| australia | | atopobium fossor dsm 15642 | no rank | 4 | 0 |
| australia | victoria | atopobium | genus | 0 | 1 |
| belgium | | atopobium vaginae | species | 1 | 0 |
| brazil | | uncultured atopobium sp. | species | 2 | 0 |
| canada | ontario | uncultured atopobium sp. | species | 2 | 0 |
| china | | uncultured atopobium sp. | species | 8 | 0 |
| china | beijing | atopobium vaginae | species | 7 | 0 |
| china | hunan | atopobium sp. uba5378 | species | 1 | 0 |
| france | | atopobium minutum | species | 2 | 0 |
| france | provence-alpes-cote d'azur region | atopobium rimae | species | 1 | 0 |
| hong kong | | atopobium | genus | 0 | 1 |
| japan | | uncultured atopobium sp. | species | 7 | 0 |
| japan | hokkaido prefecture | uncultured atopobium sp. | species | 1 | 0 |
| japan | ibaraki prefecture | atopobium sp. g44 | species | 1 | 0 |
| kenya | | atopobium sp. uba5910 | species | 1 | 0 |
| kenya | | atopobium sp. uba6362 | species | 1 | 0 |
| malaysia | | atopobium sp. uba1382 | species | 1 | 0 |
| namibia | | uncultured atopobium sp. | species | 1 | 0 |
| new zealand | otago | atopobium | genus | 0 | 2 |
| new zealand | otago | atopobium vaginae | species | 0 | 1 |
| nigeria | | uncultured atopobium sp. | species | 1 | 0 |
| singapore | | atopobium | genus | 0 | 1 |
| south africa | | uncultured atopobium sp. | species | 2 | 0 |
| south korea | | atopobium parvulum | species | 4 | 0 |
| south korea | | atopobium rimae | species | 8 | 0 |
| sweden | | atopobium vaginae | species | 84 | 0 |
| sweden | gavleborg | atopobium vaginae | species | 84 | 0 |
| turkey | | atopobium vaginae | species | 2 | 0 |
| united kingdom | | atopobium sp. canine oral taxon 418 | species | 1 | 0 |
| united kingdom | england | atopobium sp. oral taxon 416 | species | 1 | 0 |
| united kingdom | scotland | uncultured atopobium sp. | species | 1 | 0 |
| united states | | atopobium deltae | species | 1 | 0 |
| united states | | atopobium parvulum | species | 1 | 0 |
| united states | | atopobium vaginae | species | 1 | 0 |
| united states | | uncultured atopobium sp. | species | 20 | 0 |
| united states | michigan | atopobium sp. dmct15023 | species | 1 | 0 |
| united states | pennsylvania | atopobium minutum | species | 1 | 0 |
| united states | virginia | atopobium sp. f0209 | species | 1 | 0 |
| united states | wyoming | atopobium sp. uba2729 | species | 1 | 0 |
| united states | wyoming | atopobium sp. uba7261 | species | 1 | 0 |
| united states | wyoming | atopobium sp. uba7291 | species | 1 | 0 |
| united states | wyoming | atopobium sp. uba7740 | species | 1 | 0 |
| united states | wyoming | atopobium sp. uba7741 | species | 1 | 0 |
| united states | wyoming | atopobium sp. uba7748 | species | 1 | 0 |
| united states | wyoming | atopobium sp. uba7756 | species | 1 | 0 |
| united states | wyoming | atopobium sp. uba7774 | species | 1 | 0 |
| united states | wyoming | atopobium sp. uba7788 | species | 1 | 0 |