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human anthrax in turkey from 1990 to 2007.anthrax is an endemic disease in turkey, among other countries of the world. the potential of bacillus anthracis as a bioterrorism agent makes anthrax an important global issue. the aim of the present study was to review human anthrax in turkey during the last decade. human anthrax cases recorded from 1990 to 2005 were obtained from the website of the turkish ministry of health, and those recorded between 1995 and 2005 were plotted on a map of turkey. papers on anthrax published from turkey betw ...200918945187
inactivation of rho gtpases by statins attenuates anthrax lethal toxin activity.anthrax lethal factor (lf), secreted by bacillus anthracis, interacts with protective antigen to form a bipartite toxin (lethal toxin [lt]) that exerts pleiotropic biological effects resulting in subversion of the innate immune response. although the mitogen-activated protein kinase kinases (mkks) are the major intracellular protein targets of lf, the pathology induced by lt is not well understood. the statin family of hmg-coenzyme a reductase inhibitors have potent anti-inflammatory effects ind ...200918936176
the cytoplasmic domain of anthrax toxin receptor 1 affects binding of the protective antigen.the protective antigen (pa) component of anthrax toxin binds the i domain of the receptor antxr1. integrin i domains convert between open and closed conformations that bind ligand with high and low affinities, respectively; this process is regulated by signaling from the cytoplasmic domains. to assess whether intracellular signals might influence the interaction between antxr1 and pa, we compared two splice variants of antxr1 that differ only in their cytoplasmic domains. we found that cells exp ...200918936178
the mechanism of bacillus anthracis intracellular germination requires multiple and highly diverse genetic loci.in an effort to better understand the mechanisms by which bacillus anthracis establishes disease, experiments were undertaken to identify the genes essential for intracellular germination. eighteen diverse genetic loci were identified via an enrichment protocol using a transposon-mutated library of b. anthracis spores, which was screened for mutants delayed in intracellular germination. fourteen transposon mutants were identified in genes not previously associated with b. anthracis germination a ...200918936179
immune defence, parasite evasion strategies and their relevance for 'macroscopic phenomena' such as virulence.the discussion of host-parasite interactions, and of parasite virulence more specifically, has so far, with a few exceptions, not focused much attention on the accumulating evidence that immune evasion by parasites is not only almost universal but also often linked to pathogenesis, i.e. the appearance of virulence. now, the immune evasion hypothesis offers a deeper insight into the evolution of virulence than previous hypotheses. sensitivity analysis for parasite fitness and life-history theory ...200918930879
an essential dnab helicase of bacillus anthracis: identification, characterization, and mechanism of action.we have described a novel essential replicative dna helicase from bacillus anthracis, the identification of its gene, and the elucidation of its enzymatic characteristics. anthrax dnab helicase (dnab(ba)) is a 453-amino-acid, 50-kda polypeptide with atpase and dna helicase activities. dnab(ba) displayed distinct enzymatic and kinetic properties. dnab(ba) has low single-stranded dna (ssdna)-dependent atpase activity but possesses a strong 5'-->3' dna helicase activity. the stimulation of atpase a ...200918931108
a unique gtp-dependent sporulation sensor histidine kinase in bacillus anthracis.the bacillus anthracis ba2291 gene codes for a sensor histidine kinase involved in the induction of sporulation. genes for orthologs of the sensor domain of the ba2291 kinase exist in virulence plasmids in this organism, and these proteins, when expressed, inhibit sporulation by converting ba2291 to an apparent phosphatase of the sporulation phosphorelay. evidence suggests that the sensor domains inhibit ba2291 by titrating its activating signal ligand. studies with purified ba2291 revealed that ...200918931112
computational insights into the interaction of the anthrax lethal factor with the n-terminal region of its substrates.the anthrax lethal factor is a zinc metalloprotease toxin secreted by bacillus anthracis which cleaves at the n-terminal region of six mitogen activated protein kinase kinases (meks) in the cell. additionally, it is known to cleave a nine residue peptide "lf10," 50-fold more efficiently than nine residues of mek1. there is very little sequence similarity between the mek n-termini, thus, it is unclear how the lethal factor can accommodate and cleave the diverse n-termini of the meks and whether t ...200918831046
artificial plasmid engineered to simulate multiple biological threat agents.the objective of this study was to develop a non-virulent simulant to replace several virulent organisms during the development of detection and identification methods for biological threat agents. we identified and selected specific genes to detect yersinia pestis, francisella tularensis, burkholderia mallei, burkholderia pseudomallei, rickettsia sp., coxiella burnetii, brucella sp., enterohemorrhagic escherichia coli o157:h7, bacillus anthracis, and variola (smallpox) virus. we then designed a ...200918923830
pulmonary deposition of aerosolized bacillus atrophaeus in a swine model due to exposure from a simulated anthrax letter incident.dry anthrax spore powder is readily disseminated as an aerosol and it is possible that passive dispersion when opening a letter containing anthrax spores may result in lethal doses to humans. the specific aim of this study was to quantify the respirable aerosol hazard associated with opening an envelope/letter contaminated with a dry spore powder of the biological pathogen anthrax in a typical office environment. an envelope containing a letter contaminated with 1.0 g of dry bacillus atrophaeus ...200918923948
functional expression of bacillus anthracis protective antigen in e. coli.the protective antigen (pa) of bacillus anthracis is a potent immunogen and an important candidate vaccine. in addition, it is used in monitoring systems like enzyme-linked immunosorbent assay to assess antibodies against pa in immunized subjects. the low level of pa production in b. anthracis and the difficulty of separating it from other bacterial components have made the researchers do different studies with the aim of producing recombinant pa (rpa). in this study, to produce rpa as a recombi ...200918654743
non-canonical effects of anthrax toxins on haematopoiesis: implications for vaccine development.anthrax receptor (atr) shares similarities with molecules relevant to haematopoiesis. this suggests that anthrax proteins might bind to these mimicking molecules and exert non-specific haematopoietic effects. the haematopoietic system is the site of immune cell development in the adult. as such, atr ligand, protective antigen (pa) and the other anthrax proteins, lethal factor, edema factor, could be significant to haematopoietic responses against bacillus anthracis infection. because haematopoie ...200918752638
