Index

Country Organism Interactions

We distinguish between carrier and cargo organisms. Carriers correspond to vectors or hosts whereas cargos correspond to potential pathogen, parasite, commensal etc. This page shows the interactions between carriers and cargos and in which country and sub country level the interactions were found, based on "potential" evidence from the nucleotide database and/or pubmed.

Carrier Filter	Carrier TaxId Filter	Carrier Rank Filter	Carrier Taxa Filter	Cargo Filter	Cargo TaxId Filter	Cargo Rank Filter	Cargo Taxa Filter	Country Filter	Administrative Div(sorted ascending) Filter	Sequences Filter	PubMed Filter

pseudotsuga menziesii	3357	species	plants	phytophthora pseudotsugae	53987	species	plants	united states	oregon	2	0 Latest Pubmed Search
pseudotsuga menziesii	3357	species	plants	fusarium commune	249398	species	plants	united states	oregon	1	0 Latest Pubmed Search
pseudotsuga menziesii	3357	species	plants	phaeocryptopus gaeumannii	64360	species	plants	united states	oregon	2	0 Latest Pubmed Search
dermacentor variabilis	34621	species	invertebrates	anaplasma marginale	770	species	bacteria	united states	oregon	0	1 Latest Pubmed Search
alnus rubra	109069	species	plants	cryptosporella alni-rubrae	859428	species	plants	united states	oregon	6	0 Latest Pubmed Search
rubus ursinus	75100	species	plants	agrobacterium tumefaciens	358	species	bacteria	united states	oregon	1	0 Latest Pubmed Search
homo sapiens	9606	species	primates	mycobacterium avium	1764	species	bacteria	united states	oregon	0	1 Latest Pubmed Search
homo sapiens	9606	species	primates	influenza a virus (a/oregon/ur06-0272/2007(h3n2))	456235	no rank	viruses	united states	oregon	8	0 Latest Pubmed Search
homo sapiens	9606	species	primates	mycobacterium avium complex	37162	subspecies	bacteria	united states	oregon	0	1 Latest Pubmed Search
homo sapiens	9606	species	primates	cryptococcus neoformans	5207	species	plants	united states	oregon	0	1 Latest Pubmed Search
homo sapiens	9606	species	primates	human immunodeficiency virus 2	11709	species	viruses	united states	oregon	0	2 Latest Pubmed Search
homo sapiens	9606	species	primates	influenza b virus	11520	species	viruses	united states	oregon	0	1 Latest Pubmed Search
homo sapiens	9606	species	primates	influenza a virus (a/oregon/ur06-0230/2007(h1n1))	456105	no rank	viruses	united states	oregon	8	0 Latest Pubmed Search
homo sapiens	9606	species	primates	salmonella enterica	28901	species	bacteria	united states	oregon	0	1 Latest Pubmed Search
homo sapiens	9606	species	primates	influenza a virus (a/oregon/ur06-0289/2007(h3n2))	456222	no rank	viruses	united states	oregon	8	0 Latest Pubmed Search
homo sapiens	9606	species	primates	influenza a virus (a/oregon/ur06-0186/2007(h1n1))	456033	no rank	viruses	united states	oregon	8	0 Latest Pubmed Search
homo sapiens	9606	species	primates	human immunodeficiency virus	12721	species	viruses	united states	oregon	0	6 Latest Pubmed Search
homo sapiens	9606	species	primates	rabies virus	11292	species	viruses	united states	oregon	0	1 Latest Pubmed Search
homo sapiens	9606	species	primates	influenza a virus (a/oregon/ur06-0231/2007(h1n1))	456024	no rank	viruses	united states	oregon	8	0 Latest Pubmed Search
homo sapiens	9606	species	primates	influenza a virus (a/oregon/ur06-0221/2007(h3n2))	456232	no rank	viruses	united states	oregon	8	0 Latest Pubmed Search
homo sapiens	9606	species	primates	influenza a virus (a/oregon/ur06-0179/2007(h1n1))	456076	no rank	viruses	united states	oregon	8	0 Latest Pubmed Search
