| antarctica | | geminigera cryophila | species | 8 | 0 |
| antarctica | | uncultured cryptophyte | species | 37 | 0 |
| antarctica | | uncultured geminigeraceae | species | 1 | 0 |
| antarctica | | uncultured pyrenomonadales | species | 1 | 0 |
| australia | | rhodomonas sp. cs24 | species | 1 | 0 |
| australia | victoria | cryptomonas pyrenoidifera | species | 2 | 0 |
| austria | | cryptomonas commutata | species | 1 | 0 |
| austria | | cryptomonas erosa | species | 8 | 0 |
| austria | | cryptomonas sp. ccac 0109 | species | 2 | 0 |
| austria | | uncultured cryptophyte | species | 1 | 0 |
| austria | burgenland | cryptomonas ovata | species | 2 | 0 |
| canada | | uncultured cryptophyte | species | 6 | 0 |
| canada | quebec | uncultured cryptomonas | species | 2 | 0 |
| china | | chroomonas sp. | species | 2 | 0 |
| china | | cryptomonas curvata | species | 1 | 0 |
| china | | proteomonas sulcata | species | 4 | 0 |
| china | | uncultured cryptomonadaceae | species | 2 | 0 |
| china | | uncultured cryptophyte | species | 74 | 0 |
| czech republic | | cryptomonas obovoidea | species | 2 | 0 |
| czech republic | | cryptomonas pyrenoidifera | species | 2 | 0 |
| czech republic | prague city | chroomonas nordstedtii | species | 2 | 0 |
| denmark | | cryptomonas borealis | species | 2 | 0 |
| denmark | | cryptomonas tetrapyrenoidosa | species | 1 | 0 |
| denmark | | plagioselmis prolonga | species | 2 | 0 |
| denmark | | rhodomonas baltica | species | 1 | 0 |
| denmark | | teleaulax amphioxeia | species | 2 | 0 |
| denmark | central denmark region | cryptomonas sp. m1634 | species | 3 | 0 |
| denmark | central denmark region | cryptomonas tetrapyrenoidosa | species | 1 | 0 |
| denmark | region zealand | cryptomonas sp. m1634 | species | 1 | 0 |
| finland | | cryptomonas erosa | species | 1 | 0 |
| finland | | uncultured cryptomonadaceae | species | 1 | 0 |
| france | | uncultured cryptomonas-like cryptophyte | species | 4 | 0 |
| france | | uncultured teleaulax-like cryptophyte | species | 1 | 0 |
| germany | | cryptomonas erosa | species | 2 | 0 |
| germany | | cryptomonas gyropyrenoidosa | species | 1 | 0 |
| germany | | cryptomonas obovoidea | species | 1 | 0 |
| germany | | cryptomonas ovata | species | 2 | 0 |
| germany | | cryptomonas paramecium | species | 2 | 0 |
| germany | | cryptomonas pyrenoidifera | species | 4 | 0 |
| germany | | cryptomonas tetrapyrenoidosa | species | 2 | 0 |
| germany | | uncultured cryptophyte | species | 1 | 0 |
| germany | bavaria | cryptomonas erosa | species | 4 | 0 |
| germany | bavaria | cryptomonas loricata | species | 450 | 0 |
| germany | bavaria | cryptomonas sp. m2807 | species | 2 | 0 |
| germany | berlin | cryptomonas obovoidea | species | 2 | 0 |
| germany | brandenburg | cryptomonas cf. phaseolus | species | 1 | 0 |
| germany | brandenburg | cryptomonas curvata | species | 2 | 0 |
| germany | brandenburg | cryptomonas phaseolus | species | 1 | 0 |
| germany | north rhine-westphalia | chroomonas nordstedtii | species | 6 | 0 |
| germany | north rhine-westphalia | chroomonas sp. | species | 1 | 0 |
| germany | north rhine-westphalia | cryptomonas borealis | species | 4 | 0 |
| germany | north rhine-westphalia | cryptomonas commutata | species | 3 | 0 |
