Publications

TitleAbstractYear(sorted ascending)
Filter
PMID
Filter
peptide sequences identified by phage display are immunodominant functional motifs of pet and pic serine proteases secreted by escherichia coli and shigella flexneri.plasmid-encoded toxin (pet) and protein involved in colonization (pic), are serine protease autotransporters of enterobacteriaceae (spates) secreted by enteroaggregative escherichia coli (eaec), which display the gdsgsg sequence or the serine motif. our research was directed to localize functional sites in both proteins using the phage display method. from a 12mer linear and a 7mer cysteine-constrained (c7c) libraries displayed on the m13 phage piii protein we selected different mimotopes using ...200919772881
the pathogenic properties of a novel and conserved gene product, kerv, in proteobacteria.identification of novel virulence factors is essential for understanding bacterial pathogenesis and designing antibacterial strategies. in this study, we uncover such a factor, termed kerv, in proteobacteria. experiments carried out in a variety of eukaryotic host infection models revealed that the virulence of a pseudomonas aeruginosa kerv null mutant was compromised when it interacted with amoebae, plants, flies, and mice. bioinformatics analyses indicated that kerv is a hypothetical methyltra ...200919779606
genome sequences of escherichia coli b strains rel606 and bl21(de3).escherichia coli k-12 and b have been the subjects of classical experiments from which much of our understanding of molecular genetics has emerged. we present here complete genome sequences of two e. coli b strains, rel606, used in a long-term evolution experiment, and bl21(de3), widely used to express recombinant proteins. the two genomes differ in length by 72,304 bp and have 426 single base pair differences, a seemingly large difference for laboratory strains having a common ancestor within t ...200919786035
computational study of the conformational structures of saccharides in solution based on j couplings and the "fast sugar structure prediction software".this article reports on the implementation of j coupling calculations in our recently developed fast sugar structure prediction software (fsps). the fsps combines a smart and exhaustive algorithm to search through conformational space with the calculation of different experimental nuclear magnetic resonance observables to establish the conformation of saccharides in solution. using our algorithm in combination with nmr data, we investigate the solution structure of three simple disaccharides (me ...200919795837
overseas outbreaks of infectious intestinal disease identified in scotland, 2003 to 2007.this article presents information on all potential outbreaks of infectious intestinal disease (iid) identified by health protection scotland (hps) involving residents of scotland. unlike other systems, this alert system covers potential outbreaks of iid rather than apparently sporadic cases and covers all gastrointestinal pathogens, all visited countries, and all groups of travelers.200919796102
uropathogenic escherichia coli suppresses the host inflammatory response via pathogenicity island genes sisa and sisb.extraintestinal pathogenic escherichia coli can successfully colonize the urinary tract of the immunocompetent host. in part, this is accomplished by dampening the host immune response. indeed, the sisa and sisb genes (shia-like inflammation suppressor genes a and b) of uropathogenic e. coli strain cft073, homologs of the shigella flexneri shi-2 pathogenicity island gene shia, suppress the host inflammatory response. a double deletion mutant (deltasisa deltasisb) resulted in a hyperinflammatory ...200919797063
effects of enteropathogenic bacteria & lactobacilli on chemokine secretion & toll like receptor gene expression in two human colonic epithelial cell lines.the intestinal epithelium is part of the innate immune system responding to contact with pathogenic or commensal bacteria. the objective of this study was to compare innate responses of intestinal epithelial cell lines to pathogenic bacteria and to lactobacilli.200919797815
[dysentery and amoebiasis in poland in 2007].the number as well as incidence rate of notified as shigellosis, bacillary dysentery cases in xxi century are low. only 64 cases were notified in the year 2007 (incidence rate 0.17/100,000 population), while 35 (incidence rate 0.09) were notified in 2006 and median in the 2001-2005 years was 80, incidence rate 0.21/100,000 population. since 2000 no one-death case was notified. seven imported cases were notified as they got infection being abroad, in egypt 6: 4 cases got s. flexneri, two s. sonne ...200919799247
proteome analysis of an attenuated francisella tularensis dsba mutant: identification of potential dsba substrate proteins.francisella tularensis (f. tularensis) is highly infectious for humans via aerosol route and untreated infections with the highly virulent subsp. tularensis can be fatal. our knowledge regarding key virulence determinants has increased recently but is still somewhat limited. surface proteins are potential virulence factors and therapeutic targets, and in this study, we decided to target three genes encoding putative membrane lipoproteins in f. tularensis lvs. one of the genes encoded a protein w ...200919799467
antibiotic resistance among shigella serogroups isolated in tehran, iran (2002-2004). 200919801811
autophagy in immunity against intracellular bacteria.autophagy is an innate immune defense mechanism against various intracellular bacterial pathogens, such as salmonella enterica serovar typhimurium (s. typhimurium), listeria monocytogenes and shigella flexneri. s. typhimurium uses type three secretion systems (t3sss) to invade mammalian cells and replicate in salmonella-containing vacuoles (scvs). a small population of intracellular s. typhimurium is targeted by autophagy shortly after infection. evidence suggests that these bacteria are present ...200919802566
spa15 of shigella flexneri is secreted through the type iii secretion system and prevents staurosporine-induced apoptosis.shigella flexneri is a gram-negative, facultative intracellular pathogen that invades the colonic epithelium and causes bacillary dysentery. we previously demonstrated that s. flexneri inhibits staurosporine-induced apoptosis in infected epithelial cells and that a deltamxie mutant is unable to inhibit apoptosis. therefore, we hypothesized that an mxie-regulated gene was responsible for protection of epithelial cells from apoptosis. analysis of all mxie-regulated genes yielded no mutants that la ...200919805534
