Publications
| Title | Abstract | Year(sorted ascending) Filter | PMID Filter |
|---|
| single residue determines the specificity of neutrophil elastase for shigella virulence factors. | human neutrophil elastase (ne) is a key host defense protease that cleaves virulence factors of gram-negative bacteria. ne and cathepsin g (cg) are chymotrypsin-like serine proteases with sequence and structural similarities, and both are abundant in neutrophil granules. unlike ne, cg does not cleave virulence factors of enteric bacteria. through structure-function analysis, we identified regions in ne that are essential for cleaving shigella virulence proteins. ne residues at eight different po ... | 2008 | 18295791 |
| geographic analysis of shigellosis in vietnam. | geographic and ecological analysis may provide investigators useful ecological information for the control of shigellosis. this paper provides distribution of individual shigella species in space, and ecological covariates for shigellosis in nha trang, vietnam. data on shigellosis in neighborhoods were used to identify ecological covariates. a bayesian hierarchical model was used to obtain joint posterior distribution of model parameters and to construct smoothed risk maps for shigellosis. neigh ... | 2008 | 18296100 |
| socioeconomic risk factors for bacterial gastrointestinal infections. | bacterial gastrointestinal infections cause considerable morbidity in industrialized countries, but little is known about socioeconomic factors affecting the risk of infection. | 2008 | 18300694 |
| a five-year antimicrobial resistance pattern of shigella isolated from stools in the gondar university hospital, northwest ethiopia. | shigellosis is a global health problem. however, developing countries, where there is poor hygiene and unsafe water supplies, are especially affected. in the last two decades shigella isolates have become increasingly resistant to many commonly used drugs. we investigated the antibiotic susceptibility pattern of shigella isolated from stool specimens processed over five years in the bacteriology laboratory of the university of gondar teaching hospital in northwest ethiopia. stool specimens were ... | 2008 | 18302868 |
| structures of the shigella flexneri type 3 secretion system protein mxic reveal conformational variability amongst homologues. | many gram-negative pathogenic bacteria use a complex macromolecular machine, known as the type 3 secretion system (t3ss), to transfer virulence proteins into host cells. the t3ss is composed of a cytoplasmic bulb, a basal body spanning the inner and outer bacterial membranes, and an extracellular needle. secretion is regulated by both cytoplasmic and inner membrane proteins that must respond to specific signals in order to ensure that virulence proteins are not secreted before contact with a euk ... | 2008 | 18304577 |
| the o-polysaccharide of escherichia coli o112ac has the same structure as that of shigella dysenteriae type 2 but is devoid of o-acetylation: a revision of the s. dysenteriae type 2 o-polysaccharide structure. | the o-antigen structure of shigella dysenteriae type 2 was reinvestigated using chemical modifications along with high-resolution 2d (1)h and (13)c nmr spectroscopy. the o-antigen was found to contain a pyruvic acid acetal, which was overlooked in an early study, and the following revised structure of the pentasaccharide repeating unit was established: where approximately 70% glcnac residues bear an o-acetyl group at position 3. the o-antigen of escherichia coli o112ac was found to have the same ... | 2008 | 18308298 |
| nlrx1: friend or foe? | 2008 | 18311173 | |
| ipgb1 and ipgb2, two homologous effectors secreted via the mxi-spa type iii secretion apparatus, cooperate to mediate polarized cell invasion and inflammatory potential of shigella flexenri. | type iii secretion systems (t3ss) are present in many pathogenic gram-negative bacteria and mediate the translocation of bacterial effector proteins into host cells. here, we report the phenotypic characterization of s. flexneri ipgb1 and ipgb2 mutants, in which the genes encoding the ipgb1 and ipgb2 effectors have been inactivated, either independently or simultaneously. like ipgb1, we found that ipgb2 is secreted by the t3ss and its secretion requires the spa15 chaperone. upon infection of sem ... | 2008 | 18316224 |
| analysis of bacterial dna in synovial tissue of tunisian patients with reactive and undifferentiated arthritis by broad-range pcr, cloning and sequencing. | bacteria and/or their antigens have been implicated in the pathogenesis of reactive arthritis (rea). several studies have reported the presence of bacterial antigens and nucleic acids of bacteria other than those specified by diagnostic criteria for rea in joint specimens from patients with rea and various arthritides. the present study was conducted to detect any bacterial dna and identify bacterial species that are present in the synovial tissue of tunisian patients with reactive arthritis and ... | 2008 | 18412942 |
| containment of tumor-colonizing bacteria by host neutrophils. | administration of facultative anaerobic bacteria like salmonella typhimurium, shigella flexneri, and escherichia coli to tumor-bearing mice leads to a preferential accumulation and proliferation of the microorganisms within the solid tumor. until now, all known tumor-targeting bacteria have shown poor dissemination inside the tumors. they accumulate almost exclusively in large necrotic areas and spare a rim of viable tumor cells. interestingly, the bacteria-containing necrotic region is separate ... | 2008 | 18413765 |
| development of a travelers' diarrhea vaccine for the military: how much is an ounce of prevention really worth? | infectious diarrhea is one of the many threats to the deployed military, and given limited resources, a decision to pursue a vaccine acquisition strategy should be based on best evidence that weighs costs and benefits compared to alternatives. an economic model was developed to estimate the marginal cost to avert a duty day lost due to diarrhea for a vaccine acquisition strategy compared to current clinical management, for both multiplex and pathogen-specific vaccines. vaccines against campyloba ... | 2008 | 18417259 |
| preliminary foodnet data on the incidence of infection with pathogens transmitted commonly through food--10 states, 2007. | the foodborne diseases active surveillance network (foodnet) of cdc's emerging infections program collects data from 10 u.s. states regarding diseases caused by pathogens commonly transmitted through food. foodnet quantifies and monitors the incidence of these infections by conducting active, population-based surveillance for laboratory-confirmed infections. this report describes preliminary surveillance data for 2007 and compares them with data for previous years. in 2007, the estimated inciden ... | 2008 | 18401330 |