| germany | north rhine-westphalia | cryptomonas curvata | species | 6 | 0 |
| germany | north rhine-westphalia | cryptomonas gyropyrenoidosa | species | 1 | 0 |
| germany | north rhine-westphalia | cryptomonas loricata | species | 2 | 0 |
| germany | north rhine-westphalia | cryptomonas lundii | species | 4 | 0 |
| germany | north rhine-westphalia | cryptomonas marssonii | species | 297 | 0 |
| germany | north rhine-westphalia | cryptomonas obovoidea | species | 3 | 0 |
| germany | north rhine-westphalia | cryptomonas paramecium | species | 2 | 0 |
| germany | north rhine-westphalia | cryptomonas phaseolus | species | 4 | 0 |
| germany | north rhine-westphalia | cryptomonas pyrenoidifera | species | 3 | 0 |
| germany | north rhine-westphalia | cryptomonas sp. m2290 | species | 2 | 0 |
| germany | north rhine-westphalia | cryptomonas sp. m2504 | species | 2 | 0 |
| germany | north rhine-westphalia | cryptomonas tetrapyrenoidosa | species | 3 | 0 |
| germany | rhineland-palatinate | cryptomonas erosa | species | 2 | 0 |
| germany | rhineland-palatinate | cryptomonas sp. m2195 | species | 4 | 0 |
| germany | saxony-anhalt | cryptomonas loricata | species | 2 | 0 |
| germany | saxony-anhalt | cryptomonas sp. m2089 | species | 2 | 0 |
| germany | schleswig-holstein | cryptomonas marssonii | species | 2 | 0 |
| germany | thuringen | cryptomonas borealis | species | 1 | 0 |
| greece | | rhodomonas sp. m1480 | species | 1 | 0 |
| india | | teleaulax amphioxeia | species | 1 | 0 |
| india | | uncultured cryptomonadaceae | species | 3 | 0 |
| ireland | | rhodomonas sp. | species | 1 | 0 |
| japan | | geminigera cryophila | species | 1 | 0 |
| japan | | teleaulax amphioxeia | species | 1 | 0 |
| japan | | uncultured cryptophyte | species | 20 | 0 |
| japan | chiba prefecture | chroomonas caudata | species | 3 | 0 |
| japan | chiba prefecture | chroomonas nordstedtii | species | 1 | 0 |
| japan | hiroshima prefecture | cryptomonas tetrapyrenoidosa | species | 4 | 0 |
| japan | hokkaido prefecture | chroomonas coerulea | species | 3 | 0 |
| japan | hokkaido prefecture | chroomonas nordstedtii | species | 10 | 0 |
| japan | hokkaido prefecture | chroomonas sp. ainosato 140417 | species | 1 | 0 |
| japan | hokkaido prefecture | chroomonas sp. ak01 | species | 1 | 0 |
| japan | hokkaido prefecture | chroomonas sp. dc01 | species | 5 | 0 |
| japan | hokkaido prefecture | chroomonas sp. docho 140919 | species | 1 | 0 |
| japan | hokkaido prefecture | chroomonas sp. onl01 | species | 1 | 0 |
| japan | hokkaido prefecture | chroomonas sp. or05 | species | 1 | 0 |
| japan | hokkaido prefecture | chroomonas sp. sd07 | species | 1 | 0 |
| japan | hokkaido prefecture | chroomonas sp. skl01 | species | 1 | 0 |
| japan | hokkaido prefecture | hemiselmis sp. or06 | species | 1 | 0 |
| japan | hokkaido prefecture | teleaulax acuta | species | 4 | 0 |
| japan | hokkaido prefecture | uncultured cryptophyte | species | 7 | 0 |
| japan | ibaraki prefecture | chroomonas nordstedtii | species | 1 | 0 |
| japan | miyagi ken prefecture | goniomonas sp. tgkh7 | species | 1 | 0 |
| japan | miyagi ken prefecture | uncultured cryptophyte | species | 12 | 0 |
| japan | nagano prefecture | chroomonas coerulea | species | 6 | 0 |
| japan | nagano prefecture | chroomonas nordstedtii | species | 1 | 0 |