shigella infection of intestinal epithelium and circumvention of the host innate defense system.shigella, gram-negative bacteria closely related to escherichia coli, are highly adapted human pathogens that cause bacillary dysentery. although shigella have neither adherence factors nor flagella required for attaching or accessing the intestinal epithelium, shigella are capable of colonizing the intestinal epithelium by exploiting epithelial-cell functions and circumventing the host innate immune response. during shigella infection, they deliver many numbers of effectors through the type iii ...200919812985
the shigella dysenteriae serotype 1 proteome, profiled in the host intestinal environment, reveals major metabolic modifications and increased expression of invasive proteins.shigella dysenteriae serotype 1 (sd1) causes the most severe form of epidemic bacillary dysentery. we present the first comprehensive proteome analysis of this pathogen, profiling proteins from bacteria cultured in vitro and bacterial isolates from the large bowel of infected gnotobiotic piglets (in vivo). overall, 1061 distinct gene products were identified. differential display analysis revealed that sd1 cells switched to an anaerobic energy metabolism in vivo. high in vivo abundances of amino ...200919813213
comparative genomics reveal the mechanism of the parallel evolution of o157 and non-o157 enterohemorrhagic escherichia coli.among the various pathogenic escherichia coli strains, enterohemorrhagic e. coli (ehec) is the most devastating. although serotype o157:h7 strains are the most prevalent, strains of different serotypes also possess similar pathogenic potential. here, we present the results of a genomic comparison between ehecs of serotype o157, o26, o111, and o103, as well as 21 other, fully sequenced e. coli/shigella strains. all ehecs have much larger genomes (5.5-5.9 mb) than the other strains and contain sur ...200919815525
antibiotic therapy for shigella dysentery.shigella dysentery is a relatively common illness and occasionally causes death, worldwide. mild symptoms are self-limiting but in more severe cases, antibiotics are recommended for cure and preventing relapse. the antibiotics recommended are diverse, have regional differences in sensitivity, and have side effects.200919821387
prevalence of staphylococcus aureus and intestinal parasites among food handlers in sanliurfa, southeastern anatolia.food-borne diseases represent a persistent global health burden, and food handlers play a major role in their transmission. staphylococcus aureus carriage and intestinal parasitism are important risk factors for the contamination of food and water. this study was undertaken to determine the prevalence of staphylococcus aureus and intestinal parasites among food handlers working in sanliurfa, southeastern anatolia.200919823157
secretory iga-mediated neutralization of shigella flexneri prevents intestinal tissue destruction by down-regulating inflammatory circuits.shigella, a gram-negative invasive enteropathogenic bacterium responsible for bacillary dysentery, causes the rupture, invasion, and inflammatory destruction of the human colonic mucosa. we explored the mechanisms of protection mediated by shigella lps-specific secretory iga (siga), the major mucosal ab induced upon natural infection. bacteria, siga, or siga-s. flexneri immune complexes were administered into rabbit ligated intestinal loops containing a peyer's patch. after 8 h, localizations of ...200919828639
beneficial role of green plantain [musa paradisiaca] in the management of persistent diarrhea: a prospective randomized trial.to evaluate the beneficial effects of green plantain-based diet on stool volume, frequency and weight gain as compared with a traditional yogurt-based diet in children with persistent diarrhea.200919828902
how autophagy regulates the host cell signaling associated with the postpartum bacteria cocoon experienced as a danger signal.shigella, the causative agent of human bacillary dysentery, invades the host cell, rapidly breaking the phagosome and multiplying in the cytosol. here, we summarize our recent work showing the targeting of the leftover membrane remnants to autophagy together with trapped membrane-associated signaling molecules recruited during the immediate early entry step. we suggest that this mechanism participates in the bacteria-dependent orchestration of the cell response. moreover, we propose that this si ...200919829050
effect of x-ray treatments on inoculated escherichia coli o157: h7, salmonella enterica, shigella flexneri and vibrio parahaemolyticus in ready-to-eat shrimp.this study was conducted to evaluate the inactivation effect of x-ray treatments on escherichia coli o157: h7, salmonella enteric (s. enterica), shigella flexneri (s. flexneri) and vibrio parahaemolyticus (v. parahaemolyticus) artificially inoculated in ready-to-eat (rte) shrimp. a mixed culture of three strains of each tested pathogen was used to inoculate rte shrimp. the shrimp samples were inoculated individually with selected pathogenic bacteria then aseptically placed in sterile plastic cup ...200919835772
the mannitol operon repressor mtlr belongs to a new class of transcription regulators in bacteria.many bacteria express phosphoenolpyruvate-dependent phosphotransferase systems (pts). the mannitol-specific pts catalyze the uptake and phosphorylation of d-mannitol. the uptake system comprises several genes encoded in the single operon. the expression of the mannitol operon is regulated by a proposed transcriptional factor, mannitol operon repressor (mtlr) that was first studied in escherichia coli. here we report the first crystal structures of mtlr from vibrio parahemeolyticus (vp-mtlr) and ...200919840941
escherichia coli as reservoir for macrolide resistance genes.the plasmid-borne mph(a) gene that confers resistance to azithromycin and has recently emerged in shigella sonnei is present in multidrug- and non-multidrug-resistant escherichia coli isolates from 4 continents. further spread of mph(a) to shigella and salmonella spp. may be expected.200919861064
physicochemical, nutritional and antibacterial characteristics of the fruit of bromelia pinguin l.bromelia pinguin l. is a plant native to sinaloa, mexico, where its fruit is used as food or as a phytotherapeutic agent. the fruits of b. pinguin were characterized and they could be considered as a functional food. these fruits show an average weight of 13.7 g and a yellow color of high luminosity (b* = 43.2, l* = 74.5). the values for acidity (4.6%, as citric acid) and ph (3.7) of b. pinguin fruit are similar to those of citrics. the edible portion is characterized by a high content of vitami ...200919536651
