| algeria | | uncultured acaryochloris sp. | species | 1 | 0 |
| antarctica | | unidentified cyanobacterium 'placopsis parellina cyanobiont' ess 21657-1 | species | 1 | 0 |
| antarctica | | unidentified cyanobacterium 'placopsis parellina cyanobiont' ess 21657-2 | species | 1 | 0 |
| antarctica | | unidentified cyanobacterium 'placopsis parellina cyanobiont' n0023-1 | species | 1 | 0 |
| antarctica | | unidentified cyanobacterium 'placopsis parellina cyanobiont' n0023-2 | species | 1 | 0 |
| australia | new south wales | acaryochloris sp. mpgrs1 | species | 1 | 0 |
| australia | new south wales | cyanobacterium aucy1 | species | 1 | 0 |
| australia | new south wales | cyanobacterium aucy2 | species | 1 | 0 |
| australia | new south wales | cyanobacterium aucy3 | species | 1 | 0 |
| australia | new south wales | cyanobacterium aucy4 | species | 1 | 0 |
| australia | new south wales | cyanobacterium aucy5 | species | 1 | 0 |
| australia | queensland | acaryochloris sp. hicr111a | species | 10 | 0 |
| australia | queensland | uncultured acaryochloris sp. | species | 142 | 0 |
| australia | south australia | acaryochloris | genus | 0 | 1 |
| australia | western australia | acaryochloris | genus | 0 | 1 |
| australia | western australia | uncultured acaryochloris sp. | species | 1 | 0 |
| bahamas | | candidatus acaryochloris bahamiensis | species | 35 | 0 |
| brazil | rio de janeiro | uncultured acaryochloris sp. | species | 2 | 0 |
| canada | alberta | cyanobacteria bacterium uba4093 | species | 1 | 0 |
| canada | nunavut | cyanobacterium ccla-1 | species | 1 | 0 |
| canada | nunavut | cyanobacterium ccla-17 | species | 1 | 0 |
| canada | nunavut | cyanobacterium ccla-4 | species | 46 | 0 |
| canada | nunavut | cyanobacterium cla-1 | species | 1 | 0 |
| canada | nunavut | cyanobacterium cla-10 | species | 1 | 0 |
| chile | | cyanobacterium utex b 3001 | species | 1 | 0 |
| chile | | cyanobacterium utex b 3002 | species | 1 | 0 |
| chile | | cyanobacterium utex b 3003 | species | 1 | 0 |
| chile | | cyanobacterium utex b 3004 | species | 1 | 0 |
| chile | atacama region | coccoid cyanobacterium ata3-12-rm3 | species | 2 | 0 |
| chile | atacama region | coccoid cyanobacterium ata3-12-rm4 | species | 3 | 0 |
| chile | atacama region | coccoid cyanobacterium ata3-12-rm5 | species | 2 | 0 |
| chile | atacama region | coccoid cyanobacterium ata3-5q-ko9 | species | 2 | 0 |
| chile | atacama region | coccoid cyanobacterium ata6-11-rm1 | species | 2 | 0 |
| chile | atacama region | coccoid cyanobacterium ata8-1-rm1 | species | 3 | 0 |
| china | | acaryochloris sp. zj0205b98 | species | 1 | 0 |
| china | fujian | sinocapsa zengkensis chab6751 | no rank | 25 | 0 |
| china | tianjin shi | cyanobacterium tdx16 | species | 8057 | 0 |
| china | tibet | cyanobacterium r16-1 | species | 1 | 0 |
| china | tibet | cyanobacterium r16-3 | species | 1 | 0 |
| costa rica | | filamentous cyanobacterium lli71 | species | 1 | 0 |
| costa rica | | unicellular cyanobacterium lli67 | species | 1 | 0 |
| czech republic | | acaryochloris sp. jj7-5 | species | 1 | 0 |
| india | | cyanobacteria bacterium nionpe | species | 1 | 0 |
| india | | cyanobacteria bacterium nionpl | species | 1 | 0 |
| india | | cyanobacterium mbtd-cmfri-s041 | species | 1 | 0 |
| india | | cyanobacterium pm1 | species | 1 | 0 |
| india | west bengal | cyanobacterium ap9f | species | 2 | 0 |