structural studies of shikimate dehydrogenase from bacillus anthracis complexed with cofactor nadp.bacillus anthracis has been employed as an agent of bioterrorism, with high mortality, despite anti-microbial treatment, which strongly indicates the need of new drugs to treat anthrax. shikimate pathway is a seven step biosynthetic route which generates chorismic acid from phosphoenol pyruvate and erythrose-4-phosphate. chorismic acid is the major branch point in the synthesis of aromatic amino acids, ubiquinone, and secondary metabolites. the shikimate pathway is essential for many pathologica ...200919043750
label-free dual sensing of dna molecules using gan nanowires.we demonstrate a rationale for using gan nanowires (gannws) in label-free dna-sensing using dual routes of electrochemical impedance spectroscopy (eis) and photoluminescence (pl) measurements, employing a popular target dna with anthrax lethal factor (lf) sequence. the in situ eis reveals that both high surface area and surface band-bending in the nanowires, providing more binding sites and surface-enhanced charge transfer, respectively, are responsible for the enhanced sensitivity to surface-im ...200919046071
capsule anchoring in bacillus anthracis occurs by a transpeptidation reaction that is inhibited by capsidin.bacillus anthracis, the causative agent of anthrax, is a dangerous biological weapon, as spores derived from drug-resistant strains cause infections for which antibiotic therapy is no longer effective. we sought to develop an anti-infective therapy for anthrax and targeted capd, an enzyme that cleaves poly-gamma-d-glutamate capsule and generates amide bonds with peptidoglycan cross-bridges to deposit capsular material into the envelope of b. anthracis. in agreement with the model that capsule co ...200919017271
a simple method for the rapid removal of bacillus anthracis spores from dna preparations.this study establishes a filtration method for the safe removal of bacillus anthracis spores which may contaminate dna preparations. centrifugal filtration with 0.1-microm filter units can be used following extraction of dna from b. anthracis spores to render samples safe without compromising the sensitivity of diagnostic real-time pcr assays for b. anthracis.200918996156
surface sampling of spores in dry-deposition aerosols.the ability to reliably and reproducibly sample surfaces contaminated with a biological agent is a critical step in measuring the extent of contamination and determining if decontamination steps have been successful. the recovery operations following the 2001 attacks with bacillus anthracis spores were complicated by the fact that no standard sample collection format or decontamination procedures were established. recovery efficiencies traditionally have been calculated based upon biological age ...200918997021
inhibition of methionyl-trna synthetase by rep8839 and effects of resistance mutations on enzyme activity.rep8839 is a selective inhibitor of methionyl-trna synthetase (metrs) with antibacterial activity against a variety of gram-positive organisms. we determined rep8839 potency against staphylococcus aureus metrs and assessed its selectivity for bacterial versus human orthologs of metrs. the inhibition constant (k(i)) of rep8839 was 10 pm for staphylococcus aureus metrs. inhibition of metrs by rep8839 was competitive with methionine and uncompetitive with atp. thus, high physiological atp levels wo ...200919015366
kinetic and x-ray structural evidence for negative cooperativity in substrate binding to nicotinate mononucleotide adenylyltransferase (nmat) from bacillus anthracis.biosynthesis of nad(p) in bacteria occurs either de novo or through one of the salvage pathways that converge at the point where the reaction of nicotinate mononucleotide (namn) with atp is coupled to the formation of nicotinate adenine dinucleotide (naad) and inorganic pyrophosphate. this reaction is catalyzed by nicotinate mononucleotide adenylyltransferase (nmat), which is essential for bacterial growth, making it an attractive drug target for the development of new antibiotics. steady-state ...200918977360
modeling the activity of furin inhibitors using artificial neural network.quantitative structure-activity relationship (qsar) models were constructed for predicting the inhibition of furin-dependent processing of anthrax protective antigen of substituted guanidinylated aryl 2,5-dideoxystreptamines. molecular descriptors calculated by e-dragon and recon were subjected to variable reduction using the unsupervised forward selection (ufs) algorithm. the variables were then used as input for qsar model generation using partial least squares and back-propagation neural netw ...200918977558
trends in prokaryotic evolution revealed by comparison of closely related bacterial and archaeal genomes.in order to explore microevolutionary trends in bacteria and archaea, we constructed a data set of 41 alignable tight genome clusters (atgcs). we show that the ratio of the medians of nonsynonymous to synonymous substitution rates (dn/ds) that is used as a measure of the purifying selection pressure on protein sequences is a stable characteristic of the atgcs. in agreement with previous findings, parasitic bacteria, notwithstanding the sometimes dramatic genome shrinkage caused by gene loss, are ...200918978059
discriminating virulence mechanisms among bacillus anthracis strains by using a murine subcutaneous infection model.bacillus anthracis strains harboring virulence plasmid pxo1 that encodes the toxin protein protective antigen (pa), lethal factor, and edema factor and virulence plasmid pxo2 that encodes capsule biosynthetic enzymes exhibit different levels of virulence in certain animal models. in the murine model of pulmonary infection, b. anthracis virulence was capsule dependent but toxin independent. we examined the role of toxins in subcutaneous (s.c.) infections using two different genetically complete ( ...200918981254
sequential b-cell epitopes of bacillus anthracis lethal factor bind lethal toxin-neutralizing antibodies.the bipartite anthrax lethal toxin (letx) consisting of protective antigen (pa) and lethal factor (lf) is a major virulence factor contributing to death from systemic bacillus anthracis infection. the current vaccine elicits antibodies directed primarily to pa; however, in experimental settings serologic responses to lf can neutralize letx and contribute to protection against infection. the goals of the present study were to identify sequential b-cell epitopes of lf and to determine the capacity ...200918981257
macrophage uptake, intracellular localization, and degradation of poly-gamma-d-glutamic acid, the capsular antigen of bacillus anthracis.bacillus anthracis is surrounded by a capsular polypeptide composed of poly-gamma-d-glutamic acid (pga). this antiphagocytic capsule is an essential virulence factor and is shed into body fluids during a murine model of pulmonary anthrax. our previous studies of a murine model for antigen clearance showed that purified pga accumulates in the liver and spleen, most notably in splenic macrophages and the kupffer cells and sinusoidal endothelial cells of the liver. although the tissue and cellular ...200919001075