| characterisation of escherichia coli strains involved in transcytosis across gut epithelial cells exposed to metabolic and inflammatory stress. | translocation of normally non-pathogenic bacteria across the gut may drive inflammatory responses associated with sepsis and inflammatory bowel disease. recent evidence suggests translocation may not be purely passive, but occurs via novel transcellular pathways activated in enterocytes by inflammatory and metabolic stress. the specificity of this pathway with respect to different e. coli strains and other bacterial species, and possible molecular determinants of the "translocating" phenotype ha ... | 2008 | 18403240 |
| the emergence and fate of horizontally acquired genes in escherichia coli. | bacterial species, and even strains within species, can vary greatly in their gene contents and metabolic capabilities. we examine the evolution of this diversity by assessing the distribution and ancestry of each gene in 13 sequenced isolates of escherichia coli and shigella. we focus on the emergence and demise of two specific classes of genes, orfans (genes with no homologs in present databases) and hops (genes with distant homologs), since these genes, in contrast to most conserved ancestral ... | 2008 | 18404206 |
| insecticidal properties and microbial contaminants in a spodoptera exigua multiple nucleopolyhedrovirus (baculoviridae) formulation stored at different temperatures. | the spodoptera exigua (hübner) multiple nucleopolyhedrovirus (semnpv) is currently being tested as a biological insecticide for use in greenhouse crops in southern spain. we performed a study in which semipurified semnpv occlusion bodies (obs) were formulated in phosphate-buffered saline, ph 6.5, with 5% (vol:vol) glycerol and 0.15% (wt:vol) sorbic acid, and they were stored at -20, 4, or 25 degrees c during 18 mo. initial aerobic counts (+/-se) averaged 1.4 (+/-0.17) x 10(7) colony-forming unit ... | 2008 | 18330114 |
| subversion of actin dynamics by espm effectors of attaching and effacing bacterial pathogens. | rho gtpases are common targets of bacterial toxins and type iii secretion system effectors. ipgb1 and ipgb2 of shigella and map of enteropathogenic (epec) and enterohemorrhagic (ehec) escherichia coli were recently grouped together on the basis that they share a conserved wxxxe motif. in this study, we characterized six wxxxe effectors from attaching and effacing pathogens: trca and espm1 of epec strain b171, espm1 and espm2 of ehec strain sakai and espm2 and espm3 of citrobacter rodentium. we s ... | 2008 | 18331467 |
| prevalence of gastrointestinal bacterial pathogens in a population of zoo animals. | faecal prevalence of gastrointestinal bacterial pathogens, including campylobacter, escherichia coli o157:h7, salmonella, shigella, yersinia, as well as arcobacter, were examined in 317 faecal specimens from 44 animal species in belfast zoological gardens, during july-september 2006. thermophilic campylobacters including campylobacter jejuni, campylobacter coli and campylobacter lari, were the most frequently isolated pathogens, where members of this genus were isolated from 11 animal species (1 ... | 2008 | 18331520 |
| a pharmacokinetic study of enrofloxacin and its active metabolite ciprofloxacin after oral and intramuscular dosing of enrofloxacin in rhesus monkeys (macaca mulatta). | enrofloxacin is used for treating shigellosis in non-human primates; however, there are no reports describing its pharmacokinetics in rhesus monkeys. pharmacokinetic data in intended target species (rhesus) help to determine the proper dose regimen. blood levels of enrofloxacin and ciprofloxacin (enrofloxacin's active metabolite), were determined after either intramuscular or oral dosing of enrofloxacin for 7 days in a cross-over study. levels of both antibiotics were determined by solid phase e ... | 2008 | 18384536 |
| antimicrobial activity of 2,5-dihydroxy-3-methyl-1,4-benzoquinone from embelia schimperi. | chromatographic separation of an ethyl acetate extract from embelia schimperi led to the isolation of a new compound identified as 2,5-dihydroxy-3-methyl-1,4-benzoquinone (1) on the basis of spectroscopic and physical data. the plant's crude extract and pure compound 1 were assayed for in vitro antimicrobial activity against clinical strains of salmonella spp., proteus spp., pseudomonas aeruginosa, klebsiella pneumoniae, escherichia coli, cryptococcus neoformans, shigella dysentriae and staphylo ... | 2008 | 18386487 |
| a cost function analysis of shigellosis in thailand. | the purpose of this study was to develop a cost function model to estimate the public treatment cost of shigellosis patients in thailand. | 2008 | 18387071 |
| human-derived probiotic lactobacillus reuteri demonstrate antimicrobial activities targeting diverse enteric bacterial pathogens. | lactobacillus reuteri is a commensal-derived anaerobic probiotic that resides in the human gastrointestinal tract. l. reuteri converts glycerol into a potent broad-spectrum antimicrobial compound, reuterin, which inhibits the growth of gram-positive and gram-negative bacteria. in this study, we compared four human-derived l. reuteri isolates (atcc 55730, atcc pta 6475, atcc pta 4659 and atcc pta 5289) in their ability to produce reuterin and to inhibit the growth of different enteric pathogens i ... | 2008 | 18396068 |
| structure and genetics of shigella o antigens. | this review covers the o antigens of the 46 serotypes of shigella, but those of most shigella flexneri are variants of one basic structure, leaving 34 shigella distinct o antigens to review, together with their gene clusters. several of the structures and gene clusters are reported for the first time and this is the first such group for which structures and dna sequences have been determined for all o antigens. shigella strains are in effect escherichia coli with a specific mode of pathogenicity ... | 2008 | 18422615 |
| role of rna polymerase sigma-factor (rpos) in induction of glutamate-dependent acid-resistance of escherichia albertii under anaerobic conditions. | escherichia albertii is a potential enteric food-borne pathogen with poorly defined genetic and biochemical properties. acid resistance is perceived to be an important property of enteric pathogens, enabling them to survive passage through stomach acidity so that they may colonize the mammalian gastrointestinal tract. we analyzed glutamate-dependent acid-resistance pathway (gdar) in five e. albertii strains that have been identified so far. we observed that the strains were unable to induce gdar ... | 2008 | 18422618 |
