| aedes albopictus | Yes | species | eukaryota | invertebrates | species | 7160 | click here |
| aelurostrongylus abstrusus | Yes | species | eukaryota | invertebrates | species | 321389 | click here |
| alphacoronavirus 1 | Yes | species | viruses and viroids | viruses | species | 693997 | click here |
| anaplasma bovis | Yes | species | bacteria | bacteria | species | 186733 | click here |
| ancylostoma tubaeforme | Yes | species | eukaryota | invertebrates | species | 53327 | click here |
| bartonella clarridgeiae | Yes | species | bacteria | bacteria | species | 56426 | click here |
| bartonella henselae | Yes | species | bacteria | bacteria | species | 38323 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| blastocystis sp. subtype 14 | Yes | no rank | | | species | 1202666 | click here |
| bovine spongiform encephalopathy agent | Yes | species | | | species | | click here |
| candidatus mycoplasma haemominutum | Yes | species | bacteria | bacteria | species | 209446 | click here |
| candidatus mycoplasma turicensis | Yes | species | bacteria | bacteria | species | 346879 | click here |
| canine parvovirus | Yes | no rank | viruses and viroids | viruses | no rank | 10788 | click here |
| canine parvovirus 2a | Yes | no rank | viruses and viroids | viruses | no rank | 497961 | click here |
| canine parvovirus 2b | Yes | no rank | viruses and viroids | viruses | no rank | 568986 | click here |
| canine parvovirus 2c | Yes | no rank | viruses and viroids | viruses | no rank | 544789 | click here |
| capillaria aerophila | Yes | species | | | species | 1172388 | click here |
| carnivore protoparvovirus 1 | Yes | species | | | species | 1511906 | click here |
| clonorchis sinensis | Yes | species | eukaryota | invertebrates | species | 79923 | click here |
| cryptosporidium felis | Yes | species | eukaryota | invertebrates | species | 83540 | click here |
| ehrlichia canis | Yes | species | bacteria | bacteria | species | 944 | click here |
| felid herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 10334 | click here |
| feline calicivirus | Yes | species | viruses and viroids | viruses | species | 11978 | click here |
| feline coronavirus | Yes | no rank | viruses and viroids | viruses | no rank | 12663 | click here |
| feline foamy virus | Yes | species | viruses and viroids | viruses | species | 53182 | click here |
| feline immunodeficiency virus | Yes | species | viruses and viroids | viruses | species | 11673 | click here |
| feline leukemia virus | Yes | species | viruses and viroids | viruses | species | 11768 | click here |
| feline panleukopenia virus | Yes | no rank | viruses and viroids | viruses | no rank | 10786 | click here |
| feline parvovirus | Yes | species | viruses and viroids | viruses | species | 10785 | click here |
| felis catus gammaherpesvirus 1 | Yes | species | | | species | 1452540 | click here |
| gnathostoma spinigerum | Yes | species | eukaryota | invertebrates | species | 75299 | click here |
| h5n1 subtype | Yes | no rank | viruses and viroids | viruses | no rank | 102793 | click here |
| hepatozoon canis | Yes | species | eukaryota | invertebrates | species | 110120 | click here |
| hepatozoon felis | Yes | species | eukaryota | invertebrates | species | 294745 | click here |
| hepatozoon sp. ex prionailurus bengalensis | Yes | no rank | eukaryota | invertebrates | species | 681642 | click here |
| hepatozoon sp. ex prionailurus planiceps | Yes | no rank | eukaryota | invertebrates | species | 681641 | click here |
| hydatigera taeniaeformis | Yes | species | eukaryota | invertebrates | species | 6205 | click here |
| infectious bronchitis virus | Yes | no rank | viruses and viroids | viruses | no rank | 11120 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| ixodes nipponensis | Yes | species | eukaryota | invertebrates | species | 63660 | click here |
| mycoplasma haemofelis | Yes | species | bacteria | bacteria | species | 29501 | click here |
| opisthorchis viverrini | Yes | species | eukaryota | invertebrates | species | 6198 | click here |
| paragonimus heterotremus | Yes | species | eukaryota | invertebrates | species | 100268 | click here |
| paragonimus skrjabini | Yes | species | eukaryota | invertebrates | species | 59630 | click here |
| paragonimus westermani | Yes | species | eukaryota | invertebrates | species | 34504 | click here |
| pharyngostomum cordatum | Yes | species | eukaryota | invertebrates | species | 103825 | click here |
| porcine deltacoronavirus | Yes | no rank | | | no rank | 1586324 | click here |
| porcine epidemic diarrhea virus | Yes | species | viruses and viroids | viruses | species | 28295 | click here |
| porcine respiratory coronavirus | Yes | no rank | viruses and viroids | viruses | no rank | 11146 | click here |
| quail coronavirus uae-hku30 | Yes | species | | | species | 2078581 | click here |
| severe acute respiratory syndrome coronavirus 2 | Yes | no rank | | | no rank | 2697049 | click here |
| sparrow coronavirus hku17 | Yes | species | | | species | 1159906 | click here |
| sparrow deltacoronavirus | Yes | species | | | species | 2219863 | click here |
| spirometra erinaceieuropaei | Yes | species | eukaryota | invertebrates | species | 99802 | click here |
| streptobacillus felis | Yes | species | | | species | 1384509 | click here |
| thelazia callipaeda | Yes | species | eukaryota | invertebrates | species | 103827 | click here |
| toxascaris leonina | Yes | species | eukaryota | invertebrates | species | 59264 | click here |
| toxocara cati | Yes | species | eukaryota | invertebrates | species | 6266 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| trichinella nativa | Yes | species | eukaryota | invertebrates | species | 6335 | click here |
| trichinella pseudospiralis | Yes | species | eukaryota | invertebrates | species | 6337 | click here |
| troglostrongylus brevior | Yes | species | | | species | 1232735 | click here |
| uncultured anaplasma sp. | Yes | no rank | bacteria | environmental samples | species | 319051 | click here |
| uncultured helicobacter sp. | Yes | no rank | bacteria | environmental samples | species | 175537 | click here |
| uncultured mycoplasma sp. | Yes | no rank | bacteria | environmental samples | species | 167967 | click here |