genetic vaccines for anthrax based on recombinant adeno-associated virus vectors.bacillus anthracis represents a formidable bioterrorism and biowarfare threat for which new vaccines are needed with improved safety and efficacy over current options. toward this end, we created recombinant adeno-associated virus type 1 (raav1) vectors containing synthetic genes derived from the protective antigen (pa) or lethal factor (lf) of anthrax lethal toxin (letx) and tested them for immunogenicity and induction of toxin-neutralizing antibodies in rabbits. codon-optimized segments encodi ...200919002162
development and field testing of a mobile chlorine dioxide generation system for the decontamination of buildings contaminated with bacillus anthracis.the numerous buildings that became contaminated with bacillus anthracis (the bacterium causing the disease anthrax) in 2001, and more recent b. anthracis - related events, point to the need to have effective decontamination technologies for buildings contaminated with biological threat agents. the u.s. government developed a portable chlorine dioxide (clo(2)) generation system to decontaminate buildings contaminated with b. anthracis spores, and this so-called mobile decontamination trailer (mdt ...200918990488
adverse events after anthrax vaccination reported to the vaccine adverse event reporting system (vaers), 1990-2007.during the period march 1, 1998 to january 14, 2007, approximately 6 million doses of anthrax vaccine adsorbed (ava) vaccine were administered. as of january 16, 2007, 4753 reports of adverse events following receipt of ava vaccination had been submitted to the vaccine adverse event reporting system (vaers). taken together, reports to vaers did not definitively link any serious unexpected risk to this vaccine, and review of death and serious reports did not show a distinctive pattern indicative ...200918992783
evaluation of ultrafiltration cartridges for a water sampling apparatus.to determine the efficiency of various ultrafiltration cartridges (ufc) in concentrating test micro-organisms from drinking water.200919191977
biochemical characterization of alanine racemase--a spore protein produced by bacillus anthracis.alanine racemase catalyzes the interconversion of l-alanine and d-alanine and plays a crucial role in spore germination and cell wall biosynthesis. in this study, alanine racemase produced by bacillus anthracis was expressed and purified as a monomer in escherichia coli and the importance of lysine 41 in the cofactor binding octapeptide and tyrosine 270 in catalysis was evaluated. the native enzyme exhibited an apparent k(m) of 3 mm for l-alanine, and a v(max) of 295 micromoles/min/mg, with the ...200919192393
expression, purification, crystallization and preliminary x-ray diffraction analysis of dihydrodipicolinate synthase from bacillus anthracis in the presence of pyruvate.dihydrodipicolinate synthase (dhdps) catalyses the first committed step in the lysine-biosynthesis pathway in bacteria, plants and some fungi. in this study, the expression of dhdps from bacillus anthracis (ba-dhdps) and the purification of the recombinant enzyme in the absence and presence of the substrate pyruvate are described. it is shown that dhdps from b. anthracis purified in the presence of pyruvate yields greater amounts of recombinant enzyme with more than 20-fold greater specific acti ...200919194017
genetic immunization with gpi-anchored anthrax protective antigen raises combined cd1d- and mhc ii-restricted antibody responses by natural killer t cell-mediated help.studies have demonstrated that lipid rafts ultimately regulate the endocytosis of anthrax toxin via clathrin dependent pathway. interestingly, gpi-anchored protein rich rafts have also been shown to be transported down to the endocytic pathway to reducing late endosomes. taking advantage of this parallelism, we tried translating the anthrax toxin natural intoxication mechanism by administering a dna chimera that encoded protective antigen attached to a mammalian gpi-anchor sequence at its c-term ...200919195490
resistance of athymic nude mice to experimental cutaneous bacillus anthracis infection.previous studies in a murine cutaneous anthrax model have demonstrated that hairless and haired hrs/j mice are extremely resistant to bacillus anthracis. because these mice are relatively thymus deficient, we used c57bl/6 athymic nude and euthymic mice to evaluate the relationship between t cell deficiency and this heightened resistance.200919199545
evolution of pathogenicity in the bacillus cereus group.the bacillus cereus group of bacteria comprises soil-dwelling saprophytes but on occasion these bacteria can cause a wide range of diseases in humans, including food poisoning, systemic infections and highly lethal forms of anthrax. while anthrax is almost invariably caused by strains from a single evolutionary lineage, bacillus anthracis, variation in the virulence properties of strains from other lineages has not been fully addressed. using multi-locus sequence data from 667 strains, we recons ...200919200684
a case of pneumonia caused by bacillus anthracis secondary to gastrointestinal anthrax.we present herein an unusual case of anthrax pneumonia secondary to gastrointestinal infection. in this case, severe abdominal pain occurred during the course of a stent placement procedure. the patient had undergone surgery with the prediagnosis of intestinal ischemia. on the second postoperative day, pneumonia developed and b. anthracis grew as the etiologic agent. pathological examination of small-bowel sections revealed findings in accordance with anthrax.200919201638
involvement of tlr2 in innate response to bacillus anthracis infection.the involvement of tlr2 receptor in the innate response to infection with bacillus anthracis was investigated. we studied the response to virulent or attenuated vollum strains in either in vitro assays using macrophage cultures, or in an in vivo model comparing the sensitivity of syrian hamster cells (expressing normal tlr2) to chinese hamster cells (lacking functional tlr2) to infection by the various b. anthracis strains. phagocytosis experiments with murine cell cultures or primary macrophage ...200919201824
evidence for a proton-protein symport mechanism in the anthrax toxin channel.the toxin produced by bacillus anthracis, the causative agent of anthrax, is composed of three proteins: a translocase heptameric channel, (pa(63))(7), formed from protective antigen (pa), which allows the other two proteins, lethal and edema factors (lf and ef), to translocate across a host cell's endosomal membrane, disrupting cellular homeostasis. it has been shown that (pa(63))(7) incorporated into planar phospholipid bilayer membranes forms a channel capable of transporting lf and ef. prote ...200919204186