| comparing the antimicrobial effectiveness of nacl and kcl with a view to salt/sodium replacement. | a study using a small range of pathogenic bacterial species (aeromonas hydrophila, enterobacter sakazakii, shigella flexneri, yersinia enterocolitica and 3 strains of staphylococcus aureus) has shown that potassium chloride has an equivalent antimicrobial effect on these organisms when calculated on a molar basis. combined nacl and kcl experiments were carried out and data was analysed using a modification to the lambert and lambert [lambert, r.j.w., and lambert, r., 2003. a model for the effica ... | 2008 | 18423764 |
| virulent shigella flexneri subverts the host innate immune response through manipulation of antimicrobial peptide gene expression. | antimicrobial factors are efficient defense components of the innate immunity, playing a crucial role in the intestinal homeostasis and protection against pathogens. in this study, we report that upon infection of polarized human intestinal cells in vitro, virulent shigella flexneri suppress transcription of several genes encoding antimicrobial cationic peptides, particularly the human beta-defensin hbd-3, which we show to be especially active against s. flexneri. this is an example of targeted ... | 2008 | 18426984 |
| ctx-m-15-producing shigella sonnei strain from a czech patient who traveled in asia. | 2008 | 18434554 | |
| alternative hand contamination technique to compare the activities of antimicrobial and nonantimicrobial soaps under different test conditions. | antimicrobial hand soaps provide a greater bacterial reduction than nonantimicrobial soaps. however, the link between greater bacterial reduction and a reduction of disease has not been definitively demonstrated. confounding factors, such as compliance, soap volume, and wash time, may all influence the outcomes of studies. the aim of this work was to examine the effects of wash time and soap volume on the relative activities and the subsequent transfer of bacteria to inanimate objects for antimi ... | 2008 | 18441107 |
| nonbloody, red stools from coadministration of cefdinir and iron-supplemented infant formulas. | cefdinir is an extended-spectrum, third-generation cephalosporin that may be used for treatment of acute otitis media in patients allergic to penicillin. when administered with iron-containing products, including infant formulas, cefdinir or one of its metabolites may bind to ferric ions, forming a nonabsorbable complex that imparts a reddish color to the stool. we describe a 9-month-old infant with failure to thrive and acute otitis media who developed an erythematous maculopapular rash during ... | 2008 | 18447664 |
| shigellosis: the current status of vaccine development. | shigellosis, a major form of bacillary dysentery, is caused by infection with shigella organisms. in poor countries, shigella-caused dysentery is endemic and causes an estimated 163 million illness episodes annually and more than one million deaths. although several strategies have been used to develop vaccines targeting shigellosis, none has been licensed for use outside china. owing to the wide range of shigella serotypes and subtypes, there is a need for a multivalent vaccine representing pre ... | 2008 | 18448978 |
| deoxycholate interacts with ipad of shigella flexneri in inducing the recruitment of ipab to the type iii secretion apparatus needle tip. | type iii secretion (tts) is an essential virulence function for shigella flexneri that delivers effector proteins that are responsible for bacterial invasion of intestinal epithelial cells. the shigella tts apparatus (ttsa) consists of a basal body that spans the bacterial inner and outer membranes and a needle exposed at the pathogen surface. at the distal end of the needle is a "tip complex" composed of invasion plasmid antigen d (ipad). ipad not only regulates tts, but is required for the rec ... | 2008 | 18450744 |
| a global modulatory role for the yersinia enterocolitica h-ns protein. | the h-ns protein plays a significant role in the modulation of gene expression in gram-negative bacteria. whereas isolation and characterization of hns mutants in escherichia coli, salmonella and shigella represented critical steps to gain insight into the modulatory role of h-ns, it has hitherto not been possible to isolate hns mutants in yersinia. the hns mutation is considered to be deleterious in this genus. to study the modulatory role of h-ns in yersinia we circumvented hns lethality by ex ... | 2008 | 18451036 |
| mutagenesis of the shigella flexneri autotransporter icsa reveals novel functional regions involved in icsa biogenesis and recruitment of host neural wiscott-aldrich syndrome protein. | the icsa (virg) protein of shigella flexneri is a polarly localized, outer membrane protein that is essential for virulence. within host cells, icsa activates the host actin regulatory protein, neural wiskott-aldrich syndrome protein (n-wasp), which in turn recruits the arp2/3 complex, which nucleates host actin to form f-actin comet tails and initiate bacterial motility. linker insertion mutagenesis was undertaken to randomly introduce 5-amino-acid in-frame insertions within icsa. forty-seven l ... | 2008 | 18456802 |
| what's the point of the type iii secretion system needle? | recent work by several groups has significantly expanded our knowledge of the structure, regulation of assembly, and function of components of the extracellular portion of the type iii secretion system (t3ss) of gram-negative bacteria. this perspective presents a structure-informed analysis of functional data and discusses three nonmutually exclusive models of how a key aspect of t3ss biology, the sensing of host cells, may be performed. | 2008 | 18458349 |
| global epidemiology of infections due to shigella, salmonella serotype typhi, and enterotoxigenic escherichia coli. | 2008 | 18461719 | |
| an intersubunit active site between supercoiled parallel beta helices in the trimeric tailspike endorhamnosidase of shigella flexneri phage sf6. | sf6 belongs to the podoviridae family of temperate bacteriophages that infect gram-negative bacteria by insertion of their double-stranded dna. they attach to their hosts specifically via their tailspike proteins. the 1.25 a crystal structure of shigella phage sf6 tailspike protein (sf6 tsp) reveals a conserved architecture with a central, right-handed beta helix. in the trimer of sf6 tsp, the parallel beta helices form a left-handed, coiled-beta coil with a pitch of 340 a. the c-terminal domain ... | 2008 | 18462681 |