| india | west bengal | filamentous cyanobacterium ap3 | species | 8 | 0 |
| india | west bengal | filamentous cyanobacterium ap3b | species | 9 | 0 |
| iraq | | uncultured acaryochloris sp. | species | 1 | 0 |
| israel | southern district | cyanobacterium bgl12_3s_black | species | 1 | 0 |
| israel | southern district | cyanobacterium bgl12_3s_purple | species | 1 | 0 |
| israel | southern district | cyanobacterium bgl12_3s_red | species | 341 | 0 |
| japan | ibaraki prefecture | cyanobacterium endosymbiont of epithemia sorex | species | 1 | 0 |
| japan | ibaraki prefecture | cyanobacterium endosymbiont of rhopalodia gibba | species | 2 | 0 |
| japan | ibaraki prefecture | cyanobacterium endosymbiont of rhopalodia gibberula | species | 1 | 0 |
| japan | tochigi prefecture | cyanobacterium endosymbiont of epithemia turgida | species | 1 | 0 |
| japan | tochigi prefecture | cyanobacterium endosymbiont of epithemia turgida isolate etsb lake yunoko | no rank | 2 | 0 |
| japan | tokyo prefecture | unidentified cyanobacterium ok02 | species | 1 | 0 |
| japan | tokyo prefecture | unidentified cyanobacterium ok03 | species | 1 | 0 |
| japan | tokyo prefecture | unidentified cyanobacterium ok05 | species | 1 | 0 |
| japan | yamanashi prefecture | cyanobacterium endosymbiont of epithemia turgida | species | 1 | 0 |
| kenya | | cyanobacteria bacterium uba4641 | species | 1 | 0 |
| kenya | | cyanobacteria bacterium uba6393 | species | 1 | 0 |
| kenya | | cyanobacteria bacterium uba6446 | species | 1 | 0 |
| kenya | | cyanobacteria bacterium uba7562 | species | 1 | 0 |
| kenya | | cyanobacteria bacterium uba791 | species | 1 | 0 |
| kuwait | | acaryochloris sp. kuac 3106 | species | 1 | 0 |
| new zealand | | cyanobacterial symbiont my17 (host: mycale sp.) | species | 1 | 0 |
| new zealand | | cyanobacterial symbiont my2 (host: mycale sp.) | species | 1 | 0 |
| new zealand | | cyanobacterial symbiont my3 (host: mycale sp.) | species | 1 | 0 |
| new zealand | | cyanobacterial symbiont my4 (host: mycale sp.) | species | 1 | 0 |
| palau | | uncultured acaryochloris sp. | species | 15 | 0 |
| portugal | | uncultured acaryochloris sp. | species | 2 | 0 |
| puerto rico | barceloneta | cyanobiont zac 1e of zamia amblyphyllidia | species | 1 | 0 |
| puerto rico | barceloneta | cyanobiont zac 2d of zamia amblyphyllidia | species | 1 | 0 |
| puerto rico | barceloneta | cyanobiont zac 3b of zamia amblyphyllidia | species | 1 | 0 |
| puerto rico | barceloneta | cyanobiont zac 3c of zamia amblyphyllidia | species | 1 | 0 |
| puerto rico | barceloneta | cyanobiont zac 4a of zamia amblyphyllidia | species | 1 | 0 |
| puerto rico | barceloneta | cyanobiont zac 4c of zamia amblyphyllidia | species | 1 | 0 |
| puerto rico | barceloneta | cyanobiont zac 4d of zamia amblyphyllidia | species | 1 | 0 |
| puerto rico | barceloneta | cyanobiont zac 5b of zamia amblyphyllidia | species | 1 | 0 |
| puerto rico | juana diaz | cyanobiont zpjd 1a of zamia pumila | species | 1 | 0 |
| puerto rico | juana diaz | cyanobiont zpjd 1c of zamia pumila | species | 1 | 0 |
| puerto rico | juana diaz | cyanobiont zpjd 2b of zamia pumila | species | 1 | 0 |
| puerto rico | sabana grande | cyanobiont zpqp 39b of zamia portoricensis | species | 1 | 0 |
| puerto rico | sabana grande | cyanobiont zpqp 42d of zamia portoricensis | species | 1 | 0 |
