| afghanistan | | agrobacterium tumefaciens | species | 6 | 0 |
| algeria | | agrobacterium tumefaciens | species | 2 | 0 |
| argentina | | agrobacterium tumefaciens | species | 21 | 0 |
| argentina | santa fe province | agrobacterium tumefaciens | species | 1101 | 0 |
| argentina | tucuman province | agrobacterium tumefaciens | species | 2 | 0 |
| armenia | | agrobacterium tumefaciens | species | 2 | 0 |
| australia | | agrobacterium tumefaciens | species | 37 | 0 |
| australia | new south wales | agrobacterium tumefaciens | species | 1 | 0 |
| australia | victoria | agrobacterium tumefaciens | species | 6 | 0 |
| austria | | agrobacterium tumefaciens | species | 17 | 0 |
| bahamas | | agrobacterium tumefaciens | species | 1 | 0 |
| belarus | minsk city | agrobacterium tumefaciens | species | 4 | 0 |
| belgium | | agrobacterium tumefaciens | species | 16 | 0 |
| bolivia | | agrobacterium tumefaciens | species | 8 | 0 |
| brazil | | agrobacterium tumefaciens | species | 21 | 0 |
| bulgaria | | agrobacterium tumefaciens | species | 4 | 0 |
| canada | | agrobacterium tumefaciens | species | 2 | 0 |
| chile | atacama region | agrobacterium tumefaciens | species | 2 | 0 |
| china | | agrobacterium tumefaciens | species | 245 | 0 |
| china | gansu | agrobacterium tumefaciens | species | 4 | 0 |
| china | guangxi | agrobacterium tumefaciens | species | 3 | 0 |
| china | hainan | agrobacterium tumefaciens | species | 3 | 0 |
| china | heilongjiang | agrobacterium tumefaciens f2 | no rank | 16 | 0 |
| china | henan | agrobacterium tumefaciens | species | 7 | 0 |
| china | hunan | agrobacterium tumefaciens | species | 7 | 0 |
| china | inner mongolia | agrobacterium tumefaciens | species | 770 | 1 |
| china | jiangsu | agrobacterium tumefaciens | species | 4 | 0 |
| china | ningxia | agrobacterium tumefaciens | species | 2 | 0 |
| china | qinghai | agrobacterium tumefaciens | species | 1 | 0 |
| china | shaanxi | agrobacterium tumefaciens | species | 9 | 1 |
| china | shandong | agrobacterium tumefaciens | species | 74 | 1 |
| china | shanxi | agrobacterium tumefaciens gw4 | no rank | 920 | 0 |
| china | sichuan | agrobacterium tumefaciens | species | 1 | 0 |
| china | yunnan | agrobacterium tumefaciens | species | 7 | 1 |
| china | zhejiang | agrobacterium tumefaciens | species | 3 | 0 |
| colombia | | agrobacterium tumefaciens | species | 11 | 0 |
| cuba | | agrobacterium tumefaciens | species | 1 | 0 |
| cuba | havana province | agrobacterium tumefaciens | species | 1 | 0 |
| czech republic | | agrobacterium tumefaciens | species | 1 | 0 |
| denmark | | agrobacterium tumefaciens | species | 1 | 0 |
| dominican republic | | agrobacterium tumefaciens | species | 5 | 0 |
| egypt | | agrobacterium tumefaciens | species | 25 | 0 |
| egypt | beheira governorate | agrobacterium tumefaciens | species | 14 | 0 |
| egypt | beni suef governorate | agrobacterium tumefaciens | species | 25 | 0 |
| egypt | dakahlia governorate | agrobacterium tumefaciens | species | 10 | 0 |
| egypt | damietta governorate | agrobacterium tumefaciens | species | 25 | 0 |
| egypt | faiyum governorate | agrobacterium tumefaciens | species | 15 | 0 |
| egypt | gharbia governorate | agrobacterium tumefaciens | species | 6 | 0 |
| egypt | giza governorate | agrobacterium tumefaciens | species | 5 | 0 |
| egypt | ismailia governorate | agrobacterium tumefaciens | species | 17 | 0 |
| egypt | kafr el sheikh governorate | agrobacterium tumefaciens | species | 22 | 0 |
| egypt | menoufia governorate | agrobacterium tumefaciens | species | 10 | 0 |
| egypt | minya governorate | agrobacterium tumefaciens | species | 2 | 0 |
| egypt | new valley governorate | agrobacterium tumefaciens | species | 5 | 0 |
| egypt | north sinai governorate | agrobacterium tumefaciens | species | 3 | 1 |