abies	3319	genus	plants	phytophthora cambivora	53983	species	plants	united states	oregon	2	0 Latest Pubmed Search
viburnum plicatum	179996	species	plants	phytophthora ramorum	164328	species	plants	united states	oregon	1	0 Latest Pubmed Search
umbellularia californica	3438	species	plants	phytophthora siskiyouensis	436079	species	plants	united states	oregon	2	0 Latest Pubmed Search
begonia	3681	genus	plants	bemisia tabaci	7038	species	invertebrates	united states	oregon	1	0 Latest Pubmed Search
pterospora	340199	no rank	invertebrates	rhizopogon sp. siskiyou	181379	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
pterospora	4348	genus	plants	rhizopogon sp. siskiyou	181379	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
dendroctonus pseudotsugae	77167	species	invertebrates	kuraishia sp. gobappsmp408	420073	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
dendroctonus pseudotsugae	77167	species	invertebrates	yamadazyma scolyti	45511	species	plants	united states	oregon	5	0 Latest Pubmed Search
dendroctonus pseudotsugae	77167	species	invertebrates	nakazawaea ernobii	1538178	species	plants	united states	oregon	24	0 Latest Pubmed Search
dendroctonus pseudotsugae	77167	species	invertebrates	kuraishia capsulata	317047	species	plants	united states	oregon	1	0 Latest Pubmed Search
dendroctonus pseudotsugae	77167	species	invertebrates	pichia sp. goemilpsp380	420051	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
dendroctonus pseudotsugae	77167	species	invertebrates	ogataea glucozyma	36023	species	plants	united states	oregon	1	0 Latest Pubmed Search
cercopithecidae	9527	family	primates	monkeypox virus	10244	species	viruses	united states	oregon	0	1 Latest Pubmed Search
oryctolagus cuniculus	9986	species	mammals	rabbit vesivirus	303317	species	viruses	united states	oregon	2	0 Latest Pubmed Search
stellantchasmus falcatus	104478	species	invertebrates	neorickettsia sp. sf agent	172996	no rank	bacteria	united states	oregon	1	0 Latest Pubmed Search
ilex aquifolium	4298	species	plants	phytophthora ilicis	89335	species	plants	united states	oregon	4	0 Latest Pubmed Search
pinus monticola	3345	species	plants	lophodermium sp. c4	259237	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
pinus monticola	3345	species	plants	beauveria sp. or2s2	259201	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
pinus attenuata	71624	species	plants	rhizosphaera pini	64367	species	plants	united states	oregon	2	0 Latest Pubmed Search
pinus monticola	3345	species	plants	lophodermium sp. c3	259238	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
pinus monticola	3345	species	plants	lophodermium sp. c1	259239	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
pinus ponderosa	55062	species	plants	wilcoxina sp. r3193	432193	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
pinus ponderosa	55062	species	plants	rhizopogon sp. r3206	432191	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
pinus ponderosa	55062	species	plants	rhizopogon aff. salebrosus r3188	432189	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
pinus ponderosa	55062	species	plants	rhizopogon sp. r3184	432192	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
pinus ponderosa	55062	species	plants	suillaceae sp. r3190	432196	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
oncorhynchus clarkii	30962	species	vertebrates	mycobacterium salmoniphilum	404941	species	bacteria	united states	oregon	2	0 Latest Pubmed Search
oncorhynchus clarkii	30962	species	vertebrates	flavobacterium psychrophilum	96345	species	bacteria	united states	oregon	11	0 Latest Pubmed Search
