniae kpo3210 | no rank | 6705 | 0 |
| spain | madrid | klebsiella pneumoniae subsp. pneumoniae kpq15 | no rank | 170 | 0 |
| spain | madrid | klebsiella pneumoniae subsp. pneumoniae kpq24 | no rank | 298 | 0 |
| spain | madrid | klebsiella pneumoniae subsp. pneumoniae kpq3 | no rank | 92 | 0 |
| switzerland | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| switzerland | geneva region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1732 | 0 |
| switzerland | st. gallen region | klebsiella pneumoniae subsp. pneumoniae | subspecies | 215 | 0 |
| taiwan | | klebsiella pneumoniae subsp. pneumoniae 1158 | no rank | 2 | 0 |
| taiwan | | klebsiella pneumoniae subsp. pneumoniae ntuh-k2044 | no rank | 6 | 0 |
| thailand | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 18576 | 0 |
| thailand | bangkok | klebsiella pneumoniae subsp. pneumoniae | subspecies | 8726 | 0 |
| thailand | chachoengsao province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 173 | 0 |
| thailand | lamphun province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1922 | 0 |
| thailand | nakhon pathom province | klebsiella pneumoniae subsp. pneumoniae | subspecies | 809 | 0 |
| tunisia | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1 | 0 |
| turkey | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 12 | 0 |
| united kingdom | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 324 | 0 |
| united kingdom | england | klebsiella pneumoniae subsp. pneumoniae | subspecies | 503 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 43 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kp5-1 | no rank | 3 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih1 | no rank | 70 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih10 | no rank | 27 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih11 | no rank | 372 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih12 | no rank | 330 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih14 | no rank | 332 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih16 | no rank | 358 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih17 | no rank | 276 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih18 | no rank | 336 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih19 | no rank | 404 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih2 | no rank | 296 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih20 | no rank | 312 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih21 | no rank | 358 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih22 | no rank | 332 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih23 | no rank | 678 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih24 | no rank | 8 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih27 | no rank | 12 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih4 | no rank | 348 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih5 | no rank | 338 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih6 | no rank | 300 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih7 | no rank | 322 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih8 | no rank | 366 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpnih9 | no rank | 232 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae kpr0928 | no rank | 6 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae pittndm01 | no rank | 10 | 0 |
| united states | | klebsiella pneumoniae subsp. pneumoniae ukkv901664 | no rank | 402 | 0 |
| united states | florida | klebsiella pneumoniae subsp. pneumoniae | subspecies | 26 | 0 |
| united states | michigan | klebsiella pneumoniae subsp. pneumoniae | subspecies | 3901 | 0 |
| united states | michigan | klebsiella pneumoniae subsp. pneumoniae ntuh-k2044 | no rank | 1 | 0 |
| united states | new york | klebsiella pneumoniae subsp. pneumoniae | subspecies | 248 | 0 |
| united states | ohio | klebsiella pneumoniae subsp. pneumoniae | subspecies | 32709 | 0 |
| united states | pennsylvania | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1198 | 0 |
| united states | texas | klebsiella pneumoniae subsp. pneumoniae | subspecies | 1453 | 0 |
| united states | washington | klebsiella pneumoniae subsp. pneumoniae | subspecies | 3350 | 0 |
| uruguay | | klebsiella pneumoniae subsp. pneumoniae | subspecies | 2 | 0 |
| uruguay | montevideo department | klebsiella pneumoniae subsp. pneumoniae | subspecies | 782 | 0 |