| immunological evidence for functional rather than structural mimicry by a shigella flexneri y polysaccharide-mimetic peptide. | an approach to vaccine design is the use of molecules that mimic the immunogenic element of interest. in this context, the interaction of mdwnmhaa, a peptide mimic of the shigella flexneri y o polysaccharide (ps), with an anti-carbohydrate monoclonal antibody, as studied previously by x-ray crystallography, suggested the presence of functional rather than structural mimicry and a bound peptide conformation that was not represented significantly in the free-ligand ensemble. the antibody response ... | 2008 | 18463226 |
| simple sequence repeats in different genome sequences of shigella and comparison with high gc and at-rich genomes. | simple sequence repeats (ssrs) are omnipresent in prokaryotes and eukaryotes, and are found anywhere in the genome in both protein encoding and noncoding regions. in present study the whole genome sequences of seven chromosomes (shigella flexneri 2a str301 and 2457t, shigella sonnei, escherichia coli k12, mycobacterium tuberculosis, mycobacterium leprae and staphylococcus saprophyticus) have downloaded from the genbank database for identifying abundance, distribution and composition of ssrs and ... | 2008 | 18464038 |
| increased isolation and characterization of shigella sonnei obtained from hospitalized children in tehran, iran. | shigella flexneri has been the most frequent cause of shigellosis in children in iran. to evaluate the changes in frequency of serogroups, 302 shigella species were isolated in 2003 from hospitalized children, aged less than 12 years, with acute diarrhoea in tehran, iran. the number of collected s. sonnei, s. flexneri, s. boydii, and s. dysenteriae isolates was 178 (58.9%), 110 (37.4%), 10 (3.3%), and 4 (1.3%) respectively. most (94%) s. sonnei isolates were resistant to co-trimoxazole. they wer ... | 2008 | 19069621 |
| prevalence of bacteria and intestinal parasites among food-handlers in gondar town, northwest ethiopia. | food-handlers with poor personal hygiene working in food-service establishments could be potential sources of infection due to pathogenic organisms. the study was undertaken to determine the prevalence of bacteria and intestinal parasites among 127 food-handlers working in the cafeterias of the university of gondar and the gondar teachers training college, gondar, ethiopia. fingernail contents of both the hands and stool specimens were collected from all the 127 food-handlers. the samples were e ... | 2008 | 19069624 |
| prevalence of shigella serogroups and their antimicrobial resistance patterns in southern trinidad. | the serogroup distribution and antimicrobial susceptibility patterns of shigella isolates obtained from stool specimens of persons with acute diarrhoea in community-based studies from southern trinidad during 1997-2006 were reviewed. of the 5,187 stool specimens, 392 (8%) were positive for shigella organisms. from these 392 isolates, 88.8% were recovered from children aged >0-10 year(s). shigella sonnei was the most frequently-isolated serogroup (75%), followed by s. flexneri (19%), s. boydii (4 ... | 2008 | 19069625 |
| characterization of shigella spp. by antimicrobial resistance and pcr detection of ipa genes in an infantile population from porto velho (western amazon region), brazil. | the incidence of shigella spp. was assessed in 877 infants from the public hospital in rondônia (western amazon region, brazil) where shigella represents the fourth cause of diarrhea. twenty-five isolates were identified: 18 were shigella flexneri, three shigella sonnei, three shigella boydii and one shigella dysenteriae. with the exception of s. dysenteriae, all shigella spp. isolated from children with diarrhea acquired multiple antibiotic resistances. pcr detection of ipa virulence genes and ... | 2008 | 19057826 |
| is escherichia coli o157:h7 a common pathogen in children with bloody diarrhea in shiraz, iran? | escherichia coli (e. coli) o157:h7 is a common cause of bloody diarrhea in developed countries. the aim of this study was to determine whether e. coli o157:h7 is a possible pathogen of bloody diarrhea in southern iran. out of 719 children with diarrhea, 243 (34%) patients with positive occult blood took part in our study. the polyclonal antibody test and polymerase chain reaction (pcr) were used to identify e. coli o157:h7. stool cultures showed enteropathogens in 107 patients (44%). shigella (3 ... | 2008 | 19014048 |
| spa32 interaction with the inner-membrane spa40 component of the type iii secretion system of shigella flexneri is required for the control of the needle length by a molecular tape measure mechanism. | the effectors of enterocyte invasion by shigella are dependent on a type iii secretion system that contains a needle whose length average does not exceed 50 nm. previously, we reported that spa32 is required for needle length control as well as to switch substrate specificity from mxih to ipa proteins secretion. to identify functional domains of spa32, 11 truncated variants were constructed and analysed for their capacity (i) to control the needle's length; (ii) to secrete the ipa proteins; and ... | 2008 | 19019157 |
| the acrab-tolc pump is involved in multidrug resistance in clinical shigella flexneri isolates. | the two multiple-antibiotic resistance (mar) phenotypes (n = 8, respectively) and susceptible isolates (n = 4) of shigella flexneri from china were characterized involving the efflux pump acrab-tolc. the accumulation of ciprofloxacin, acrab-tolc pcr, and levels of mrna with northern blots were performed in three groups. sequencing of acrab-tolc was performed in selected isolates. an efflux inhibition was performed with phe-arg-beta-naphthylamide. the accumulation of ciprofloxacin at steady state ... | 2008 | 19035770 |
| a pilot sheds light on secretin assembly. | 2008 | 18940600 | |
| structural characterization of the type-iii pilot-secretin complex from shigella flexneri. | assembly of the type-iii secretion apparatus, which translocates proteins through both membranes of gram-negative bacterial pathogens into host cells, requires the formation of an integral outer-membrane secretin ring. typically, a small lipidated pilot protein is necessary for the stabilization and localization of this ring. using nmr spectroscopy, we demonstrate that the c-terminal residues 553-570 of the shigella flexneri secretin mxid encompass the minimal binding domain for its cognate pilo ... | 2008 | 18940609 |
| antimicrobial activity of endemic crataegus tanacetifolia (lam.) pers and observation of the inhibition effect on bacterial cells. | up to now an increasing number of antibiotic-resistant bacteria have been reported and thus new natural therapeutic agents are needed in order to eradicate these pathogens. through the discovery of plants such as crataegus tanacetifolia (lam.) pers that have antimicrobial activity, it will be possible to discover new natural drugs serving as chemotherapeutic agents for the treatment of nosocomial pathogens and take these antibiotic-resistant bacteria under control. the objective of the present s ... | 2008 | 18946875 |