nicotinamide mononucleotide synthetase is the key enzyme for an alternative route of nad biosynthesis in francisella tularensis.enzymes involved in the last 2 steps of nicotinamide adenine dinucleotide (nad) cofactor biosynthesis, which catalyze the adenylylation of the nicotinic acid mononucleotide (namn) precursor to nicotinic acid dinucleotide (naad) followed by its amidation to nad, constitute promising drug targets for the development of new antibiotics. these enzymes, namn adenylyltransferase (gene nadd) and nad synthetase (gene nade), respectively, are indispensable and conserved in nearly all bacterial pathogens. ...200919204287
anti-toxin antibodies in prophylaxis and treatment of inhalation anthrax.the cdc recommend 60 days of oral antibiotics combined with a three-dose series of the anthrax vaccine for prophylaxis after potential exposure to aerosolized bacillus anthracis spores. the anthrax vaccine is currently not licensed for anthrax postexposure prophylaxis and has to be made available under an investigational new drug protocol. postexposure prophylaxis based on antibiotics can be problematic in cases where the use of antibiotics is contraindicated. furthermore, there is a concern tha ...200919207098
pathogenic bacillus anthracis in the progressive gene losses and gains in adaptive evolution.sequence mutations represent a driving force of adaptive evolution in bacterial pathogens. it is especially evident in reductive genome evolution where bacteria underwent lifestyles shifting from a free-living to a strictly intracellular or host-depending life. it resulted in loss-of-function mutations and/or the acquisition of virulence gene clusters. bacillus anthracis shares a common soil bacterial ancestor with its closely related bacillus species but is the only obligate, causative agent of ...200919208130
identification of bacillus anthracis spore component antigens conserved across diverse bacillus cereus sensu lato strains.we sought to identify proteins in the bacillus anthracis spore, conserved in other strains of the closely related bacillus cereus group, that elicit an immune response in mammals. two high throughput approaches were used. first, an in silico screening identified 200 conserved putative b. anthracis spore components. a total of 192 of those candidate genes were expressed and purified in vitro, 75 of which reacted with the rabbit immune sera generated against b. anthracis spores. the second approac ...200919208616
phylogeny in aid of the present and novel microbial lineages: diversity in bacillus.bacillus represents microbes of high economic, medical and biodefense importance. bacillus strain identification based on 16s rrna sequence analyses is invariably limited to species level. secondly, certain discrepancies exist in the segregation of bacillus subtilis strains. in the rdp/ncbi databases, out of a total of 2611 individual 16s rdna sequences belonging to the 175 different species of the genus bacillus, only 1586 have been identified up to species level. 16s rrna sequences of bacillus ...200919212464
dynamics and energetics: a consensus analysis of the impact of calcium on ef-cam protein complex.we have studied the relationship between dynamical correlations and energetic contributions in an attempt to model the transmission of information inside protein-protein complexes. the complex formed between the edema factor (ef) of bacillus anthracis and calmodulin (cam) was taken as an example, as the formation and stability of the complex depend on the calcium complexation level. the effect of calcium through ef-cam residue network has been investigated with various approaches: 1), the elasti ...200919217845
two small c-type cytochromes affect virulence gene expression in bacillus anthracis.regulated expression of the genes for anthrax toxin proteins is essential for the virulence of the pathogenic bacterium bacillus anthracis. induction of toxin gene expression depends on several factors, including temperature, bicarbonate levels, and metabolic state of the cell. to identify factors that regulate toxin expression, transposon mutagenesis was performed under non-inducing conditions and mutants were isolated that untimely expressed high levels of toxin. a number of these mutations cl ...200919222757
frequency and domain specificity of toxin-neutralizing paratopes in the human antibody response to anthrax vaccine adsorbed.protective antigen (pa) is the cell surface recognition unit of the binary anthrax toxin system and the primary immunogenic component in both the current and proposed "next-generation" anthrax vaccines. several studies utilizing animal models have indicated that pa-specific antibodies, acquired by either active or passive immunization, are sufficient to protect against infection with bacillus anthracis. to investigate the human antibody response to anthrax immunization, we have established a lar ...200919223482
immuno-detection of anthrose containing tetrasaccharide in the exosporium of bacillus anthracis and bacillus cereus strains.bacillus anthracis strains of various origins were analysed with the view to describe intrinsic and persistent structural components of the bacillus collagen-like protein of anthracis glycoprotein associated anthrose containing tetrasaccharide in the exosporium.200919226390
[research and development policy on bioterrorism medical countermeasures in the united states].the united states department of health and human services (dhhs) plays a key role in biodefense, which accounts for almost 80% of the u.s. civilian biodefense budget, which itself has amount to over 500 billion yen a year since the 2001 anthrax mailings and has involved programs based on the hspd-10 "biodefense for the 21st century". to promote r&d on medical countermeasures, the dhhs has invested in basic research and ensuring market, and closely communicated with stakeholders to overcome r&d b ...200919227217
structural and chemical basis for glucosamine 6-phosphate binding and activation of the glms ribozyme.the glms ribozyme is the first naturally occurring catalytic rna that relies on an exogenous, nonnucleotide cofactor for reactivity. from a biochemical perspective, the glms ribozyme derived from bacillus anthracis is the best characterized. however, much of the structural work to date has been done on a variant glms ribozyme, derived from thermoanaerobacter tengcongensis. here we present structures of the b. anthracis glms ribozyme in states before the activating sugar, glucosamine 6-phosphate ...200919228039
the tubulin-like repx protein encoded by the pxo1 plasmid forms polymers in vivo in bacillus anthracis.bacillus anthracis contains two megaplasmids, pxo1 and pxo2, that are critical for its pathogenesis. stable inheritance of pxo1 in b. anthracis is dependent upon the tubulin/ftsz-like repx protein encoded by this plasmid. previously, we have shown that repx undergoes gtp-dependent polymerization in vitro. however, the polymerization properties and localization pattern of repx in vivo are not known. here, we utilize a repx-green fluorescent protein (gfp) fusion to show that repx forms foci and th ...200919233922