| egypt | port said governorate | agrobacterium tumefaciens | species | 1 | 0 |
| egypt | sharqia governorate | agrobacterium tumefaciens | species | 20 | 0 |
| egypt | sohag governorate | agrobacterium tumefaciens | species | 0 | 1 |
| estonia | | agrobacterium tumefaciens | species | 1 | 0 |
| ethiopia | | agrobacterium tumefaciens | species | 18 | 0 |
| france | | agrobacterium tumefaciens | species | 57 | 0 |
| france | aquitaine region | agrobacterium tumefaciens | species | 5 | 0 |
| france | centre region | agrobacterium tumefaciens | species | 257 | 0 |
| france | provence-alpes-cote d'azur region | agrobacterium tumefaciens | species | 27 | 0 |
| france | rhone-alpes region | agrobacterium tumefaciens | species | 88 | 0 |
| germany | | agrobacterium tumefaciens | species | 189 | 0 |
| germany | bavaria | agrobacterium tumefaciens | species | 6 | 0 |
| germany | hesse | agrobacterium tumefaciens | species | 196 | 0 |
| germany | north rhine-westphalia | agrobacterium tumefaciens | species | 3 | 0 |
| germany | saxony | agrobacterium tumefaciens | species | 1 | 0 |
| germany | thuringen | agrobacterium tumefaciens | species | 1 | 0 |
| greece | | agrobacterium tumefaciens | species | 2 | 0 |
| greece | attica region | agrobacterium tumefaciens | species | 1 | 0 |
| hungary | | agrobacterium tumefaciens | species | 1 | 0 |
| hungary | bacs-kiskun county | agrobacterium tumefaciens | species | 1 | 0 |
| hungary | veszprem county | agrobacterium tumefaciens | species | 1 | 0 |
| india | | agrobacterium tumefaciens | species | 67 | 0 |
| india | | agrobacterium tumefaciens str. cherry 2e-2-2 | no rank | 226 | 0 |
| india | andaman and nicobar islands | agrobacterium tumefaciens | species | 1 | 0 |
| india | gujarat | agrobacterium tumefaciens | species | 1 | 0 |
| india | karnataka | agrobacterium tumefaciens | species | 2 | 0 |
| india | kerala | agrobacterium tumefaciens | species | 1 | 0 |
| india | nagaland | agrobacterium tumefaciens | species | 1 | 0 |
| india | national capital territory of delhi | agrobacterium tumefaciens | species | 3 | 1 |
| india | punjab | agrobacterium tumefaciens | species | 1 | 0 |
| india | rajasthan | agrobacterium tumefaciens | species | 0 | 2 |
| india | tamil nadu | agrobacterium tumefaciens | species | 1 | 0 |
| india | uttar pradesh | agrobacterium tumefaciens | species | 11 | 0 |
| indonesia | | agrobacterium tumefaciens | species | 1 | 0 |
| indonesia | bali province | agrobacterium tumefaciens | species | 1 | 0 |
| indonesia | papua province | agrobacterium tumefaciens | species | 6 | 0 |
| indonesia | west java province | agrobacterium tumefaciens | species | 1 | 0 |
| iran | | agrobacterium tumefaciens | species | 118 | 0 |
| iran | hamadan province | agrobacterium tumefaciens | species | 1 | 0 |
| iran | mazandaran province | agrobacterium tumefaciens | species | 1 | 0 |
| iraq | | agrobacterium tumefaciens | species | 2 | 0 |
| israel | | agrobacterium tumefaciens | species | 17 | 0 |
| italy | | agrobacterium tumefaciens | species | 8 | 0 |
| italy | apulia region | agrobacterium tumefaciens | species | 1 | 0 |
| italy | campania region | agrobacterium tumefaciens | species | 2 | 0 |
| italy | sardinia autonomous region | agrobacterium tumefaciens | species | 0 | 1 |
| japan | | agrobacterium tumefaciens | species | 18 | 0 |
| japan | aomori prefecture | agrobacterium tumefaciens | species | 1 | 0 |
| japan | chiba prefecture | agrobacterium tumefaciens | species | 106 | 0 |
| japan | fukuoka prefecture | agrobacterium tumefaciens | species | 1 | 0 |
| japan | miyagi ken prefecture | agrobacterium fabrum str. c58 | no rank | 1 | 0 |
| japan | okayama prefecture | agrobacterium tumefaciens | species | 4 | 0 |
