| alphapapillomavirus 12 | No | species | viruses and viroids | viruses | species | 10570 | click here |
| anopheles coluzzii | No | species | | | species | 1518534 | click here |
| anopheles gambiae | No | species | eukaryota | invertebrates | species | 7165 | click here |
| babesia sp. kmg-2009a | No | no rank | eukaryota | invertebrates | species | 635000 | click here |
| baboon enterovirus | No | no rank | viruses and viroids | viruses | no rank | 172022 | click here |
| baboon gamma-herpesvirus | No | no rank | viruses and viroids | viruses | no rank | 169974 | click here |
| baboon orthoreovirus | No | species | viruses and viroids | viruses | species | 75888 | click here |
| bifidobacterium pseudocatenulatum | No | species | bacteria | bacteria | species | 28026 | click here |
| bifidobacterium sp. | No | no rank | bacteria | bacteria | species | 41200 | click here |
| blastocystis sp. | No | species | eukaryota | plants | species | 46767 | click here |
| blastocystis sp. subtype 1 | No | no rank | eukaryota | plants | species | 944036 | click here |
| blastocystis sp. subtype 3 | No | no rank | eukaryota | plants | species | 944168 | click here |
| buxtonella-like sp. bc13 | No | no rank | | | species | 1144362 | click here |
| buxtonella-like sp. bc132 | No | no rank | | | species | 1144363 | click here |
| buxtonella-like sp. bc160 | No | no rank | | | species | 1144364 | click here |
| buxtonella-like sp. bc184 | No | no rank | | | species | 1144367 | click here |
| buxtonella-like sp. bc2 | No | no rank | | | species | 1144369 | click here |
| buxtonella-like sp. bc4 | No | no rank | | | species | 1144370 | click here |
| buxtonella-like sp. bc5 | No | no rank | | | species | 1144371 | click here |
| candida albicans | No | species | eukaryota | plants | species | 5476 | click here |
| chikungunya virus | No | species | viruses and viroids | viruses | species | 37124 | click here |
| chilomastix mesnili | No | species | eukaryota | invertebrates | species | 472572 | click here |
| clostridium perfringens | No | species | bacteria | bacteria | species | 1502 | click here |
| cryptosporidium muris | No | species | eukaryota | invertebrates | species | 5808 | click here |
| cryptosporidium parvum | No | species | eukaryota | invertebrates | species | 5807 | click here |
| ebola virus | No | subspecies | viruses and viroids | viruses | no rank | 1570291 | click here |
| encephalomyocarditis virus | No | no rank | viruses and viroids | viruses | no rank | 12104 | click here |
| entamoeba coli | No | species | eukaryota | invertebrates | species | 110766 | click here |
| entamoeba histolytica | No | species | eukaryota | invertebrates | species | 5759 | click here |
| enterobius vermicularis | No | species | eukaryota | invertebrates | species | 51028 | click here |
| enterocytozoon bieneusi | No | species | eukaryota | plants | species | 31281 | click here |
| escherichia coli | No | species | bacteria | bacteria | species | 562 | click here |
| giardia intestinalis | No | species | eukaryota | invertebrates | species | 5741 | click here |
| hamadryas baboon polyomavirus | No | species | viruses and viroids | viruses | species | 887571 | click here |
| hepatovirus a | No | species | viruses and viroids | viruses | species | 12092 | click here |
| herpesvirales sp. | Yes | species | | | species | 1927716 | click here |
| human hepatitis a virus | No | no rank | viruses and viroids | viruses | no rank | 208726 | click here |
| human herpesvirus 4 | No | species | viruses and viroids | viruses | species | 10376 | click here |
| hymenolepis nana | No | species | eukaryota | invertebrates | species | 102285 | click here |
| lassa mammarenavirus | No | species | viruses and viroids | viruses | species | 11620 | click here |
| macaca mulatta polyomavirus 1 | No | species | | | species | 1891767 | click here |
| macacine herpesvirus 1 | No | species | viruses and viroids | viruses | species | 10325 | click here |