pinus ponderosa	55062	species	plants	dothistroma septosporum	64363	species	plants	united states	oregon	4	0 Latest Pubmed Search
pinus ponderosa	55062	species	plants	lactarius sp. r3200	432190	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
ixodes pacificus	29930	species	invertebrates	borreliella burgdorferi	139	species	bacteria	united states	oregon	0	5 Latest Pubmed Search
dendroctonus valens	77173	species	invertebrates	meyerozyma guilliermondii	4929	species	plants	united states	oregon	2	0 Latest Pubmed Search
acer macrophyllum	66211	species	plants	diaporthales sp. mosid13	327285	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
acer macrophyllum	66211	species	plants	sawadaea sp. mosid21	327293	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
acer macrophyllum	66211	species	plants	sawadaea sp. mosid17	327289	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
dermacentor andersoni	34620	species	invertebrates	anaplasma marginale	770	species	bacteria	united states	oregon	0	4 Latest Pubmed Search
dermacentor andersoni	34620	species	invertebrates	rickettsia endosymbiont of dermacentor andersoni	255909	no rank	bacteria	united states	oregon	1	0 Latest Pubmed Search
dermacentor andersoni	34620	species	invertebrates	francisella endosymbiont of dermacentor andersoni	255914	no rank	bacteria	united states	oregon	2	0 Latest Pubmed Search
rubus pedatus	75082	species	plants	gnomoniopsis alderdunensis	926276	species	plants	united states	oregon	2	0 Latest Pubmed Search
rubus pedatus	75082	species	plants	gnomoniopsis idaeicola	925762	species	plants	united states	oregon	3	0 Latest Pubmed Search
danio rerio	7955	species	vertebrates	mycobacterium sp. jan2	405004	no rank	bacteria	united states	oregon	1	0 Latest Pubmed Search
danio rerio	7955	species	vertebrates	mycobacterium chelonae	1774	species	bacteria	united states	oregon	2	0 Latest Pubmed Search
populus trichocarpa	3694	species	plants	sphaerulina populicola	215467	species	plants	united states	oregon	1	0 Latest Pubmed Search
quercus garryana	168162	species	plants	uncultured trichophaea	565222	no rank	environmental samples	united states	oregon	1	0 Latest Pubmed Search
quercus garryana	168162	species	plants	uncultured scleroderma	613081	no rank	environmental samples	united states	oregon	1	0 Latest Pubmed Search
quercus garryana	168162	species	plants	uncultured hebeloma	210223	no rank	environmental samples	united states	oregon	1	0 Latest Pubmed Search
quercus garryana	168162	species	plants	uncultured tuber	210224	no rank	environmental samples	united states	oregon	4	0 Latest Pubmed Search
quercus garryana	168162	species	plants	uncultured geopora	522716	no rank	environmental samples	united states	oregon	1	0 Latest Pubmed Search
quercus garryana	168162	species	plants	uncultured cazia	504453	no rank	environmental samples	united states	oregon	1	0 Latest Pubmed Search
quercus garryana	168162	species	plants	uncultured astraeus	504452	no rank	environmental samples	united states	oregon	1	0 Latest Pubmed Search
quercus garryana	168162	species	plants	uncultured tomentella	246176	no rank	environmental samples	united states	oregon	3	0 Latest Pubmed Search
quercus garryana	168162	species	plants	uncultured tarzetta	503391	no rank	environmental samples	united states	oregon	1	0 Latest Pubmed Search
quercus garryana	168162	species	plants	leptogium saturninum	243206	species	plants	united states	oregon	1	0 Latest Pubmed Search
canis lupus familiaris	9615	subspecies	mammals	ehrlichia canis	944	species	bacteria	united states	oregon	0	1 Latest Pubmed Search