enteroinvasive escherichia coli vs. shigella flexneri: how different patterns of gene expression affect virulence.important features of the enteroinvasive escherichia coli (eiec) phenotype and gene expression likely to confer eiec with a lower ability to cause disease than shigella flexneri were described here for the first time. to confirm the lower pathogenicity of eiec, we have analyzed the keratoconjunctivitis developed in guinea-pigs with eiec or s. flexneri. shigella flexneri induced a more pronounced proinflammatory response, whereas eiec induced a mild form of the disease. eiec showed a significantl ...200919889166
pneumonia caused by shigella sonnei in man returned from india. 200919891897
helicobacter pylori induces mapk phosphorylation and ap-1 activation via a nod1-dependent mechanism.helicobacter pylori rapidly activates mapks and transcription factors, nf-kappab and ap-1, in gastric epithelial cells following host attachment. activation of these signal transducers is largely dependent on the cag pathogenicity island (cagpai)-encoded type iv secretion system. h. pylori was shown to translocate peptidoglycan through the type iv secretion system, which is recognized by the pathogen recognition molecule, nod1, thus resulting in nf-kappab activation. the mechanisms of h. pylori- ...200920007577
trends in antimicrobial resistance in shigella species in karachi, pakistan.shigellosis is a common cause of morbidity, especially in the very young and old, in developing countries. the disease is treated with antibiotics. surveillance of antimicrobial resistance trends is essential owing to the global emergence of antimicrobial resistance.200920009283
purification, characterization, and gene cloning of glucose-1-phosphatase from citrobacter braakii.citrobacter braakii produced an intracellular acid glucose phosphatase (agpc) which was purified 986 fold to homogeneity with the specific activity of 286 units/mg. agpc hydrolyzed a wide variety of phosphorylated compounds with high activity for glucose-1-phosphate and glucose-6-phosphate. the optimum ph and temperature for the enzyme activity was ph 5.0 and 45 degrees c, respectively. the km value for glucose-1-phosphate was 5.12 mm with a vmax 27.8 u mg(-1). its molecular weight was 46 kda by ...200919940380
vaccines for enteric diseases: update on recent developments.the 5th international conference on vaccines for enteric diseases (ved) attracted more than 250 delegates, mainly from industrialized countries. a total of 56 papers were presented and 46 posters were displayed to update recent developments in the field of enteric diseases and vaccine development. this 3-day event enabled academic research institutions, pharmaceutical and biotech companies, and international donors to get a sense of what has been going on since the last ved conference in 2007. t ...200919943760
inactivated and subunit vaccines to prevent shigellosis.shigellosis remains a formidable disease globally, with children of the developing world bearing the greatest number of infections. the need for an affordable, safe and efficacious vaccine has persisted for decades. vaccines to prevent shigellosis can be divided into living and nonliving approaches. several nonliving shigella vaccines are currently at different stages of development and show substantial promise. outlined here is an overview of multiple nonliving vaccine technologies, highlightin ...200919943764
in this issue.shigellosis, dysentery - by whatever name - don't kiss the chimps: pp. 5029-5045with a 10-15% mortality rate when untreated in young children and immunedeficient patients, over one million deaths per year are attributable to this primate/human-only disease. furthermore, the shigella spp. have developed resistance to b-lactam, tetracycline, and aminoglycoside antibiotics very rapidly. a non-primate model of the disease is based on gnotobiotic piglets. aerobically grown bacteria shift to anaerobic ...200919921678
a changing picture of shigellosis in southern vietnam: shifting species dominance, antimicrobial susceptibility and clinical presentation.shigellosis remains considerable public health problem in some developing countries. the nature of shigellae suggests that they are highly adaptable when placed under selective pressure in a human population. this is demonstrated by variation and fluctuations in serotypes and antimicrobial resistance profile of organisms circulating in differing setting in endemic locations. antimicrobial resistance in the genus shigella is a constant threat, with reports of organisms in asia being resistant to ...200920003464
spatial distribution of diarrhoea and microbial quality of domestic water during an outbreak of diarrhoea in the tshikuwi community in venda, south africa.total microbial quality assessment and geographical information system were used for evaluating the quality of water and the spatial distribution of diarrhoea cases in tshikuwi, a rural community in south africa, during an outbreak of diarrhoea. the water-abstraction points included two groundwater storage tanks, namely tank 1 and tank 2 and the khandanama river. indicator microbial counts for total coliforms, faecal coliforms, enterococci, and heterotrophic bacteria exceeded the limit for no ri ...200919902801
studies on the antidiarrhoeal activity of aegle marmelos unripe fruit: validating its traditional usage.aegle marmelos (l.) correa has been widely used in indigenous systems of indian medicine due to its various medicinal properties. however, despite its traditional usage as an anti-diarrhoeal there is limited information regarding its mode of action in infectious forms of diarrhoea. hence, we evaluated the hot aqueous extract (decoction) of dried unripe fruit pulp of a. marmelos for its antimicrobial activity and effect on various aspects of pathogenicity of infectious diarrhoea.200919930633
a unified approach to molecular epidemiology investigations: tools and patterns in california as a case study for endemic shigellosis.shigellosis causes diarrheal disease in humans from both developed and developing countries, and multi-drug resistance is an emerging problem. the objective of this study is to present a unified approach that can be used to characterize endemic and outbreak patterns of shigellosis using use a suite of epidemiologic and molecular techniques. the approach is applied to a california case study example of endemic shigellosis at the population level.200919930709
[development of taqman real-time pcr in detection of aeromonas hydrophila].to develop a taqman real-time pcr for the detection of aeromonas hydrophila.200919954074
[investigation of a norovirus outbreak through contaminated centralized water supply system].to investigate the etiology and source of an infectious diarrhea outbreak and control the epidemic.200919954078