livestock keeper perceptions of four indigenous cattle breeds in tsetse infested areas of ethiopia.four cattle breeds indigenous to western and south-western ethiopia--abigar, gurage, horro and sheko--were included in a study of the perceptions of smallholder cattle keepers regarding cattle management, production levels and constraints for production. a semi-structured questionnaire was used and 60 cattle keepers from each of the four areas were interviewed. diseases were reported as the main constraint to cattle production by a majority of livestock keepers in all areas except in the sheko a ...200919234873
hydroxylamine-amplified gold nanoparticles for the naked eye and chemiluminescent detection of sequence-specific dna with notable potential for single-nucleotide polymorphism discrimination.herein, we report a hydroxylamine-amplified gold nanoparticle-based assay with naked eye and chemiluminescent (cl) detection of sequence-specific dna. for the naked eye detection assay, the signal can be observed by naked eye directly, which provides a general way for other biological assays. in contrast, the cl detection method can improve the detection limit by two orders of magnitude as compared to the naked eye detection, and a limit as low as 10 amol of target dna can be sensitively detecte ...200919238286
cutaneous anthrax, west bengal, india, 2007. 200919239777
crystal structure of the bacillus anthracis nucleoside diphosphate kinase and its characterization reveals an enzyme adapted to perform under stress conditions.nucleoside diphosphate kinases (ndks) play an important role in a plethora of regulatory and metabolic functions. inhibition of the b. anthracis ndk mrna results in the formation of nonviable aberrant spores. we report the characterization and crystal structure of the enzyme from b. anthracis nucleoside diphosphate kinase (bandk), the first from sporulating bacteria. the enzyme, although from a mesophilic source, is active at extremes of ph (3.5-10.5), temperature (10-95 degrees c) and ionic str ...200919241473
norepinephrine increases blood pressure but not survival with anthrax lethal toxin in rats.the response of anthrax lethal toxin (letx) induced shock and lethality to conventional therapies has received little study. previously, fluids worsened outcome in letx-challenged rats in contrast to its benefit with lipopolysaccharide (lps) or escherichia coli. the current study investigated norepinephrine treatment.200919242337
dendritic cell targeting of bacillus anthracis protective antigen expressed by lactobacillus acidophilus protects mice from lethal challenge.efficient vaccines potentiate antibody avidity and increase t cell longevity, which confer protection against microbial lethal challenge. a vaccine strategy was established by using lactobacillus acidophilus to deliver bacillus anthracis protective antigen (pa) via specific dendritic cell-targeting peptides to dendritic cells (dcs), which reside in the periphery and mucosal surfaces, thus directing and regulating acquired immunity. the efficiency of oral delivery of l. acidophilus expressing a p ...200919246373
an approach to characterizing single-subunit mutations in multimeric prepores and pores of anthrax protective antigen.heptameric pores formed by the protective antigen (pa) moiety of anthrax toxin translocate the intracellular effector moieties of the toxin across the endosomal membrane to the cytosol of mammalian cells. we devised a protocol to characterize the effects of individual mutations in a single subunit of heptameric pa prepores (pore precursors) or pores. we prepared monomeric pa containing a test mutation plus an innocuous cys-replacement mutation at a second residue (lys563, located on the external ...200919165720
killed but metabolically active bacillus anthracis vaccines induce broad and protective immunity against anthrax.bacillus anthracis is the causative agent of anthrax. we have developed a novel whole-bacterial-cell anthrax vaccine utilizing b. anthracis that is killed but metabolically active (kbma). vaccine strains that are asporogenic and nucleotide excision repair deficient were engineered by deleting the spoiie and uvrab genes, rendering b. anthracis extremely sensitive to photochemical inactivation with s-59 psoralen and uv light. we also introduced point mutations into the lef and cya genes, which all ...200919168734
thioamide hydroxypyrothiones supersede amide hydroxypyrothiones in potency against anthrax lethal factor.anthrax lethal factor (lf) is a critical virulence factor in the pathogenesis of anthrax. a structure-activity relationship (sar) of potential lethal factor inhibitors (lfi) is presented in which the zinc-binding group (zbg), linker, and backbone moieties for a series of hydroxypyrone-based compounds were systematically varied. it was found that hydroxypyrothione zbgs generate more potent inhibitors than hydroxypyrone zbgs. furthermore, coupling the hydroxypyrothione to a backbone group via a th ...200919170530
[cutaneous anthrax: seven cases].anthrax is an acute infection caused by the gram-positive organism, bacillus anthracis, which rarely affects humans under normal conditions. depending on the mode of contamination, there are three distinct clinical forms: pulmonary, gastrointestinal and cutaneous. this type of infection is still common in the developing countries, a fact that should be borne in mind by examining doctors, and in particular by dermatologists. it is important to recognise the clinical aspects of this disease rarely ...200919171223
the survivability of bacillus anthracis (sterne strain) in processed liquid eggs.in this study, we investigated the survival and inactivation kinetics of a surrogate strain of bacillus anthracis (sterne strain) in whole egg (we), egg white (ew), sugared egg yolk (ysu), and salted egg yolk (ysa) at low (-20, 0, and 5 degrees c), moderate (15, 20, 25, 30, 35, and 40 degrees c), and high storage temperatures (45, 50, 55, and 60 degrees c). outgrowth of the spores was measured as lag phase duration (lpd). replication of vegetative cells was measured in terms of growth rate (gr) ...200919171252
monitoring anthrax toxin receptor dissociation from the protective antigen by nmr.the binding of the bacillus anthracis protective antigen (pa) to the host cell receptor is the first step toward the formation of the anthrax toxin, a tripartite set of proteins that include the enzymatic moieties edema factor (ef), and lethal factor (lf). pa is cleaved by a furin-like protease on the cell surface followed by the formation of a donut-shaped heptameric prepore. the prepore undergoes a major structural transition at acidic ph that results in the formation of a membrane spanning po ...200919177347
engineering antibody fragments to fold in the absence of disulfide bonds.disulfide bonds play a critical role in the stabilization of the immunoglobulin beta-sandwich sandwich. under reducing conditions, such as those that prevail in the cytoplasm, disulfide bonds do not normally form and as a result most antibodies expressed in that compartment (intrabodies) accumulate in a misfolded and inactive state. we have developed a simple method for the quantitative isolation of antibody fragments that retain full activity under reducing conditions from large mutant librarie ...200919177559