| detection of protozoan and bacterial pathogens of public health importance in faeces of corvus spp. (large-billed crow). | parasites and bacteria are reported in the faeces of birds in the current study. fresh faecal samples of the large-billed crow (corvus spp.) were collected from the study site at bangsar, an urban setting in kuala lumpur, malaysia. these samples were transported to laboratory and analysed for parasites and bacteria. pre-prepared xld agar plates were used for culturing the bacteria in the laboratory. using the api 20etm test strips, 9 different species of bacteria were identified belonging to the ... | 2008 | 18948884 |
| analysis of immune responses and serological cross reactivities among vibrio cholerae o1, shigella flexneri 2a and haemophilus influenzae b. | antigenic determinants expressed on the bacterial cell surface are of importance in the serological characterization and microbiological diagnosis. the bacterial strains carrying these identical or similar antigenic epitopes might react with antibodies produced against other strains. in this study, strong immunogenicity and antigenic cross reactivity were demonstrated among v. cholerae o1, s. flexnerii 2a and h. influenzae b surface components. the enzyme linked immunosorbent assay (elisa) resul ... | 2008 | 18954564 |
| the elucidation of the structure of the core part of the lps from plesiomonas shigelloides serotype o17 expressing o-polysaccharide chain identical to the shigella sonnei o-chain. | plesiomonas shigelloides o17 lps contains the same o-antigenic polysaccharide chain as a causative agent of dysentery, shigella sonnei. this polysaccharide can be used as a component of a vaccine against dysentery. core part of the p. shigelloides o17 lps was studied using nmr and mass spectrometry and the following structure was proposed: [structure : see text]. significant similarity of the p. shigelloides o17 lps core with the structure of the p. shigelloides o54 core was observed. | 2008 | 18954864 |
| structure of the shigella t3ss effector ipah defines a new class of e3 ubiquitin ligases. | ipah proteins are e3 ubiquitin ligases delivered by the type iii secretion apparatus into host cells upon infection of humans by the gram-negative pathogen shigella flexneri. these proteins comprise a variable leucine-rich repeat-containing n-terminal domain and a conserved c-terminal domain harboring an invariant cysteine residue that is crucial for activity. ipah homologs are encoded by diverse animal and plant pathogens. here we demonstrate that the ipah c-terminal domain carries the catalyti ... | 2008 | 18997778 |
| structure of a shigella effector reveals a new class of ubiquitin ligases. | bacterial pathogens have evolved effector proteins with ubiquitin e3 ligase activities through structural mimicking. here we report the crystal structure of the shigella flexneri type iii effector ipah3, a member of the leucine-rich repeat (lrr)-containing bacterial e3 family. the lrr domain is structurally similar to yersinia pestis yopm and potentially binds to substrates. the structure of the c-terminal e3 domain differs from the typical ring- and hect-type e3s. ipah3 synthesizes a lys48-link ... | 2008 | 18997779 |
| [antibiotic resistance of bacterial strains in paediatric infections: there are resistance and resistance!]. | isolation of a bacterial strain at the infectious site and determination of the susceptibility profile may help to guide appropriate antibiotic treatment. however technical difficulties justify interpretative reading to recognize interfering resistance mechanisms from resistance phenotypes. the aim of this article is to give some examples showing interpretative reading of routine sensitivity test data. | 2008 | 19000854 |
| biometric fingerprinting for visa application: device and procedure are risk factors for infection transmission. | biometric fingerprint identity verification is currently introduced in visa application and entry screening at border control. the system implies physical contact between the skin and the surface of the fingerprint-capturing and reading devices. | 2008 | 19006507 |
| functional nanoparticle-based proteomic strategies for characterization of pathogenic bacteria. | although matrix-assisted laser desorption/ionization mass spectrometry (maldi ms) can be employed to rapidly characterize pathogenic bacteria, bacterial cultures are generally required to obtain sufficient quantities of the bacterial cells prior to maldi ms analysis. if this time-consuming step could be eliminated, the length of time required for identification of bacterial strains would be greatly reduced. in this paper, we propose an effective means of rapidly identifying bacteria--one that do ... | 2008 | 19007241 |
| gef-h1 mediated control of nod1 dependent nf-kappab activation by shigella effectors. | shigella flexneri has evolved the ability to modify host cell function with intracellular active effectors to overcome the intestinal barrier. the detection of these microbial effectors and the initiation of innate immune responses are critical for rapid mucosal defense activation. the guanine nucleotide exchange factor h1 (gef-h1) mediates rhoa activation required for cell invasion by the enteroinvasive pathogen shigella flexneri. surprisingly, gef-h1 is requisite for nf-kappab activation in re ... | 2008 | 19043560 |
| outbreaks where food workers have been implicated in the spread of foodborne disease. part 4. infective doses and pathogen carriage. | in this article, the fourth in a series reviewing the role of food workers in foodborne outbreaks, background information on the presence of enteric pathogens in the community, the numbers of organisms required to initiate an infection, and the length of carriage are presented. although workers have been implicated in outbreaks, they were not always aware of their infections, either because they were in the prodromic phase before symptoms began or because they were asymptomatic carriers. pathoge ... | 2008 | 19044283 |
| genomic analysis of bacteriophage epsilon 34 of salmonella enterica serovar anatum (15+). | the presence of prophages has been an important variable in genetic exchange and divergence in most bacteria. this study reports the determination of the genomic sequence of salmonella phage epsilon 34, a temperate bacteriophage that was important in the early study of prophages that modify their hosts' cell surface and is of a type (p22-like) that is common in salmonella genomes. | 2008 | 19091116 |