| japan | oita prefecture | teleaulax amphioxeia | species | 3 | 0 |
| japan | okinawa prefecture | chroomonas sp. od06 | species | 1 | 0 |
| japan | shiga prefecture | uncultured cryptomonas | species | 55 | 0 |
| japan | wakayama prefecture | chroomonas mesostigmatica | species | 1 | 0 |
| japan | yamagata prefecture | chroomonas sp. hrl01 | species | 1 | 0 |
| luxembourg | | uncultured cryptomonas | species | 48 | 0 |
| luxembourg | | uncultured cryptophyte | species | 11 | 0 |
| luxembourg | | uncultured geminigera | species | 16 | 0 |
| luxembourg | | uncultured teleaulax | species | 4 | 0 |
| malaysia | | rhodomonas salina | species | 1 | 0 |
| portugal | coimbra district | chroomonas coerulea | species | 3 | 0 |
| russia | | cryptomonas curvata | species | 12 | 0 |
| russia | | cryptomonas erosa | species | 3 | 0 |
| russia | | cryptomonas gyropyrenoidosa | species | 6 | 0 |
| russia | | cryptomonas loricata | species | 3 | 0 |
| russia | | cryptomonas lundii | species | 7 | 0 |
| russia | | cryptomonas obovoidea | species | 3 | 0 |
| russia | | cryptomonas ovata | species | 5 | 0 |
| russia | | cryptomonas phaseolus | species | 3 | 0 |
| russia | | cryptomonas platyuris | species | 4 | 0 |
| russia | | cryptomonas pyrenoidifera | species | 6 | 0 |
| russia | | cryptomonas tetrapyrenoidosa | species | 3 | 0 |
| russia | irkutsk oblast | uncultured cryptophyte | species | 1 | 0 |
| russia | yaroslavl oblast | goniomonas truncata | species | 1 | 0 |
| south korea | | chroomonas sp. | species | 6 | 0 |
| south korea | | rhodomonas sp. | species | 5 | 0 |
| south korea | | teleaulax acuta | species | 2 | 0 |
| south korea | | teleaulax amphioxeia | species | 7 | 0 |
| south korea | busan city | uncultured marine cryptophyte | species | 2 | 0 |
| spain | | falcomonas sp. nr-2011 | species | 2 | 0 |
| spain | | hemiselmis sp. nr-2011 | species | 1 | 0 |
| spain | | teleaulax sp. nr-2011 | species | 1 | 0 |
| spain | andalusia | teleaulax amphioxeia | species | 1 | 0 |
| sweden | | cryptomonas lundii | species | 1 | 0 |
| switzerland | | cryptomonas paramecium | species | 2 | 0 |
| switzerland | | uncultured cryptomonadaceae | species | 1 | 0 |
| taiwan | | cryptomonas obovoidea | species | 2 | 0 |
| united kingdom | | cryptomonas paramecium | species | 1 | 0 |
| united kingdom | england | cryptomonas curvata | species | 227 | 0 |
| united kingdom | england | cryptomonas paramecium | species | 4 | 0 |
| united kingdom | england | goniomonas amphinema | species | 1 | 0 |
| united kingdom | england | goniomonas sp. sh-8 | species | 1 | 0 |
| united kingdom | england | goniomonas sp. sh-9 | species | 1 | 0 |
| united kingdom | england | rhodomonas salina | species | 1 | 0 |
| united kingdom | wales | chroomonas sp. sag 980-1 | species | 1 | 0 |
| united kingdom | wales | goniomonas aff. amphinema | species | 1 | 0 |
| united states | | cryptomonas ovata | species | 1 | 0 |
| united states | | cryptophyta sp. cr-mal06 | species | 1 | 0 |
| united states | | uncultured cryptophyte | species | 1673 | 0 |
| united states | colorado | chroomonas coerulea | species | 1 | 0 |
| united states | michigan | cryptomonas obovoidea | species | 2 | 0 |
| united states | washington | falcomonas daucoides | species | 1 | 0 |