| puerto rico | sabana grande | cyanobiont zps 38a of zamia portoricensis | species | 1 | 0 |
| puerto rico | sabana grande | cyanobiont zps 38c of zamia portoricensis | species | 1 | 0 |
| spain | | cyanobacterium eb02 | species | 1 | 0 |
| spain | | cyanobacterium ebd07 | species | 1 | 0 |
| spain | | cyanobacterium ebd09 | species | 1 | 0 |
| spain | | cyanobacterium ebd11 | species | 1 | 0 |
| spain | | cyanobacterium ebd14 | species | 1 | 0 |
| spain | canary islands | cyanobacterium lanzarote | species | 1 | 0 |
| sri lanka | | chroococcales cyanobacterium k14 | species | 1 | 0 |
| sri lanka | | cyanobacterium k10 | species | 1 | 0 |
| sri lanka | | cyanobacterium k16 | species | 1 | 0 |
| sri lanka | | filamentous cyanobacterium hm15 | species | 1 | 0 |
| sri lanka | | filamentous cyanobacterium hm16 | species | 1 | 0 |
| sri lanka | | filamentous cyanobacterium wps6 | species | 1 | 0 |
| sri lanka | | oscillatoriales cyanobacterium wk3 | species | 1 | 0 |
| sri lanka | | unicellular cyanobacterium dpw7 | species | 1 | 0 |
| sri lanka | | unicellular cyanobacterium hm4 | species | 1 | 0 |
| sri lanka | | unicellular cyanobacterium k3 | species | 1 | 0 |
| sri lanka | | unicellular cyanobacterium smis2 | species | 1 | 0 |
| sri lanka | | xenococcus sp. k12 | species | 1 | 0 |
| sri lanka | | xenococcus sp. smis5 | species | 1 | 0 |
| tanzania | zanzibar urban/west region | unicellular cyanobacterium su2 | species | 87 | 0 |
| tanzania | zanzibar urban/west region | unicellular cyanobacterium su3 | species | 450 | 0 |
| turkey | | thermophilic cyanobacterium 120 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 200 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 210 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 230 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 250 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 260 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 280 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 340 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 400 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 430 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 600 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 700 | species | 1 | 0 |
| turkey | | thermophilic cyanobacterium 900 | species | 1 | 0 |
| turkey | | unicellular cyanobacterium 9 | species | 1 | 0 |
| u.s. virgin islands | saint croix island | cyanobacterium sc-1 | species | 1 | 0 |
| united states | | cyanobacterium cbs1101 | species | 2 | 0 |
| united states | | cyanobacterium cbs1104 | species | 2 | 0 |
| united states | | cyanobacterium cbs1105 | species | 2 | 0 |
| united states | | cyanobacterium cbw1001 | species | 2 | 0 |
| united states | | cyanobacterium cbw1002 | species | 2 | 0 |
| united states | | cyanobacterium cbw1003 | species | 2 | 0 |
| united states | | cyanobacterium cbw1004 | species | 2 | 0 |
| united states | | cyanobacterium cbw1005 | species | 2 | 0 |
| united states | | cyanobacterium cbw1006 | species | 2 | 0 |
| united states | | cyanobacterium cbw1007 | species | 2 | 0 |
| united states | | cyanobacterium cbw1101 | species | 2 | 0 |
| united states | | cyanobacterium cbw1102 | species | 2 | 0 |
| united states | | cyanobacterium cbw1103 | species | 2 | 0 |
| united states | | cyanobacterium cbw1104 | species | 2 | 0 |
| united states | | cyanobacterium cbw1105 | species | 2 | 0 |