antimicrobial effects of interferon-inducible cxc chemokines against bacillus anthracis spores and bacilli.based on previous studies showing that host chemokines exert antimicrobial activities against bacteria, we sought to determine whether the interferon-inducible glu-leu-arg-negative cxc chemokines cxcl9, cxcl10, and cxcl11 exhibit antimicrobial activities against bacillus anthracis. in vitro analysis demonstrated that all three cxc chemokines exerted direct antimicrobial effects against b. anthracis spores and bacilli including marked reductions in spore and bacillus viability as determined using ...200919179419
anthrax protective antigen delivered by salmonella enterica serovar typhi ty21a protects mice from a lethal anthrax spore challenge.bacillus anthracis, the etiological agent of anthrax disease, is a proven weapon of bioterrorism. currently, the only licensed vaccine against anthrax in the united states is ava biothrax, which, although efficacious, suffers from several limitations. this vaccine requires six injectable doses over 18 months to stimulate protective immunity, requires a cold chain for storage, and in many cases has been associated with adverse effects. in this study, we modified the b. anthracis protective antige ...200919179420
roles of germination-specific lytic enzymes cwlj and sleb in bacillus anthracis.the structural characteristics of a spore enable it to withstand stresses that typically kill a vegetative cell. spores remain dormant until small molecule signals induce them to germinate into vegetative bacilli. germination requires degradation of the thick cortical peptidoglycan by germination-specific lytic enzymes (gsles). bacillus anthracis has four putative gsles, based upon sequence similarities with enzymes in other species: sleb, cwlj1, cwlj2, and slel. in this study, the roles of sleb ...200919181808
codon-optimized fluorescent proteins designed for expression in low-gc gram-positive bacteria.fluorescent proteins have wide applications in biology. however, not all of these proteins are properly expressed in bacteria, especially if the codon usage and genomic gc content of the host organism are not ideal for high expression. in this study, we analyzed the dna sequences of multiple fluorescent protein genes with respect to codons and gc content and compared them to a low-gc gram-positive bacterium, bacillus anthracis. we found high discrepancies for cyan fluorescent protein (cfp), yell ...200919181829
the listeria monocytogenes sortase-b recognizes varied amino acids at position 2 of the sorting motif.sortases are bacterial enzymes that anchor surface proteins covalently to the peptidoglycan upon cleavage of a motif located at their c-terminal end. motifs recognized by sortases of the class-b (srtb) are defined by the consensus sequence np(q/k)(t/s)(n/g/s)(d/a). evidence supporting this consensus is limited to isdc of staphylococcus aureus and bacillus anthracis, cleaved at motifs npqtn and npktg, respectively. in listeria monocytogenes, strb has two substrates, lmo2185 and lmo2186, containin ...200919129190
detection of anthrax toxin by an ultrasensitive immunoassay using europium nanoparticles.we developed a europium nanoparticle-based immunoassay (enia) for the sensitive detection of anthrax protective antigen (pa). the enia exhibited a linear dose-dependent pattern within the detection range of 0.01 to 100 ng/ml and was approximately 100-fold more sensitive than enzyme-linked immunosorbent assay (elisa). false-positive results were not observed with serum samples from healthy adults, mouse plasma without pa, or plasma samples collected from mice injected with anthrax lethal factor o ...200919129473
anthrax protective antigen administered by dna vaccination to distinct subcellular locations potentiates humoral and cellular immune responses.based on the hypothesis that immune outcome can be influenced by the form of antigen administered and its ability to access various antigen-processing pathways, we targeted the 63 kda fragment of protective antigen (pa) of bacillus anthracis to various subcellular locations by dna chimeras bearing a set of signal sequences. these targeting signals, namely, lysosome-associated membrane protein 1 (lamp1), tissue plasminogen activator (tpa) and ubiquitin, encoded various forms of pa viz. lysosomal, ...200919130551
detection of disease outbreaks by the use of oral manifestations.oral manifestations of diseases caused by bioterrorist agents could be a potential data source for biosurveillance. this study had the objectives of determining the oral manifestations of diseases caused by bioterrorist agents, measuring the prevalence of these manifestations in emergency department reports, and constructing and evaluating a detection algorithm based on them. we developed a software application to detect oral manifestations in free text and identified positive reports over three ...200919131324
role of visible light-activated photocatalyst on the reduction of anthrax spore-induced mortality in mice.photocatalysis of titanium dioxide (tio(2)) substrates is primarily induced by ultraviolet light irradiation. anion-doped tio(2) substrates were shown to exhibit photocatalytic activities under visible-light illumination, relative environmentally-friendly materials. their anti-spore activity against bacillus anthracis, however, remains to be investigated. we evaluated these visible-light activated photocatalysts on the reduction of anthrax spore-induced pathogenesis.200919132100
conservation in the face of diversity: multistrain analysis of an intracellular bacterium.with the recent completion of numerous sequenced bacterial genomes, notable advances have been made in understanding the level of conservation between various species. however, relatively little is known about the genomic diversity among strains. we determined the complete genome sequence of the florida strain of anaplasma marginale, and near complete (>96%) sequences for an additional three strains, for comparative analysis with the previously fully sequenced st. maries strain genome.200919134224
rapid, high-throughput, culture-based pcr methods to analyze samples for viable spores of bacillus anthracis and its surrogates.to rapidly remediate facilities after a biothreat agent release, improved turnaround times are needed for sample analysis. current methods to confirm the presence of a viable biothreat agent are limited by low sample throughput. we have developed a rapid-viability-polymerase chain reaction (rv-pcr) method to determine the presence of viable spores. the method combines high-throughput sample processing with 96-well pcr analysis, which measures a change in real-time, quantitative pcr response aris ...200919141303
bioterrorism for the respiratory physician.terrorist attacks by definition are designed to cause fear and panic. there is no question that a terrorist attack using biological agents would present a grave threat to stability of the society in which they were released. early recognition of such a bioterrorist attack is crucial to containing the damage they could cause. as many of the most likely bioterrorism agents present with pulmonary disease, respiratory physicians may be crucial in the initial recognition and diagnosis phase, and cert ...200919144044