structural mimicry of o-antigen by a peptide revealed in a complex with an antibody raised against shigella flexneri serotype 2a.the use of carbohydrate-mimicking peptides to induce immune responses against surface polysaccharides of pathogenic bacteria offers a novel approach to vaccine development. factors governing antigenic and immunogenic mimicry, however, are complex and poorly understood. we have addressed this question using the anti-lipopolysaccharide monoclonal antibody f22-4, which was raised against shigella flexneri serotype 2a and shown to protect against homologous infection in a mouse model. in a previous ...200919328810
antimicrobial susceptibility and mechanisms of resistance in shigella and salmonella isolates from children under five years of age with diarrhea in rural mozambique.the antimicrobial susceptibility and mechanisms of resistance of 109 shigella and 40 salmonella isolates from children with diarrhea in southern mozambique were assessed. the susceptibility to seven antimicrobial agents was tested by disk diffusion, and mechanisms of resistance were searched by pcr or colorimetric method. a high proportion of shigella isolates were resistant to chloramphenicol (chl) (52%), ampicillin (amp) (56%), tetracycline (tet) (66%), and trimethoprim-sulfamethoxazole (sxt) ...200919332670
solar disinfection (sodis) and subsequent dark storage of salmonella typhimurium and shigella flexneri monitored by flow cytometry.pathogenic enteric bacteria are a major cause of drinking water related morbidity and mortality in developing countries. solar disinfection (sodis) is an effective means to fight this problem. in the present study, sodis of two important enteric pathogens, shigella flexneri and salmonella typhimurium, was investigated with a variety of viability indicators including cellular atp levels, efflux pump activity, glucose uptake ability, and polarization and integrity of the cytoplasmic membrane. the ...200919332832
[postinfection irritable bowel syndrome].to characterize pathogenesis, clinicolaboratory criteria and treatment of postinfection irritable bowel syndrome (pics).200919334488
expression, purification, crystallization and preliminary x-ray diffraction analysis of the tonb-dependent haem outer membrane transporter shua from shigella dysenteriae.as part of efforts towards understanding the crystallization of membrane proteins and membrane transport across the outer membrane of gram-negative bacteria, the tonb-dependent haem outer membrane transporter shua of shigella dysenteriae bound to heavy atoms was crystallized in several crystallization conditions using detergents. the insertion of a his(6) tag into an extracellular loop of shua, instead of downstream of the escherichia coli peptide signal, allowed efficient targeting to the outer ...200919342792
global etiology of travelers' diarrhea: systematic review from 1973 to the present.fifty-one published studies of travelers' diarrhea (td) were examined to look for regional differences in pathogens identified. enterotoxigenic e. coli was detected in 1,678/5,518 (30.4%) of td cases overall, with rates in latin america/caribbean (l. america), africa, south asia, and southeast asia of 1,109/3,302 (33.6%), 389/1,217 (31.2%), 153/499 (30.6%), and 36/500 (7.2%), respectively (p < 0.001). enteroaggregative e. coli was the second most common agent in l. america, found in 166/689 (24. ...200919346386
synthesis, characterization, and immunogenicity in mice of shigella sonnei o-specific oligosaccharide-core-protein conjugates.shigellosis, an enteric disease, is on the world health organization's priority prevention list. in one study, the shigella sonnei o-specific polysaccharide (o-sp)-protein conjugate showed 72% protection against disease in israeli army recruits exposed to high rates (8-14%) of infection. the protection was related to vaccine-induced igg anti-o-sp levels. synthetic oligosaccharides of shigella dysenteriae type 1, bound by their reducing ends to a carrier protein ("sun"-type configuration), induce ...200919346477
molecular characterisation of the reca locus in clinical isolates of verocytotoxigenic e. coli o157:h7.molecular epidemiology of verocytoxigenic escherichia coli o157:h7 is important to help elucidate reservoirs and modes of transmission, particularly between animals and humans. as the reca gene locus is now beginning to gain application in bacterial genotyping schemes, and as it has not been examined previously in e. coli o157 isolates, this study aims to examine potential polymorphic variation as a possible epidemiological marker for the subspecies characterisation of clinically significant ver ...200919348125
the pic protease of enteroaggregative escherichia coli promotes intestinal colonization and growth in the presence of mucin.enteroaggregative escherichia coli (eaec) is increasingly being recognized as a cause of diarrheal disease in diverse populations. no small animal model is currently available to study this pathogen. we report here that conventional mice orally inoculated with prototype eaec strain 042 generally became colonized, though the abundance of organisms cultured from their stool varied substantially among individual animals. in contrast, mice whose water contained 5 g/liter streptomycin consistently be ...200919349428
enteric bacterial pathogens in hiv-infected children with acute diarrhea in mulago referral and teaching hospital, kampala, uganda.hiv-infected children develop severe bacterial infections. we set out to determine the enteric bacterial pathogens in hiv-infected children and hiv-negative controls with acute diarrhea and their antimicrobial sensitivities.200919357426
preliminary foodnet data on the incidence of infection with pathogens transmitted commonly through food--10 states, 2008.foodborne diseases remain an important public health problem in the united states. the foodborne diseases active surveillance network (foodnet) of cdc's emerging infections program collects data from 10 u.s. states on diseases caused by enteric pathogens transmitted commonly through food. foodnet is an active, population-based surveillance system for these laboratory-confirmed infections. this report describes preliminary surveillance data for 2008 and trends since 1996. in 2008, the estimated i ...200919357633
virb alleviates h-ns repression of the icsp promoter in shigella flexneri from sites more than one kilobase upstream of the transcription start site.the icsp promoter of shigella spp. is repressed by h-ns and derepressed by virb. here, we show that an inverted repeat located between positions -1144 and -1130 relative to the icsp transcription start site is necessary for virb-dependent derepression. the atypical location of this cis-acting site is discussed.200919363111