| japan | shizuoka prefecture | agrobacterium tumefaciens | species | 1 | 0 |
| kenya | | agrobacterium tumefaciens | species | 15 | 0 |
| kuwait | | agrobacterium tumefaciens | species | 3 | 0 |
| kyrgyzstan | | agrobacterium tumefaciens | species | 1 | 0 |
| libya | | agrobacterium tumefaciens | species | 1 | 0 |
| mexico | | agrobacterium tumefaciens | species | 24 | 0 |
| mexico | campeche | agrobacterium tumefaciens | species | 1 | 0 |
| mexico | oaxaca | agrobacterium tumefaciens | species | 0 | 2 |
| montenegro | podgorica | agrobacterium tumefaciens | species | 2 | 0 |
| morocco | | agrobacterium tumefaciens | species | 15 | 0 |
| namibia | | agrobacterium tumefaciens | species | 2 | 0 |
| nepal | | agrobacterium tumefaciens | species | 2 | 0 |
| nepal | central development region | agrobacterium tumefaciens | species | 114 | 0 |
| netherlands | | agrobacterium tumefaciens | species | 1 | 0 |
| new zealand | | agrobacterium tumefaciens | species | 69 | 0 |
| nicaragua | | agrobacterium tumefaciens | species | 1 | 0 |
| nigeria | | agrobacterium tumefaciens | species | 1 | 0 |
| pakistan | | agrobacterium tumefaciens | species | 12 | 0 |
| pakistan | punjab province | agrobacterium tumefaciens | species | 1 | 0 |
| peru | san martin region | agrobacterium tumefaciens | species | 2 | 0 |
| philippines | | agrobacterium tumefaciens | species | 1 | 0 |
| poland | | agrobacterium tumefaciens | species | 19 | 0 |
| poland | mazovia province | agrobacterium tumefaciens | species | 3 | 0 |
| portugal | | agrobacterium tumefaciens | species | 3 | 0 |
| qatar | | agrobacterium tumefaciens | species | 1 | 0 |
| reunion | | agrobacterium tumefaciens | species | 0 | 1 |
| russia | | agrobacterium tumefaciens | species | 6 | 0 |
| russia | chelyabinsk oblast | agrobacterium tumefaciens | species | 3 | 0 |
| russia | irkutsk oblast | agrobacterium tumefaciens | species | 2 | 0 |
| russia | krasnodar krai | agrobacterium tumefaciens | species | 19 | 0 |
| russia | moscow city | agrobacterium tumefaciens | species | 1 | 0 |
| russia | novgorod oblast | agrobacterium tumefaciens | species | 3 | 0 |
| russia | rostov oblast | agrobacterium tumefaciens | species | 3 | 0 |
| russia | tula oblast | agrobacterium tumefaciens | species | 3 | 0 |
| russia | ulyanovsk oblast | agrobacterium tumefaciens | species | 23 | 0 |
| saudi arabia | | agrobacterium tumefaciens | species | 1 | 0 |
| senegal | | agrobacterium tumefaciens | species | 1 | 0 |
| serbia | | agrobacterium tumefaciens | species | 1 | 0 |
| singapore | | agrobacterium tumefaciens | species | 23 | 0 |
| slovakia | | agrobacterium tumefaciens | species | 1 | 0 |
| slovenia | city municipality of celje | agrobacterium tumefaciens | species | 1 | 0 |
| slovenia | city municipality of maribor | agrobacterium tumefaciens | species | 4 | 0 |
| slovenia | city municipality of velenje | agrobacterium tumefaciens | species | 12 | 0 |
| slovenia | municipality of brezice | agrobacterium tumefaciens | species | 3 | 0 |
| slovenia | municipality of krsko | agrobacterium tumefaciens | species | 8 | 0 |
| slovenia | municipality of medvode | agrobacterium tumefaciens | species | 3 | 0 |
| slovenia | municipality of naklo | agrobacterium tumefaciens | species | 8 | 0 |
| slovenia | municipality of prebold | agrobacterium tumefaciens | species | 3 | 0 |
| slovenia | municipality of radovljica | agrobacterium tumefaciens | species | 2 | 0 |
| slovenia | municipality of ruse | agrobacterium tumefaciens | species | 1 | 0 |
| slovenia | municipality of selnica ob dravi | agrobacterium tumefaciens | species | 2 | 0 |
| slovenia | municipality of sentjernej | agrobacterium tumefaciens | species | 2 | 0 |
| slovenia | municipality of sentjur | agrobacterium tumefaciens | species | 3 | 0 |