| mengo virus | No | no rank | viruses and viroids | viruses | no rank | 12107 | click here |
| middle east respiratory syndrome coronavirus | No | species | viruses and viroids | viruses | species | 1335626 | click here |
| mumps orthorubulavirus | No | species | | | species | 2560602 | click here |
| mycobacterium bovis | No | species | bacteria | bacteria | species | 1765 | click here |
| neobalantidium coli | No | species | eukaryota | invertebrates | species | 71585 | click here |
| papiine herpesvirus 1 | No | species | viruses and viroids | viruses | species | 106332 | click here |
| papiine herpesvirus 2 | No | species | viruses and viroids | viruses | species | 340907 | click here |
| papio hamadryas adenovirus | No | species | | | species | 1916700 | click here |
| papio hamadryas adenovirus 1 | No | species | | | species | 1076323 | click here |
| papio hamadryas lymphocryptovirus | No | species | | | species | 1676472 | click here |
| papio hamadryas lymphocryptovirus 2 | Yes | species | viruses and viroids | viruses | species | 212730 | click here |
| papio hamadryas papillomavirus type 1 | No | species | | | species | 990303 | click here |
| pedicinus hamadryas | No | species | eukaryota | invertebrates | species | 294759 | click here |
| primate astrovirus | No | species | | | species | 1736109 | click here |
| primate t-lymphotropic virus 1 | No | species | viruses and viroids | viruses | species | 194440 | click here |
| primate t-lymphotropic virus 3 | No | species | viruses and viroids | viruses | species | 194443 | click here |
| schistosoma mansoni | No | species | eukaryota | invertebrates | species | 6183 | click here |
| schistosoma mattheei | No | species | eukaryota | invertebrates | species | 31246 | click here |
| severe acute respiratory syndrome coronavirus 2 | No | no rank | | | no rank | 2697049 | click here |
| simian foamy virus | No | species | viruses and viroids | viruses | species | 11642 | click here |
| simian immunodeficiency virus | No | species | viruses and viroids | viruses | species | 11723 | click here |
| simian t-lymphotropic retrovirus type 1f | No | no rank | viruses and viroids | viruses | no rank | 36369 | click here |
| simian t-lymphotropic virus 1 | No | no rank | viruses and viroids | viruses | no rank | 33747 | click here |
| simian t-lymphotropic virus 3 | No | no rank | viruses and viroids | viruses | no rank | 39101 | click here |
| staphylococcus aureus | No | species | bacteria | bacteria | species | 1280 | click here |
| streptococcus pyogenes | No | species | bacteria | bacteria | species | 1314 | click here |
| strongyloides sp. ta-2010 | No | no rank | eukaryota | invertebrates | species | 909419 | click here |
| treponema pallidum | No | species | bacteria | bacteria | species | 160 | click here |
| trichuris sp. b24_dk | No | no rank | | | species | 1394890 | click here |
| trichuris sp. b42_dk | No | no rank | | | species | 1394891 | click here |
| trichuris sp. b47_dk | No | no rank | | | species | 1394892 | click here |
| trichuris sp. b48_dk | No | no rank | | | species | 1394893 | click here |
| trichuris sp. b55_dk | No | no rank | | | species | 1394894 | click here |
| trichuris sp. b57_dk | No | no rank | | | species | 1394895 | click here |
| trichuris sp. b63_dk | No | no rank | | | species | 1394896 | click here |
| trichuris sp. ttb1 | No | no rank | | | species | 1719121 | click here |
| trichuris trichiura | No | species | eukaryota | invertebrates | species | 36087 | click here |
| trypanosoma cruzi | No | species | eukaryota | invertebrates | species | 5693 | click here |
| uncultured bacterium | No | no rank | bacteria | environmental samples | species | 77133 | click here |
| uncultured treponema sp. | No | no rank | bacteria | environmental samples | species | 162155 | click here |
| west nile virus | No | species | viruses and viroids | viruses | species | 11082 | click here |