potent bactericidal action of a flavonoid fraction isolated from the stem bark of butea frondosa.the flavonoid fraction isolated from the ethyl acetate fraction (bf-1) of butea frondosa (l.) stem bark exhibited distinct antimicrobial activity when tested against 129 bacterial strains belonging to 9 different genera of both gram-positive and gram-negative types. minimum inhibitory concentration (mic) of the fraction bf-1 was determined following nccls guidelines using the agar dilution method. twenty-four out of 36 strains of staphylococcus aureus were inhibited by 50-200 mg/l of the fractio ...200919368121
life on the inside: the intracellular lifestyle of cytosolic bacteria.bacterial pathogens exploit a huge range of niches within their hosts. many pathogens can invade non-phagocytic cells and survive within a membrane-bound compartment. however, only a small number of bacteria, including listeria monocytogenes, shigella flexneri, burkholderia pseudomallei, francisella tularensis and rickettsia spp., can gain access to and proliferate within the host cell cytosol. here, we discuss the mechanisms by which these cytosolic pathogens escape into the cytosol, obtain nut ...200919369949
mechanism of unusual formation of 3-(5-phenyl-3h-[1,2,4]dithiazol-3-yl)chromen-4-ones and 4-oxo-4h-chromene-3-carbothioic acid n-phenylamides and their antimicrobial evaluation.6/6,7-substituted 3-formylchromones (9a-e) react with 2 equivalents of 2-phenyl-4-dimethylamino-1-thia-3-azabuta-1,3-diene (10) or thiobenzamide (11) in refluxing toluene to furnish novel substituted 3-(5-phenyl-3h-[1,2,4]dithiazol-3-yl)chromen-4-ones (12a-e). however, reactions of substituted 2-anilino-3-formylchromones (15a-d) with thiobenzamide (11, 2 equivalents) in refluxing xylene furnish 4-oxo-4h-chromene-3-carbothioic acid n-phenylamide (17a-d) in high yields. a mechanistic rationalizati ...200919375826
intuitionistic fuzzy set vs. fuzzy set application in medical pattern recognition.one of the toughest challenges in medical diagnosis is uncertainty handling. the detection of intestinal bacteria such as salmonella and shigella which cause typhoid fever and dysentery, respectively, is one such challenging problem for microbiologists. they detect the bacteria by the comparison with predefined classes to find the most similar one. consequently, we observe uncertainty in determining the similarity degrees, and therefore, in the bacteria classification. in this paper, we take an ...200919375899
a new ethanolamine phosphate-containing variant of the o-antigen of shigella flexneri type 4a.the o-specific polysaccharide (o-antigen) structure of a shigella flexneri type 4a strain from the dysentery reference laboratory (london, uk) was elucidated in 1978 and its characteristic feature was found to be alpha-d-glucosylation of glcnac at position 6, which defines o-factor iv. our nmr spectroscopic studies of the o-specific polysaccharides of two other strains belonging to s. flexneri type 4a (g1668 from adelaide, australia, and 1359 from moscow, russia) confirmed the carbohydrate backb ...200919376498
[complete structure of the o-polysaccharide from shigella dysenteriae type 10].the structure of the o-specific polysaccharide from shigella dysenteriae type 10, which has been reported previously in bioorg. khim. (1977, vol. 3, pp. 1219-1225), was refined: [formula: see text].200919377533
activating mutations of n-wasp alter shigella pathogenesis.the pathogenesis of shigella requires binding to the host protein n-wasp. to examine the roles of structural conformation and phospho-regulation of n-wasp during shigella pathogenesis, mutant n-wasp constructs predicted to result in a constitutively open conformation (l229p and l232p) or either a phospho-mimicking (y253e) or phospho-disruptive (y253f) structure were constructed. pyrene actin assays demonstrated that the n-wasp l229p and l232p constructs are constitutively active. despite the inc ...200919379711
unc119 protects from shigella infection by inhibiting the abl family kinases.bacteria engage cell surface receptors and intracellular signaling molecules to enter the cell. unc119 is an adaptor protein, which interacts with receptors and tyrosine kinases. its role in bacterial invasion of cells is unknown.200919381274
role of azithromycin against clinical isolates of family enterobacteriaceae: a comparison of its minimum inhibitory concentration by three different methods.to determine the effect of azithromycin, a new azalide antibiotic, on clinical isolates of the family enterobacteriaceae and to determine and compare its minimum inhibitory concentration (mic) by disk diffusion, agar dilution and e-test methods.200919384031
altered expression of inflammatory cytokine receptors in response to lps challenge through interaction between intestinal epithelial cells and lymphocytes of peyer's patch.the intense innate immunological activities occurring at the enteric mucosal surface involve interactions between intestinal epithelial cells and immune cells. our previous studies have indicated that peyer's patch lymphocytes may modulate intestinal epithelial barrier and ion transport function in homeostasis and host defense via cell-cell contact as well as cytokine signaling. the present study was undertaken using the established co-culture system of caco-2 epithelial cells with lymphocytes o ...200919385035
inactivation of salmonella enteritidis in chicken breast fillets by single-cycle and multiple-cycle high pressure treatments.the effect of single-cycle and multiple-cycle high hydrostatic pressure (hhp) treatments on the survival of three salmonella enteritidis strains in chicken breast fillets was investigated. the surface of fillets was inoculated with a cocktail of three salmonella strains at approximately 10(7) colony-forming units (cfu)/g, and held at 4 degrees c for 20 hours before hhp treatments. reduction of salmonella counts on tryptic soy agar (tsa) by single-cycle treatments at 300 mpa and 12 degrees c rang ...200919388832
three-dimensional reconstruction of the shigella t3ss transmembrane regions reveals 12-fold symmetry and novel features throughout.type iii secretion systems (t3sss) mediate bacterial protein translocation into eukaryotic cells, a process essential for virulence of many gram-negative pathogens. they are composed of a cytoplasmic secretion machinery and a base that bridges both bacterial membranes, into which a hollow, external needle is embedded. when isolated, the latter two parts are termed the 'needle complex'. an incomplete understanding of the structure of the needle complex has hampered studies of t3ss function. to es ...200919396171