| analysis of plasmid genes by phylogenetic profiling and visualization of homology relationships using blast2network. | phylogenetic methods are well-established bioinformatic tools for sequence analysis, allowing to describe the non-independencies of sequences because of their common ancestor. however, the evolutionary profiles of bacterial genes are often complicated by hidden paralogy and extensive and/or (multiple) horizontal gene transfer (hgt) events which make bifurcating trees often inappropriate. in this context, plasmid sequences are paradigms of network-like relationships characterizing the evolution o ... | 2008 | 19099604 |
| [detection and identification of seven clinical common pathogenic bacteria by oligonucleotide microarray]. | using 16s rdna and 23s rdna genes as the target sequences to develop a system based on oligonucleotide microarray and to detect the seven clinical pathogenic bacteria, commonly seen. | 2008 | 19103121 |
| water-related diseases outbreaks reported in italy. | water related disease outbreak (wrdo) statistics in italy from 1998 to 2005 have been discussed in this paper. the true incidence of wrdo is not reflected in the national surveillance system (nss), although this study has provided information on pathogens associated to different water sources, incidence in regions and inadequacy of regulations. 192 outbreaks and 2546 cases of wrd were reported to the nss, an average of 318 cases per year. cases were associated to shellfish (58.79%), drinking wat ... | 2008 | 19108563 |
| in silico comparison of simple sequence repeats in high nucleotides-rich genomes of microorganism. | this study determined the distribution of a specific group of simple sequence repeats (ssrs), in genome sequences of 7 chromosomes (shigella flexneri 2a str 301 and 2457 t, shigella sonnei, e. coli k12, m. tuberculosis, m. leprae and s. saprophytycus) have downloaded from the genbank database for identifying abundance, distribution and composition of ssrs. the data obtained in the present study show that: (i) tandem repeats are widely distributed throughout the genomes. (ii) ssrs are differentia ... | 2008 | 19137845 |
| [typing of shigella sonnei strains isolated in some provinces of turkey using antimicrobial resistance and pulsed field gel electrophoresis methods]. | shigella species may lead to large epidemics owing to their low infective doses and frequent transmission from person to person with high secondary attack rates. shigella sonnei is one of the most prevalent causative agent of infectious gastroenteritis in developing and developed countries and it is the most frequently reported shigella serotype from turkey in recent years. the aim of this study was to determine the types of s. sonnei strains isolated in different provinces of turkey [in marmara ... | 2008 | 19149077 |
| [evaluation of laboratory diagnosis of the first norovirus outbreak in turkey in 2008]. | norovirus (nov) is one of the most prominent agents of gastroenteritis and water/food-borne outbreaks affecting all of the age groups in the world. as the identification of the etiologic agent is important during gastroenteritis outbreaks, it is recommended to combine two different methods for rapid and reliable laboratory diagnosis of nov. although nov outbreaks have been observed in many different countries of the world, there was no report on "nov outbreak" in turkey till 2008 due to the abse ... | 2008 | 19149082 |
| shigella and salmonella serogroups and their antibiotic susceptibility patterns in ethiopia. | in this study, the serogroup and susceptibility patterns of shigella and salmonella spp. isolated from stool cultures were determined using standard laboratory procedures. among the 76 shigella isolates serogroup b (sh. flexeneri) was the most prevalent species (54.0%) and among the 37 salmonella strains serogroup b was also the most prevalent (81.1%). antibiograms of shigella and salmonella spp. showed 100% resistance to erythromycin and high resistance rates (> or = 75%) to ampicillin, cephalo ... | 2008 | 19166157 |
| gateways to clinical trials. | 11d10, 9vpnc-mncc; adalimumab, adefovir dipivoxil, alefacept, aln-rsv01, ame-133, amg-317, aminolevulinic acid methyl ester, amlodipine besylate/atorvastatin calcium, anisodamine, anti-il-5 receptor antibody, apremilast, aripiprazole, atacicept, atazanavir sulfate, atrasentan; banoxantrone, bevacizumab, bibw-2992, binodenoson, bms-387032; cac10, caldaret hydrate, cd-np, ceftobiprole medocaril, celivarone fumarate, certolizumab pegol, cholesteryl hydrophobized polysaccharide-her2 protein complex, ... | 2008 | 18773127 |
| novel cassette arrays of integrons in clinical strains of enterobacteriaceae in china. | one hundred and forty-two enterobacteriaceae isolates randomly selected from four general hospitals in nanjing region of china were investigated for antibiotic susceptibility, the presence of integrons and the characterisation of gene cassettes. eighty-five (59.9%) enterobacteriaceae strains contained class 1 integrons, and 17 (65.4%) of 26 shigella contained class 2 integrons. class 3 integrons were not detected in this study. restriction fragment length polymorphism (rflp) and dna sequencing a ... | 2008 | 18778917 |
| novel fold of vira, a type iii secretion system effector protein from shigella flexneri. | vira, a secreted effector protein from shigella sp., has been shown to be necessary for its virulence. it was also reported that vira might be related to papain-like cysteine proteases and cleave alpha-tubulin, thus facilitating intracellular spreading. we have now determined the crystal structure of vira at 3.0 a resolution. the shape of the molecule resembles the letter "v," with the residues in the n-terminal third of the 45-kda molecule (some of which are disordered) forming one clearly iden ... | 2008 | 18787201 |
| [molecular typing of isolates from two dysentery outbreaks in chengdu, through pulsed field gel electrophoresis technology]. | using pulsed field gel electrophoresis (pfge) and polymerase chain reaction (pcr) typing to analyze strains isolated from two outbreaks caused by shigella sonnei and to trace the source of infection. | 2008 | 18788530 |
| the roles of two-component systems in virulence of pathogenic escherichia coli and shigella spp. | two-component systems (tcss) are well conserved among e. coli strains, including pathogenic e. coli and also closely related shigella spp. although 25% of the genome of pathogenic e. coli is strain-specific, only small number of strain-specific tcss is found. regulation of virulence genes in response to environmental stimuli is partly dependent on tcss commonly present in nonpathogenic e. coli strains. some virulence genes are directly regulated by response regulator oftcs but some are affected ... | 2008 | 18792690 |