| slovenia | municipality of slovenska bistrica | agrobacterium tumefaciens | species | 1 | 0 |
| slovenia | municipality of slovenske konjice | agrobacterium tumefaciens | species | 4 | 0 |
| slovenia | municipality of vransko | agrobacterium tumefaciens | species | 1 | 0 |
| slovenia | municipality of zalec | agrobacterium tumefaciens | species | 11 | 0 |
| south africa | | agrobacterium tumefaciens | species | 11 | 0 |
| south africa | kwazulu-natal province | agrobacterium tumefaciens | species | 0 | 1 |
| south africa | the western cape province | agrobacterium tumefaciens | species | 1 | 0 |
| south korea | | agrobacterium tumefaciens | species | 4 | 0 |
| south korea | gangwon province | agrobacterium tumefaciens | species | 89 | 0 |
| spain | | agrobacterium tumefaciens | species | 7 | 0 |
| spain | andalusia | agrobacterium tumefaciens | species | 5 | 0 |
| spain | cantabria | agrobacterium tumefaciens | species | 2 | 0 |
| spain | castilla-la mancha | agrobacterium tumefaciens | species | 1 | 0 |
| spain | murcia | agrobacterium tumefaciens | species | 1 | 0 |
| sudan | | agrobacterium tumefaciens | species | 1 | 0 |
| switzerland | | agrobacterium tumefaciens | species | 1 | 0 |
| taiwan | | agrobacterium tumefaciens | species | 6 | 0 |
| tanzania | | agrobacterium tumefaciens | species | 2 | 0 |
| thailand | | agrobacterium tumefaciens | species | 8 | 0 |
| thailand | nakhon pathom province | agrobacterium tumefaciens | species | 1 | 0 |
| tunisia | | agrobacterium tumefaciens | species | 35 | 0 |
| tunisia | bizerte governorate | agrobacterium tumefaciens | species | 1 | 0 |
| tunisia | kairouan governorate | agrobacterium tumefaciens | species | 7 | 0 |
| tunisia | monastir governorate | agrobacterium tumefaciens | species | 1 | 0 |
| tunisia | nabeul governorate | agrobacterium tumefaciens | species | 2 | 0 |
| tunisia | sfax governorate | agrobacterium tumefaciens | species | 2 | 0 |
| turkey | | agrobacterium tumefaciens | species | 2 | 0 |
| turkey | ankara province | agrobacterium tumefaciens | species | 2 | 0 |
| turkey | bursa province | agrobacterium tumefaciens | species | 0 | 1 |
| turkey | sivas province | agrobacterium tumefaciens | species | 2 | 0 |
| ukraine | | agrobacterium tumefaciens | species | 3 | 0 |
| united kingdom | | agrobacterium tumefaciens | species | 9 | 0 |
| united kingdom | wales | agrobacterium tumefaciens | species | 1 | 0 |
| united states | | agrobacterium tumefaciens | species | 89 | 0 |
| united states | california | agrobacterium tumefaciens | species | 422 | 2 |
| united states | florida | agrobacterium tumefaciens | species | 85 | 1 |
| united states | illinois | agrobacterium tumefaciens | species | 156 | 0 |
| united states | iowa | agrobacterium tumefaciens | species | 6 | 0 |
| united states | iowa | agrobacterium tumefaciens str. b6 | no rank | 106 | 0 |
| united states | maryland | agrobacterium tumefaciens | species | 18 | 0 |
| united states | michigan | agrobacterium tumefaciens | species | 298 | 0 |
| united states | missouri | agrobacterium tumefaciens | species | 0 | 1 |
| united states | montana | agrobacterium tumefaciens | species | 1 | 0 |
| united states | new york | agrobacterium fabrum str. c58 | no rank | 7 | 0 |
| united states | new york | agrobacterium tumefaciens | species | 6 | 0 |
| united states | north carolina | agrobacterium tumefaciens | species | 1 | 0 |
| united states | oregon | agrobacterium tumefaciens | species | 67 | 0 |
| united states | south carolina | agrobacterium tumefaciens | species | 1 | 1 |
| united states | south dakota | agrobacterium tumefaciens | species | 36 | 0 |
| united states | washington | agrobacterium tumefaciens | species | 87 | 0 |
| vietnam | | agrobacterium tumefaciens | species | 4 | 0 |