ectopic production of vapcs from enterobacteria inhibits translation and trans-activates yoeb mrna interferase.toxin-antitoxin loci have been identified in almost all free-living prokaryotes, often in high copy numbers. the biological function and molecular targets of the abundant vapbc loci are not yet known. here we analyse the vapbc loci of salmonella lt2 and shigella plasmid pmysh6000. both loci encode putative pin (pilt n-terminal) domain toxins, and antitoxins that may regulate vapbc transcription. we show that vapbc(lt2) and vapbc(pmysh) are bona fide ta loci: (i) both vapcs inhibited cell growth ...200919400780
antimicrobial activity of endemic digitalis lamarckii ivan from turkey.antimicrobial activity of the methanolic extracts of leaves and flowers of d. lamarckii ivan, (scophulariaceae), an endemic plant species of turkey, was tested on ten bacterial and four yeast strains. effective antibacterial activity was observed in four bacterial strains. minimum inhibitory concentration (mic) was calculated by use of liquid culture tests and in all the four effective bacterial strains, the mic was found to be > or = 199.5 mg/ml. the minimum bactericidal concentration (mbc) of ...200919405389
estimated burden of human salmonella, shigella, and brucella infections in jordan, 2003-2004.there is limited information on the disease burden due to foodborne pathogens in the eastern mediterranean region. this study estimates the burden of disease in jordan for salmonella, shigella, and brucella during 1 year.200919415972
rapidly fatal bacteremia caused by shigella sonnei without preceding gastrointestinal symptoms in an adult patient with lung cancer. 200919416029
synthesis, spectral characterization, in-vitro microbiological evaluation and cytotoxic activities of novel macrocyclic bis hydrazone.a macrocyclic hydrazone schiff base was synthesized by reacting 1,4-dicarbonyl phenyl dihydrazide with 2,6-diformyl-4-methyl phenol and a series of metal complexes with this new schiff base were synthesized by reaction with co(ii), ni(ii) and cu(ii) metal salts. the schiff base and its complexes have been characterized by elemental analyses, ir, (1)h nmr, uv-vis, fab mass, esr spectra, fluorescence, thermal, magnetic and molar conductance data. the analytical data reveal that the co(ii), ni(ii) ...200919419802
going round in circles: the structural biology of type iii secretion systems. 200919421157
determination of emitted airborne microorganisms from a bio-pak wastewater treatment plant.results of a study conducted to assess the degree of airborne microbial contamination generated by a wastewater treatment plant (wwtp) with bioreactor "bio-pak" closed treatment system and evaluation of the dispersion of potential pathogens are described. over the year aerosol samples were collected simultaneously with sedimentation and impact methods from several plant sites and the surroundings. external upwind sites were used as control. total colony-forming counts of heterotrophic psychrophi ...200919428042
design of alpha-transglucosidases of controlled specificity for programmed chemoenzymatic synthesis of antigenic oligosaccharides.combined with chemical synthesis, the use of biocatalysts holds great potential to open the way to novel molecular diversity. we report in vitro chemoenzymatic pathways that, for the first time, take advantage of enzyme engineering to produce complex microbial cell-surface oligosaccharides and circumvent the chemical boundaries of glycochemistry. glycoenzymes were designed to act on nonnatural conveniently protected substrates to produce intermediates compatible with a programmed chemical elonga ...200919432472
liposomes recruit ipac to the shigella flexneri type iii secretion apparatus needle as a final step in secretion induction.shigella flexneri contact with enterocytes induces a burst of protein secretion via its type iii secretion apparatus (ttsa) as an initial step in cellular invasion. we have previously reported that ipad is positioned at the ttsa needle tip (m. espina et al., infect. immuno. 74:4391-4400, 2006). from this position, ipad senses small molecules in the environment to control the presentation of ipab to the needle tip. this step occurs without type iii secretion induction or ipac recruitment to the s ...200919433542
the rho gtpase inactivation domain in vibrio cholerae martx toxin has a circularly permuted papain-like thiol protease fold.a rho gtpase inactivation domain (rid) has been discovered in the multifunctional, autoprocessing rtx toxin rtxa from vibrio cholerae. the rid domain causes actin depolymerization and rounding of host cells through inactivation of the small rho gtpases rho, rac, and cdc42. with only a few toxin proteins containing rid domains in the current sequence database, the structure and molecular mechanisms of this domain are unknown. using comparative sequence and structural analyses, we report homology ...200919434753
go4genome: a prokaryotic phylogeny based on genome organization.determining the phylogeny of closely related prokaryotes may fail in an analysis of rrna or a small set of sequences. whole-genome phylogeny utilizes the maximally available sample space. for a precise determination of genome similarity, two aspects have to be considered when developing an algorithm of whole-genome phylogeny: (1) gene order conservation is a more precise signal than gene content; and (2) when using sequence similarity, failures in identifying orthologues or the in situ replaceme ...200919436929
determination of foodborne pathogenic bacteria by multiplex pcr-microchip capillary electrophoresis with genetic algorithm-support vector regression optimization.a rapid and sensitive method based on microchip capillary electrophoresis with condition optimization of genetic algorithm-support vector regression (ga-svr) was developed and applied to simultaneous analysis of multiplex pcr products of four foodborne pathogenic bacteria. four pairs of oligonucleotide primers were designed to exclusively amplify the targeted gene of vibrio parahemolyticus, salmonella, escherichia coli (e. coli) o157:h7, shigella and the quadruplex pcr parameters were optimized. ...200919446070
genetics and virulence association of the shigella flexneri sit iron transport system.the sit-encoded iron transport system is present within pathogenicity islands in all shigella spp. and some pathogenic escherichia coli strains. the islands contain numerous insertion elements and sequences with homology to bacteriophage genes. the shigella flexneri sit genes can be lost as a result of deletion within the island. the formation of deletions was dependent upon reca and occurred at relatively high frequency. this suggests that the sit region is inherently unstable, yet sit genes ar ...200919289511
acute non-outbreak shigellosis: ten years experience in southern taiwan.we conducted a retrospective study of both the clinical and laboratory characteristics of shigellosis in southern taiwan.200919292940