| united states | | cyanobacterium cbw1106 | species | 2 | 0 |
| united states | | cyanobacterium cbw1107 | species | 2 | 0 |
| united states | | cyanobacterium cbw1108 | species | 2 | 0 |
| united states | | cyanobacterium cbw1110 | species | 2 | 0 |
| united states | | cyanobacterium cbw1111 | species | 2 | 0 |
| united states | | cyanobacterium cbw1112 | species | 2 | 0 |
| united states | | cyanobacterium cbw1113 | species | 2 | 0 |
| united states | | cyanobacterium cbw1114 | species | 2 | 0 |
| united states | | cyanobacterium cbw1115 | species | 2 | 0 |
| united states | | cyanobacterium cbw1116 | species | 2 | 0 |
| united states | | cyanobacterium cbw1117 | species | 2 | 0 |
| united states | | cyanobacterium cbw1118 | species | 1 | 0 |
| united states | california | coccoid cyanobacterium cmt-2brin-npc43b | species | 3 | 0 |
| united states | california | coccoid cyanobacterium cmt-2fbin-npc27 | species | 1 | 0 |
| united states | california | coccoid cyanobacterium cmt-3brin-npc107 | species | 3 | 0 |
| united states | california | coccoid cyanobacterium cmt-3brin-npc109 | species | 2 | 0 |
| united states | california | coccoid cyanobacterium cmt-3brin-npc110 | species | 1 | 0 |
| united states | california | coccoid cyanobacterium cmt-3brin-npc115 | species | 2 | 0 |
| united states | california | coccoid cyanobacterium cmt-3brin-npc116 | species | 1 | 0 |
| united states | california | coccoid cyanobacterium cmt-3brin-npc52 | species | 1 | 0 |
| united states | california | coccoid cyanobacterium cmt-3fbin-npc1 | species | 1 | 0 |
| united states | california | coccoid cyanobacterium cmt-3fbin-npc3 | species | 1 | 0 |
| united states | california | coccoid cyanobacterium cmt-3fbin-npc30 | species | 2 | 0 |
| united states | california | coccoid cyanobacterium cmt-3fdin-npc31 | species | 2 | 0 |
| united states | california | coccoid cyanobacterium hutten-14135-np6b | species | 2 | 0 |
| united states | california | coccoid cyanobacterium hutten-14142-np4 | species | 2 | 0 |
| united states | california | coccoid cyanobacterium wmt-wp5-np15 | species | 1 | 0 |
| united states | california | coccoid cyanobacterium wmt-wp5-np32 | species | 2 | 0 |
| united states | florida | cyanobacteria bacterium uba6050 | species | 1 | 0 |
| united states | florida | cyanobacterium 62-2 | species | 1 | 0 |
| united states | florida | cyanobacterium osc | species | 1 | 0 |
| united states | maryland | cyanobacterium cbw1002 | species | 2 | 0 |
| united states | maryland | cyanobacterium cbw1004 | species | 2 | 0 |
| united states | maryland | cyanobacterium cbw1006 | species | 2 | 0 |
| united states | maryland | cyanobacterium cbw1108 | species | 2 | 0 |
| united states | pennsylvania | cyanobacteria bacterium mbx9-1 | species | 1 | 0 |
| united states | utah | coccoid cyanobacterium ufs-a1-bi-npmv-1b4 | species | 5 | 0 |
| united states | vermont | cyanobacteria bacterium uba5018 | species | 1 | 0 |
| united states | wyoming | cyanobacteria bacterium uba7275 | species | 1 | 0 |
| united states | wyoming | cyanobacteria bacterium uba7733 | species | 1 | 0 |
| united states | wyoming | cyanobacteria bacterium uba7753 | species | 1 | 0 |
| united states | wyoming | cyanobacteria bacterium uba7768 | species | 1 | 0 |
| united states | wyoming | cyanobacteria bacterium uba7778 | species | 1 | 0 |