classification of select category a and b bacteria by fourier transform infrared spectroscopy.fourier transform infrared (ft-ir) spectroscopy historically is a powerful tool for the taxonomic classification of bacteria by genus, species, and strain when they are grown under carefully controlled conditions. relatively few reports have investigated the determination and classification of pathogens such as the national institute of allergy and infectious diseases (niaid) category a bacillus anthracis spores and cells (ba), yersinia species, francisella tularensis (ft), and category b brucel ...200919146715
caspase- and p53-dependent apoptosis in breast carcinoma cells induced by a synthetic selenadiazole derivative.selenadiazole derivative is one kind of synthetic organoselenium compounds with potent and broad-spectrum antitumor activity. in this study, we showed that anthrax [1,2-c] [1,2,5] selenadiazolo-6,11-dione (asdo), an novel selenadiazole derivative, induced time- and dose-dependent apoptotic cell death in mcf-7 human breast carcinoma cells, as indicated by accumulation of sub-g1 cell population, dna fragmentation, nuclear condensation, caspase activation and parp cleavage. asdo-induced apoptosis w ...200919146838
stochastic gating and drug-ribosome interactions.gentamicin is a potent antibiotic that is used in combination therapy for inhalation anthrax disease. the drug is also often used in therapy for methicillin-resistant staphylococcusaureus. gentamicin works by flipping a conformational switch on the ribosome, disrupting the reading head (i.e., 16s ribosomal decoding bases 1492-1493) used for decoding messenger rna. we use explicit solvent all-atom molecular simulation to study the thermodynamics of the ribosomal decoding site and its interaction ...200919146858
antigen-specific human polyclonal antibodies from hyperimmunized cattle.antigen-specific human polyclonal antibodies (hpabs), produced by hyperimmunization, could be useful for treating many human diseases. however, yields from available transgenic mice and transchromosomic (tc) cattle carrying human immunoglobulin loci are too low for therapeutic applications. we report a tc bovine system that produces large yields of hpabs. tc cattle were generated by transferring a human artificial chromosome vector carrying the entire unrearranged, human immunoglobulin heavy (hi ...200919151699
the structure of rph, an exoribonuclease from bacillus anthracis, at 1.7 a resolution.maturation of trna precursors into functional trna molecules requires trimming of the primary transcript at both the 5' and 3' ends. cleavage of nucleotides from the 3' stem of trna precursors, releasing nucleotide diphosphates, is accomplished in bacillus by a phosphate-dependent exoribonuclease, rph. the crystal structure of this enzyme from b. anthracis has been solved by molecular replacement to a resolution of 1.7 a and refined to an r factor of 19.3%. there is one molecule in the asymmetri ...200919153445
seasonality of bacillus species isolated from blood cultures and its potential implications.because they are rarely associated with actual infections, bacillus species are usually defined as contaminants. however, when isolated, they require precise laboratory identification and may influence treatment.200919162377
increased african-american involvement in vaccine studies. 200919095169
what is the relevance of lung epithelial cells during the dissemination of spores in inhalational anthrax? 200919098284
a short course of antibiotic treatment is effective in preventing death from experimental inhalational anthrax after discontinuing antibiotics.postexposure prophylaxis of inhalational anthrax requires prolonged antibiotic therapy or antibiotics and vaccination. the duration of treatment for established anthrax is controversial, because retained spores may germinate and cause disease after antibiotics are discontinued. using rhesus macaques, we determined whether a short course of antibiotic treatment, as opposed to prophylaxis, could effectively treat inhalational anthrax and prevent disease caused by the germination of spores after di ...200919099484
mucosal immunization with attenuated salmonella enterica serovar typhi expressing protective antigen of anthrax toxin (pa83) primes monkeys for accelerated serum antibody responses to parenteral pa83 vaccine.salmonella enterica serovar typhi vaccine strain cvd 908-htra was genetically engineered for stable plasmid-based expression of protective antigen of anthrax toxin (pa83) fused with the export protein clya (clya-pa83). the priming potential of cvd 908-htra expressing clya-pa83 was assessed in 12 rhesus and 20 cynomolgus macaques that were immunized mucosally (i.e., intranasally) on days 0 and 14. a parenteral booster with purified pa83 plus alum was given to rhesus macaques on days 42 and 225; c ...200919099487
induction of autophagy by anthrax lethal toxin.autophagy is an evolutionary conserved intracellular process whereby cells break down long-lived proteins and organelles. accumulating evidences suggest increasing physiological significance of autophagy in pathogenesis of infectious diseases. anthrax lethal toxin (lt) exerts its influence on numerous cells and herein, we report a novel effect of lt-induced autophagy on mammalian cells. several autophagy biochemical markers including lc3-ii conversion, increased punctuate distribution of gfp-lc3 ...200919103170
extensive antibody cross-reactivity among infectious gram-negative bacteria revealed by proteome microarray analysis.antibodies provide a sensitive indicator of proteins displayed by bacteria during sepsis. because signals produced by infection are naturally amplified during the antibody response, host immunity can be used to identify biomarkers for proteins that are present at levels currently below detectable limits. we developed a microarray comprising approximately 70% of the 4066 proteins contained within the yersinia pestis proteome to identify antibody biomarkers distinguishing plague from infections ca ...200919112181
efficacy of a vaccine based on protective antigen and killed spores against experimental inhalational anthrax.protective antigen (pa)-based anthrax vaccines acting on toxins are less effective than live attenuated vaccines, suggesting that additional antigens may contribute to protective immunity. several reports indicate that capsule or spore-associated antigens may enhance the protection afforded by pa. addition of formaldehyde-inactivated spores (fis) to pa (pa-fis) elicits total protection against cutaneous anthrax. nevertheless, vaccines that are effective against cutaneous anthrax may not be so ag ...200919114543
[the dirty dozen].the term "the dirty dozen" refers to the 12 biological agents such as, for example, the anthrax bacillus or botulinum toxin that could be used as biological weapons. even if their military use is considered unlikely physicians should be familiar with the problematic because these pathogens can also occur naturally or, respectively, cause disease as the consequence of a laboratory accident. it is of decisive importance to make the diagnosis as quickly as possible in order to limit any further spr ...200919115185