the changing panorama of bacterial enteric infections.we studied the age-specific population-based incidence of bacterial enteric infections caused by shigella, salmonella and campylobacter, in jerusalem. during 1990-2008, 32,408 cases were reported (incidence rate 232.1/100,000 per annum). the patterns of shigella (47.4% of cases), salmonella (34.4%) and campylobacter (18.2%) infections evolved noticeably. campylobacter rates increased from 15.0 to 110.8/100,000 per annum. salmonella rates increased from 74.2 to 199.6/100,000 in 1995 then decrease ...200919296872
characterization of fluoroquinolone-resistant shigella flexneri in hangzhou area of china.the aim of this study was to characterize fluoroquinolone-resistant shigella and determine whether the qnr and aac(6')-ib-cr genes could contribute to sporadic shigellosis at the clinic in the hangzhou area of china.200919297378
serodiversity and antimicrobial resistance pattern of shigella isolates at gondar university teaching hospital, northwest ethiopia.the aims of this study were to determine the distribution of serogroups and serotypes as well as the antimicrobial resistance pattern of shigella isolates from gondar patients with acute diarrhea. a cross-sectional study was conducted from august 2006 to february 2008. stool specimens were received from study subjects and cultured. isolates were confirmed by biochemical and serological tests. the isolates were tested for antimicrobial susceptibility by the disc diffusion method. of the 1,200 sto ...200919305047
green banana reduces clinical severity of childhood shigellosis: a double-blind, randomized, controlled clinical trial.mature green banana (gb) fruit is rich in amylase-resistant starch that stimulates colonic production of short-chain fatty acids (referred to as fatty acid) and is useful in treating diarrheal diseases. we studied therapeutic effects of gb in childhood shigellosis by determining colonic fatty acid production in a double-blind, randomized, controlled, clinical trial.200919319017
structure and heme binding properties of escherichia coli o157:h7 chux.for many pathogenic microorganisms, iron acquisition from host heme sources stimulates growth, multiplication, ultimately enabling successful survival and colonization. in gram-negative escherichia coli o157:h7, shigella dysenteriae and yersinia enterocolitica the genes encoded within the heme utilization operon enable the effective uptake and utilization of heme as an iron source. while the complement of proteins responsible for heme internalization has been determined in these organisms, the f ...200919319934
surveillance of antibiotic susceptibility patterns among shigella sonnei strains isolated in belgium during the 18-year period 1990 to 2007.this study was conducted to determine the frequency and pattern of antimicrobial susceptibility of shigella sonnei, the predominant species causing shigellosis in belgium. between 1990 and 2007, a total of 7,307 strains, mainly (98.2%) isolated from stools, were diagnosed by peripheral laboratories before being confirmed as shigella strains by serotyping by the national reference center of salmonella and shigella. a significant increase in resistances to tetracycline, streptomycin, trimethoprim, ...200919321731
the clinical course of postinfectious irritable bowel syndrome: a five-year follow-up study.irritable bowel syndrome (ibs) is a common disorder seen in general practice. bacterial gastroenteritis has been known to be a risk factor for ibs. we investigated the clinical course, risk factors, and prognosis of postinfectious ibs (pi-ibs) 5 years after shigella infection.200919262407
the mere protein encoded by transposon tn21 is a broad mercury transporter in escherichia coli.in order to clarify the physiological role of the mere gene of transposon tn21, a pe4 plasmid that contained the merr gene of plasmid pmr26 from pseudomonas strain k-62, and the mere gene of tn21 from the shigella flexneri plasmid nr1 (r100) was constructed. bacteria with plasmid pe4 (merr-o/p-mere) were more hypersensitive to ch(3)hg(i) and hg(ii), and took up significantly more ch(3)hg(i) and hg(ii), than the isogenic strain. the mere protein encoded by pe4 was localized in the membrane cell f ...200919265693
piscidin 4, a novel member of the piscidin family of antimicrobial peptides.piscidins are linear, amphipathic, antimicrobial peptides (amps) with broad, potent, activity spectrum. piscidins and other members of the piscidin family appear to comprise the most common group of amps in teleost fish. all piscidins and related members of the piscidin family described to date are 18-26 amino acids long.we report here the isolation of a novel 5329.25 da, 44-residue (ffrhlfrgakaifrgarqgxrahkvvsryrnrdvpetdnnqeep) antimicrobial peptide from hybrid striped bass (morone chrysops fem ...200919266617
high-let ion radiolysis of water: oxygen production in tracks.it is known that molecular oxygen is a product of the radiolysis of water with high-linear energy transfer (let) radiation, a result that is of particular significance in radiobiology and of practical relevance in radiotherapy. in fact, it has been suggested that the radiolytic formation of an oxygenated microenvironment around the tracks of high-let heavy ions is an important factor in their enhanced biological efficiency in the sense that this may be due to an "oxygen effect" by o(2) produced ...200919267566
the effects of the bacterial interaction with visible-light responsive titania photocatalyst on the bactericidal performance.bactericidal activity of traditional titanium dioxide (tio2) photocatalyst is effective only upon irradiation by ultraviolet light, which restricts the potential applications of tio2 for use in our living environments. recently carbon-containing tio2 was found to be photoactive at visible-light illumination that affords the potential to overcome this problem; although, the bactericidal activity of these photocatalysts is relatively lower than conventional disinfectants. evidenced from scanning e ...200919272171
characterisation of early mucosal and neuronal lesions following shigella flexneri infection in human colon.shigella, an enteroinvasive bacteria induces a major inflammatory response responsible for acute rectocolitis in humans. however, early effect of shigella flexneri (s. flexneri) infection upon the human mucosa and its microenvironement, in particular the enteric nervous system, remains currently unknown. therefore, in this study, we sought to characterize ex vivo the early events of shigellosis in a model of human colonic explants. in particular, we aimed at identifying factors produced by s. fl ...200919274103