| structural and functional studies indicate that shigella vira is not a protease and does not directly destabilize microtubules. | vira, an essential virulence factor in shigella disease pathogenesis, is involved in the uptake, motility, and cell-to-cell spread of shigella organisms within the human host. these functions have been attributed to a vira protease activity and a mechanism of microtubule destruction via tubulin degradation [yoshida, s., et al. (2006) science 314, 985-989]. we report functional and crystallographic data indicating a novel vira structure that lacks these activities but highlights the homology to t ... | 2008 | 18763811 |
| bacterial conjugation in the cytoplasm of mouse cells. | intracellular pathogenic organisms such as salmonellae and shigellae are able to evade the effects of many antibiotics because the drugs are not able to penetrate the plasma membrane. in addition, these bacteria may be able to transfer genes within cells while protected from the action of drugs. the primary mode by which virulence and antibiotic resistance genes are spread is bacterial conjugation. salmonellae have been shown to be competent for conjugation in the vacuoles of cultured mammalian ... | 2008 | 18765719 |
| shigellosis in puducherry. | 2008 | 18765885 | |
| molecular approach and bacterial quality of drinking water of urban and rural communities in egypt. | water is necessary to life so when supplied as drinking water to consumers, a satisfactory quality must be maintained. in egypt, infectious intestinal diseases are the major cause of hospitalization in almost all regions. the purpose of this study was to evaluate the microbiological quality of treated and untreated water samples from urban and rural communities. thirty-five samples of treated (chlorinated) water from taps, 25 samples of bottled water and 15 samples of hand pump (untreated) water ... | 2008 | 18800596 |
| incidence of bacterial enteropathogens among hospitalized diarrhea patients from orissa, india. | bacteriological analysis of 1,551 stool/rectal swabs from all age groups of diarrhea patients of different hospitals of orissa from january 2004 to december 2006 was carried out using standard procedures. among all enteropathogens isolated in 886 culture-positive samples, escherichia coli constituted 75.5%, including 13.2% pathogenic e. coli; vibrio cholerae o1 constituted 17.3%; v. cholerae o139, 1%; shigella spp., 4.5% (shigella flexneri type 6, 2.9%, s. dysenteriae type i, 0.7%, s. sonnei, 0. ... | 2008 | 18806340 |
| indications and challenges of probiotics, prebiotics, and synbiotics in the management of arthralgias and spondyloarthropathies in inflammatory bowel disease. | arthralgia and spondyloarthropathy of the peripheral and the axial joints are common in patients with inflammatory bowel diseases. evidence for this association has been provided by clinical, epidemiologic, and immunologic studies confirming the presence of shared inflammatory pathways in gut and joint. bacterial gut infections such as salmonella typhimurium, yersinia enterocolitica, shigella, campylobacter jejuni may induce reactive peripheral arthritis and 20% of these patients may develop chr ... | 2008 | 18806706 |
| [dysentery and amoebiasis in poland in 2006]. | the number of notified as shigellosis, bacillary dysentery cases in the three last years (2004, 2005, 2006) is lower and lower and is the lowest of all years since 1918 when notification started. only 35 cases were notified in the year 2006, while 80 were notified in 2005 (incidence rate 0.21/100 000 population), and 74 cases in 2004 (incidence rate 0.19/100 000 population). no one-death case was notified. the last three death cases were notified in 1999. no one outbreak was registered. twelve c ... | 2008 | 18807468 |
| [treatment of recurrent clostridium difficile-associated diarrhoea with a suspension of donor faeces]. | to study the effect of treating recurrent clostridium difficile-associated diarrhoea (cdad) with a suspension of donor faeces. | 2008 | 18808083 |
| [glycosphingolipids gb3 and igb3. in vivo roles in hemolytic-uremic syndrome and inkt cell function]. | the glycosphingolipids globotrihexosylceramide (gb3, cd77) and isoglobotrihexosylceramide (igb3) are isomers differing only in one glycosidic bond and have been implicated in several processes of the innate and adaptive immune system. | 2008 | 18810447 |
| mechanisms of infectious diarrhea. | infectious diarrhea is an important public health problem worldwide. research has provided new insights into the mechanisms of diarrhea caused by various pathogens that are classified as noninflammatory, inflammatory or invasive. these three groups of organisms cause two diarrheal syndromes--noninflammatory diarrhea and inflammatory diarrhea. the noninflammatory diarrheas are caused by enterotoxin-producing organisms such as vibrio cholerae and enterotoxigenic escherichia coli, or by viruses tha ... | 2008 | 18813221 |
| subproteomic tools to increase genome annotation complexity. | comprehensive and precise annotations of short protein-coding genes are always a challenging task. here we propose a new design to facilitate the characterization of previously overlooked short protein-coding genes by integrating a shotgun proteomics method and oligonucleotide array analysis. using shigella flexneri as a model, we validate 163 annotated orfs and 51 hypothetical or putative transcripts at the protein level, and discover four novel short orfs. this strategy will contribute signifi ... | 2008 | 18814329 |
| inhibitory effects of sage extract on the growth of enteric bacteria. | antibacterial activity of sage extract at concentrations of 0.1, 0.05, 0.025, 0.0125, 0.00625, 0.003125, 0.00156, 0.0005 and 0.00025 g dl(-1) against salmonella typhi, shigella sonnei, s. flexneri, proteus vulgaris, staphylococcus aureus, etec escherichia coli and pseudomonas aeruginosa was evaluated. susceptibility testing of bacterial strains against 18 antibiotics was also performed for comparison. the results showed that p. aeruginosa and etec e. coli were completely resistant to sage extrac ... | 2008 | 18817180 |
| [rotaviruses in younger children in novosibirsk in 2005-2007: detection and genotyping]. | examination of 1898 patients with acute enteric infection from march 2005 to february 2007 showed that group a rotaviruses were the most frequent cause (35%) of acute gastroenteritis among children under 3 years of age. majority of cases of rotavirus infection was detected in infants under 1 year of age (71.8%). the peak of sporadic incidence was observed between february and may. high rate of mixed infection (45.6%) was observed - associations of rotaviruses with other viruses (noroviruses, ast ... | 2008 | 18819400 |