canis lupus familiaris	9615	subspecies	mammals	borreliella burgdorferi	139	species	bacteria	united states	oregon	0	1 Latest Pubmed Search
canis lupus familiaris	9615	subspecies	mammals	west nile virus	11082	species	viruses	united states	oregon	0	1 Latest Pubmed Search
rubus parviflorus	59496	species	plants	gnomoniopsis alderdunensis	926276	species	plants	united states	oregon	2	0 Latest Pubmed Search
rubus parviflorus	59496	species	plants	gnomoniopsis sanguisorbae	925764	species	plants	united states	oregon	1	0 Latest Pubmed Search
canis lupus familiaris	9615	subspecies	mammals	dirofilaria immitis	6287	species	invertebrates	united states	oregon	0	1 Latest Pubmed Search
canis lupus familiaris	9615	subspecies	mammals	mesocestoides sp. c kp-2005	337326	no rank	invertebrates	united states	oregon	2	0 Latest Pubmed Search
steinernema oregonense	52068	species	invertebrates	xenorhabdus bovienii	40576	species	bacteria	united states	oregon	3	0 Latest Pubmed Search
odocoileus hemionus columbianus	9873	subspecies	mammals	parelaphostrongylus odocoilei	192633	species	invertebrates	united states	oregon	0	1 Latest Pubmed Search
canis lupus familiaris	9615	subspecies	mammals	anaplasma phagocytophilum	948	species	bacteria	united states	oregon	0	1 Latest Pubmed Search
odocoileus virginianus	9874	species	mammals	parelaphostrongylus andersoni	192632	species	invertebrates	united states	oregon	0	1 Latest Pubmed Search
anas carolinensis	75836	species	vertebrates	influenza a virus (a/american green-winged teal/oregon/44336-183/2007(h3n8))	908668	no rank	viruses	united states	oregon	8	0 Latest Pubmed Search
anas carolinensis	75836	species	vertebrates	influenza a virus (a/american green-winged teal/oregon/44336-124/2007(h3n8))	908667	no rank	viruses	united states	oregon	4	0 Latest Pubmed Search
ceanothus velutinus	54785	species	plants	frankia sp. frcvel-iz	85751	no rank	bacteria	united states	oregon	1	0 Latest Pubmed Search
ceanothus velutinus	54785	species	plants	frankia sp. frcvel-20	85750	no rank	bacteria	united states	oregon	1	0 Latest Pubmed Search
ceanothus velutinus	54785	species	plants	frankia sp. frcvel-ga	85749	no rank	bacteria	united states	oregon	1	0 Latest Pubmed Search
chloropidae	29032	family	invertebrates	wolbachia endosymbiont of chloropidae sp. jks-351	486915	species	bacteria	united states	oregon	6	0 Latest Pubmed Search
vaccinium corymbosum	69266	species	plants	seimatosporium lichenicola	152302	species	plants	united states	oregon	1	0 Latest Pubmed Search
vaccinium corymbosum	69266	species	plants	phomopsis sp. fau 453	159545	no rank	plants	united states	oregon	1	0 Latest Pubmed Search
gallus gallus	9031	species	vertebrates	mycoplasma gallisepticum	2096	species	bacteria	united states	oregon	0	1 Latest Pubmed Search
gallus gallus	9031	species	vertebrates	escherichia coli	562	species	bacteria	united states	oregon	0	1 Latest Pubmed Search
gallus gallus	9031	species	vertebrates	enterococcus faecium	1352	species	bacteria	united states	oregon	0	1 Latest Pubmed Search
cervus elaphus	9860	species	mammals	mycobacterium avium subsp. paratuberculosis	1770	subspecies	bacteria	united states	oregon	0	1 Latest Pubmed Search
cervus elaphus	9860	species	mammals	parelaphostrongylus tenuis	148309	species	invertebrates	united states	oregon	0	1 Latest Pubmed Search
solanum tuberosum	4113	species	plants	phytophthora infestans	4787	species	plants	united states	oregon	4	0 Latest Pubmed Search
anas acuta	28680	species	vertebrates	influenza a virus (a/northern pintail/oregon/44249-559/2006(h3n8))	768430	no rank	viruses	united states	oregon	8	0 Latest Pubmed Search