efficient synthesis of six tri- to hexasaccharide fragments of shigella flexneri serotypes 3a and/or x o-antigen, including a study on acceptors containing n-trichloroacetylglucosamine versus n-acetylglucosamine.six tri- to hexasaccharide fragments of the {2)-[alpha-d-glcp-(1-->3)]-alpha-l-rhap-(1-->2)-alpha-l-rhap-(1-->3)-[ac-->2]-alpha-l-rhap-(1-->3)-beta-d-glcpnac-(1-->}(n) polymer ([(e)ab(ac)cd](n)) were synthesized as their propyl glycosides. all targets share the (e)ab sequence. following a thorough investigation on the use of n-trichloroacetylglucosamine- versus n-acetylglucosamine-containing tri- and tetrasaccharide acceptors, the successful strategy was based on an efficient combination of the ...200919278208
foodborne outbreaks, austria 2007.in 2007 austria reported a total of 438 foodborne outbreaks affecting 1715 people, including 286 hospitalized patients and one death. salmonella spp. and campylobacter spp. accounted for 95% of all reported outbreaks. forty-eight (11%) of the 438 austrian outbreaks were acquired abroad. of the 390 domestically acquired foodborne outbreaks, bacterial infection caused 376, viruses (norovirus and 1-time hepatitis a virus) caused 11, and intoxications (staphylococcus aureus enterotoxins, alkaloid to ...200919280130
a food-borne outbreak of shigella sonnei gastroenteritis, austria, 2008.we report on the first foodborne outbreak of shigella sonnei described in austria. on july 14 2008, ages was informed of a cluster of 22 laboratory-confirmed cases of infection with s. sonnei restricted to public health district x in the province of salzburg. all cases had attended a youth-group trip to a small village in the province of tyrol from july 7 to july 9. an outbreak case among the trip participants was a person who (1) attended the trip and (2) fell ill with diarrhea in the period be ...200919280143
tri-county comprehensive assessment of risk factors for sporadic reportable bacterial enteric infection in children.the aim of this study was to determine risk factors for childhood sporadic reportable enteric infection (rei) caused by bacteria, specifically campylobacter, salmonella, escherichia coli o157, or shigella (rei-b).200919281302
application of a multiplex pcr assay for the detection of shigella, escherichia coli and shiga toxin-producing esch. coli in milk.a multiplex pcr (mpcr) assay using previously known genetic markers of shigella, escherichia coli and shiga-toxic esch. coli was standardized. uida gene was targeted for the common detection of esch. coli and shigella, whereas ipah and stx1 genes were used as markers for the detection of shigella and shiga-toxin producing strains, respectively. the standardized assays detected the target organism specifically and selectively. the mpcr developed by combining all the three reactions generated spec ...200919281632
antimicrobial activity of the methanolic extract and compounds from morus mesozygia stem bark.this study was aimed at investigating the antimicrobial activity of the methanolic extract (mmb) and compounds isolated from the stem bark of morus mesozygia, namely 3beta-acetoxyurs-12-en-11-one (1), moracin q (2), moracin t (3), artocarpesin (4), cycloartocarpesin (5), moracin r (6), moracin u (8), moracin c (9), and moracin m (10).200919450674
diagnosis and treatment of acute or persistent diarrhea.studies of microbial pathogens and the toxins they produce are important for determining the mechanisms by which they cause disease and spread throughout a population. some bacteria produce secretory enterotoxins (such as cholera toxin or the heat-labile or stable enterotoxins produced by escherichia coli) that invade cells directly. others invade cells or produce cytotoxins (such as those produced by shigella, enteroinvasive e coli, or clostridium difficile) that damage cells or trigger host re ...200919457416
molecular typing methodologies for microbial source tracking and epidemiological investigations of gram-negative bacterial foodborne pathogens.gram-negative bacterial foodborne pathogens are a worldwide cause of morbidity and mortality. the ability to carry out epidemiological investigations to determine the primary sources of bacterial contamination is important to improve public health. multiple methods are available for bacterial source tracking and to determine the distribution of pathogens isolated from sick patients. the molecular based typing methods available fall into three general categories: those based on restriction analys ...200919460308
metabolic control through ornithine and uracil of epithelial cell invasion by shigella flexneri.this paper shows that compounds in defined growth media strongly influence the expression of the effectors of virulence in the human invasive pathogen shigella flexneri. ornithine in conjunction with uracil reduces the haemolytic ability of wild-type cultures more than 20-fold and the expression of the type iii secretion system more than 8-fold, as monitored by an mxic : : lacz transcriptional reporter. mxic gene expression is further decreased by the presence of methionine or branched-chain ami ...200919460819
design, synthesis, and immunochemical characterization of a chimeric glycopeptide corresponding to the shigella flexneri y o-polysaccharide and its peptide mimic mdwnmhaa.two glycopeptide chimeras corresponding to the shigella flexneri y o-polysaccharide and its peptide mimic were designed in an attempt to improve the binding affinity by increasing the entropy of binding relative to the original octapeptide mimic of the o-polysaccharide. the design was based on the x-ray crystal structures of a monoclonal antibody sya/j6 in complex with its cognate ligands, a pentasaccharide corresponding to the s. flexneri y o-polysaccharide and the octapeptide mimic, mdwnmhaa. ...200919467535
rapid detection of intestinal pathogens in fecal samples by an improved reverse dot blot method.to develop a new, rapid and accurate reverse dot blot (rdb) method for the detection of intestinal pathogens in fecal samples.200919469006
incidence of multiple antibiotic resistant gram-negative bacteria isolated from surface and underground water sources in south western region of nigeria.in most rural and urban settlements, particularly in nigeria, wells, spring, streams or rivers and lakes serves as major sources of water supply for drinking and other domestic purposes. unfortunately, many of the available water sources are not potable without some form of treatment which is seldom available in most settings. the use of untreated surface water sources for drinking and for domestic purposes remains a major threat to public health as these could serve as reservoirs the for transf ...200919474486
Displaying items 12801 - 12900 of 13650