anthrax lethal toxin triggers the formation of a membrane-associated inflammasome complex in murine macrophages.multiple microbial components trigger the formation of an inflammasome complex that contains pathogen-specific nucleotide oligomerization and binding domain (nod)-like receptors (nlrs), caspase-1, and in some cases the scaffolding protein asc. the nlr protein nalp1b has been linked to anthrax lethal toxin (lt)-mediated cytolysis of murine macrophages. here we demonstrate that in unstimulated j774a.1 macrophages, caspase-1 and nalp1b are membrane associated and part of approximately 200- and appr ...200919124602
inflammasomes: guardians of cytosolic sanctity.the innate immune system is critical in recognizing bacterial and viral infections to evoke a proper immune response. certain members of the intracellular nucleotide-binding and oligomerization domain (nod)-like receptor (nlr) family detect microbial components in the cytosol and trigger the assembly of large caspase-1-activating complexes termed inflammasomes. autoproteolytic maturation of caspase-1 zymogens within these inflammasomes leads to maturation and secretion of the pro-inflammatory cy ...200919120479
a genetic screen to identify bacteriophage lysins.lysins are phage-encoded, peptidoglycan (cell wall) hydrolases that accumulate in the bacterial cytoplasm during a lytic infection cycle. late during infection, the lysins undergo holin-mediated translocation across the inner membrane into the peptidoglycan matrix where they cleave cell wall covalent bonds required for wall stability and allow bacterial lysis and progeny phage release. this potent hydrolytic activity is now the foundation of a powerful genetic-based screening process for the ide ...200919082564
how to extend the use of grid-based interaction energy maps from chemistry to biotopics.many computational tools routinely used in chemistry could successfully be applied to the biosciences since protein-protein and protein-ligand interactions are governed by the laws of chemistry. this paper shows that it is possible to extend the use of existing computational tools from their traditional application field (e.g. chemistry) to culturally-related research areas by the implementation of simple but well-designed utilities. in particular, a computational strategy obtained by combining ...200919085992
use of superabsorbent polymer gels for surface decontamination of bacillus anthracis spores.this study evaluated the inactivation of bacillus anthracis vollum spores dried on a nonporous surface using a superabsorbent polymer (sap) gel containing commercially available liquid decontaminants.200919055629
photocatalytic inactivation of bacillus anthracis by titania nanomaterials.photocatalytic inactivation of bacillus anthracis was studied by using titania nanomaterials and uva light. experimental data clearly indicated that, time of exposure, quantity of catalyst, intensity of light, particle size and sunlight affected the inactivation. it also demonstrated the pseudo-first order behavior of inactivation kinetics and pointed out the enhanced rate of inactivation in the presence of nano-titania existing as a mixture of anatase and rutile phases. the values of rate const ...200919056174
molecular analysis of the interaction of anthrax adenylyl cyclase toxin, edema factor, with 2'(3')-o-(n-(methyl)anthraniloyl)-substituted purine and pyrimidine nucleotides.bacillus anthracis causes anthrax disease and exerts its deleterious effects by the release of three exotoxins: lethal factor, protective antigen, and edema factor (ef), a highly active calmodulin-dependent adenylyl cyclase (ac). however, conventional antibiotic treatment is ineffective against either toxemia or antibiotic-resistant strains. thus, more effective drugs for anthrax treatment are needed. previous studies from our laboratory showed that mammalian membranous ac (mac) exhibits broad s ...200919056899
unique gtp-binding pocket and allostery of uridylate kinase from a gram-negative phytopathogenic bacterium.using x-ray diffraction methodology, we have successfully determined the tertiary structures of the apo- and gtp-bound forms of uridylate kinase (umpk) from the gram-negative plant pathogen xanthomonas campestris with crystals grown under a strong magnetic field. the flexible atp- and ump-binding loops are clearly shown under this situation. x. campestris umpk contains a unique patch of noticeably positive nature from residue r100 to residue r127, allowing it to form a special gtp-binding pocket ...200919059268
the cmg2 elisa for evaluating inhibitors of the binding of anthrax toxin protective antigen to its receptor.anthrax toxin comprises a protective antigen (pa) of mw 83 kda, a lethal factor (lf) and an edema factor (ef). upon binding to its receptor on cell surfaces, pa(83) is enzymatically cleaved to a 63 kda product (pa(63)), followed by binding of lf or ef, receptor-mediated internalisation of these factors, and production of their toxic effects. the high-affinity binding of pa(83) to its receptor is essential for the intoxication process. to study the interaction between the pa and its receptor, and ...200919049885
comparative genomic study of spo0e family genes and elucidation of the role of spo0e in bacillus anthracis.the propensity of bacterium to sporulate or retain the vegetative form depends on the amount of phosphorylated spo0a (spo0a(-p)), regulated by spo0e multigene family of phosphatases (spo0e, yisi and ynzd). phylogenetic analysis revealed that spo0e multigene family of phosphatases (smfp) descends in two distinct clades of aerobic (bacillus cluster) and anaerobic (clostridia cluster) sporulating bacteria. high sequence conservation within species gives a notion that these members could have evolve ...200919050850
europium-based fluorescence nanoparticle sensor for rapid and ultrasensitive detection of an anthrax biomarker. 200919053099
mapping of proteomic composition on the surfaces of bacillus spores by atomic force microscopy-based immunolabeling.atomic force microscopy (afm) provides a unique capability to image high-resolution architecture and structural dynamics of pathogens (e.g., viruses, bacteria, and bacterial spores) at near-molecular resolution in native conditions. further development of atomic force microscopy to enable the correlation of pathogen protein surface structures with specific gene products is essential to understand the mechanisms of the pathogen life cycle. we applied an afm-based immunolabeling technique for the ...200919063625
association of bacillus anthracis capsule with lethal toxin during experimental infection.bacillus anthracis lethal toxin (lt) was characterized in plasma from infected african green monkeys, rabbits, and guinea pigs. in all cases, during the terminal phase of infection only the protease-activated 63-kda form of protective antigen (pa(63)) and the residual 20-kda fragment (pa(20)) were detected in the plasma. no uncut pa with a molecular mass of 83 kda was detected in plasma from toxemic animals during the terminal stage of infection. pa(63) was largely associated with lethal factor ...200919064632
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