| australia | | gecko hepacivirus | species | 1 | 0 |
| australia | | jogalong virus | species | 1 | 0 |
| australia | | koala hepacivirus | species | 1 | 0 |
| australia | | possum hepacivrus | species | 1 | 0 |
| austria | | equine hepacivirus | species | 30 | 0 |
| austria | | rodent hepacivirus | species | 1 | 0 |
| brazil | | bovine hepacivirus n | species | 1 | 0 |
| brazil | | equine hepacivirus | species | 92 | 0 |
| brazil | | sigmodontinae hepacivirus | species | 1 | 0 |
| bulgaria | | equine hepacivirus | species | 2 | 0 |
| cambodia | | hepacivirus sp. | species | 11 | 0 |
| china | | chinese broad-headed pond turtle hepacivirus | species | 1 | 0 |
| china | | chinese softshell turtle hepacivirus | species | 1 | 0 |
| china | | duck hepacivirus | species | 4 | 0 |
| china | | equine hepacivirus | species | 51 | 0 |
| china | | goat hepacivirus | species | 1 | 0 |
| china | | guangxi chinese leopard gecko hepacivirus | species | 1 | 0 |
| china | | guangxi houndshark hepacivirus | species | 2 | 0 |
| china | | hainan oriental leaf-toed gecko hepacivirus | species | 1 | 0 |
| china | | hepacivirus p | species | 2 | 0 |
| china | | hepacivirus sp. | species | 64 | 0 |
| china | | jingmen rhinolophus sinicus hepacivirus 1 | species | 1 | 0 |
| china | | longquan niviventer fulvescens hepacivirus 1 | species | 1 | 0 |
| china | | longquan niviventer niviventer hepacivirus 1 | species | 1 | 0 |
| china | | longquan rhinolophus sinicus hepacivirus 1 | species | 1 | 0 |
| china | | nanhai dogfish shark hepacivirus | species | 1 | 0 |
| china | | nanhai ghost shark hepacivirus 1 | species | 1 | 0 |
| china | | nanhai ghost shark hepacivirus 2 | species | 1 | 0 |
| china | | rodent hepacivirus | species | 7 | 0 |
| china | | rodent hepacvirus | species | 5 | 0 |
| china | | wenling moray eel hepacivirus | species | 1 | 0 |
| china | | wenling shark virus | species | 2 | 0 |
| china | | wenzhou apodemus agrarius hepacivirus 1 | species | 1 | 0 |
| china | | wenzhou suncus murinus hepacivirus 1 | species | 1 | 0 |
| china | | wufeng niviventer fulvescens hepacivirus 1 | species | 1 | 0 |
| china | | wufeng niviventer niviventer hepacivirus 1 | species | 1 | 0 |
| china | | wufeng rhinolophus sinicus hepacivirus 1 | species | 1 | 0 |
| china | | xiamen guitarfish hepacivirus | species | 1 | 0 |
| china | | xiamen sepia stingray hepacivirus | species | 1 | 0 |
| china | | yili teratoscincus roborowskii hepacivirus | species | 1 | 0 |
| china | guangdong | equine hepacivirus | species | 0 | 1 |
| china | guangxi | bat hepacivirus c1 | species | 1 | 0 |
| china | heilongjiang | equine hepacivirus | species | 0 | 1 |
| costa rica | | hepacivirus sp. | species | 2 | 0 |
| czech republic | | hepacivirus sp. | species | 1 | 0 |
| democratic republic of the congo | | rodent hepacivirus | species | 18 | 0 |
| ethiopia | | rodent hepacivirus | species | 2 | 0 |
| france | | equine hepacivirus | species | 208 | 0 |
| france | | rodent hepacivirus | species | 18 | 0 |
| germany | | equine hepacivirus | species | 20 | 0 |
| germany | | rodent hepacivirus | species | 16 | 0 |
| hong kong | | equine hepacivirus | species | 0 | 1 |
| hungary | | hepacivirus horse/dh1/hun/2013 | species | 1 | 0 |
| italy | | equine hepacivirus | species | 6 | 0 |
| italy | | rodent hepacivirus | species | 3 | 0 |
| italy | apulia region | equine hepacivirus | species | 48 | 0 |
| italy | veneto region | equine hepacivirus | species | 9 | 0 |
| japan | | equine hepacivirus | species | 15 | 0 |
| japan | | equine hepacivirus jpn3/japan/2013 | species | 2 | 0 |
| japan | hokkaido prefecture | equine hepacivirus | species | 15 | 0 |
| kenya | | bat hepacivirus | species | 9 | 0 |
| laos | | hepacivirus sp. | species | 4 | 0 |
| madagascar | | sifaka hepacivirus | species | 9 | 0 |
| mongolia | | equine hepacivirus | species | 5 | 0 |
| morocco | | canine hepacivirus | species | 2 | 0 |
| morocco | | equine hepacivirus | species | 6 | 0 |
| mozambique | | rodent hepacivirus | species | 5 | 0 |
| netherlands | | rodent hepacivirus | species | 21 | 0 |
| nigeria | | western african lungfish hepacivirus | species | 1 | 0 |
| panama | | rodent hepacivirus | species | 1 | 0 |
| slovakia | | rodent hepacivirus | species | 14 | 0 |
| south africa | | equine hepacivirus | species | 51 | 0 |
| south africa | | rodent hepacivirus | species | 9 | 0 |
| south korea | | equine hepacivirus | species | 14 | 0 |
| tanzania | | bat hepacivirus | species | 2 | 0 |
| tanzania | | rodent hepacivirus | species | 32 | 0 |
| thailand | | hepacivirus sp. | species | 13 | 0 |
| united kingdom | scotland | hepacivirus smkl-2012 | species | 6 | 0 |
| united states | | equine hepacivirus | species | 12 | 0 |
| united states | | hepacivirus sp. | species | 1 | 0 |
| united states | | rodent hepacivirus | species | 13 | 0 |
| united states | florida | bald eagle hepacivirus | species | 1 | 0 |
| united states | kansas | bald eagle hepacivirus | species | 1 | 0 |
| united states | minnesota | bald eagle hepacivirus | species | 1 | 0 |
| united states | nebraska | bald eagle hepacivirus | species | 2 | 0 |
| united states | north dakota | bald eagle hepacivirus | species | 1 | 0 |
| united states | texas | bald eagle hepacivirus | species | 2 | 0 |
| united states | washington | bald eagle hepacivirus | species | 3 | 0 |
| united states | wisconsin | bald eagle hepacivirus | species | 5 | 0 |
| vietnam | | rodent hepacivirus | species | 37 | 0 |