| 'form variation' of the o12 antigen is critical for persistence of salmonella typhimurium in the murine intestine. | salmonella enterica subspecies i serotypes are responsible for the vast majority of salmonellosis in mammals and birds, yet only a few factors specific to this group that allow them to persist in this niche have been identified. we show that stm0557, a s. enterica subspecies i-specific gene encoding an inner membrane protein, is critical for faecal shedding and intestinal persistence of s. enterica serotype typhimurium atcc14028 in salmonella-resistant mice, but mutations in this gene do not dim ... | 2008 | 18826410 |
| bacteriophage 2851 is a prototype phage for dissemination of the shiga toxin variant gene 2c in escherichia coli o157:h7. | the production of shiga toxin (stx) (verocytotoxin) is a major virulence factor of escherichia coli o157:h7 strains (shiga toxin-producing e. coli [stec] o157). two types of shiga toxins, designated stx1 and stx2, are produced in stec o157. variants of the stx2 type (stx2, stx2c) are associated with high virulences of these strains for humans. a bacteriophage designated 2851 from a human stec o157 encoding the stx2c variant was described previously. nucleotide sequence analysis of the phage 2851 ... | 2008 | 18824528 |
| evaluation of methods for isolation of dna for polymerase chain reaction (pcr)-based identification of pathogenic bacteria from pure cultures and water samples. | polymerase chain reaction (pcr) provides a reliable detection of pathogenic bacteria in water samples. however, this method can be adversely influenced by the purity of the dna template. this is a particularly important obstacle when the bacterial dna is directly extracted from water samples. in this study we compared the suitability of 8 different methods for isolation of bacterial dna from pure cultures and 10 different methods for isolation of dna from water samples. the quality of extracted ... | 2008 | 18824796 |
| evaluation by real-time pcr of the expression of s. flexneri virulence-associated genes ospb and phon2 under different genetical backgrounds. | under conditions of activated type iii secretion shigella flexneri up-regulates the expression of numerous genes, including the virulence plasmid (pinv)-encoded ospb and phon2 genes. ospb and phon2 are virulence-associated genes which are part of a bicistronic transcriptional unit encoding ospb, a protein (effector) of unknown function secreted by the type iii secretion (tts) apparatus, and phon2 (apyrase or atp-diphosphohydrolase), a periplasmic protein involved in polar icsa localization on th ... | 2008 | 18831939 |
| [htpg protein of shigella flexneri 2a strain 2457t evokes inflammatory response in mice]. | to analyze the function of htpg of s. flexneri 2a 2457t, we constructed an htpg deletion mutant and a recovery mutant. | 2008 | 18837368 |
| [detection of staphylococcus aureus, shigella spp., salmonella spp. in food by multiplex pcr]. | to establish a multiplex pcr method for simultaneous detection of staphylococcus aureus, shigella spp., salmonella spp. in food. | 2008 | 18839528 |
| [the distribution and antimicrobial resistance tendency of pathogens associated with diarrhea in beijing]. | to monitor the constituents and resistant tendency of bacterial pathogens isolated from diarrheal patients in our hospital form 1994 to 2005 to offer the basis for guiding epidemiologic study, vaccination research and clinical treatment. | 2008 | 18843955 |
| [analysis of pulsed-field gel electrophoresis molecular subtyping of shigella strains in shenzhen]. | to analyze the genetic relations of shigella isolated from shenzhen in 2001-2006 and develop primary molecular subtyping surveillance network of shigella. | 2008 | 18844079 |
| [analysis on incidence of bacillary dysentery in jinan municipality from 1951 to 2005]. | to explore the epidemic characteristics of bacterial dysentery in jinan municipality, and to provide scientific basis for effective strategy for bacterial dysentery control. | 2008 | 18844085 |
| prevention of the cytopathic effect induced by clostridium difficile toxin b by active rac1. | clostridium difficile toxin b (tcdb) glucosylates low molecular weight gtp-binding proteins of the rho subfamily and thereby causes actin re-organization (cell rounding). this "cytopathic effect" has been generally attributed to rhoa inactivation. here we show that cells expressing non-glucosylatable rac1-q61l are protected from the cytopathic effect of tcdb. in contrast, cells expressing rhoa-q63l or mock-transfected cells are fully susceptible for the cytopathic effect of tcdb. these findings ... | 2008 | 18848548 |
| differential activation of human tlr4 by escherichia coli and shigella flexneri 2a lipopolysaccharide: combined effects of lipid a acylation state and tlr4 polymorphisms on signaling. | the lipid a of lps activates tlr4 through an interaction with myeloid differentiation protein-2 (md-2) and the degree of lipid a acylation affects tlr4 responsiveness. two tlr4 single nucleotide polymorphisms (asp299gly and thr399ile) have been associated with lps hyporesponsiveness. we hypothesized that the combination of hypoacylation and these single nucleotide polymorphisms would exhibit a compounded effect on tlr4 signaling. hek293t transfectants expressing wild-type or polymorphic tlr4 wer ... | 2008 | 18178854 |
| [new selective indicator medium for detection of aeromonas and plesiomonas: unisc agar]. | we evaluated a new selective indicator medium (unisc agar) for isolation of classical enteropathogens, aeromonas spp and plesiomonas shigelloides. the xylose fermentation capacity is indicated by a yellow color (fermenting agents) or blue (no fermenting agent). this, together with the oxidase test, establishes it as an indicator for detecting aeromonas and plesiomonas shigelloides. its productivity and selectivity, as assessed using the absolute count index and relative count index, indicate it ... | 2008 | 18853024 |
| in this issue: proteomics 20/2008. | in this issue of proteomics you will find the following highlighted articles:comprehensively confirmed annotation of short orfsduring the california gold rush, prospectors did not look only for large nuggets to pave their road to riches - they also collected gold dust. the proteomic equivalent of dust is the small orf. it does not pay to put a lower limit on dust or orf size because almost any size may be turned into "cash" or an important peptide. wei et al. demonstrate how a combination of con ... | 2008 | 18924177 |
| closing the diarrhoea diagnostic gap in indian children by the application of molecular techniques. | a large proportion of diarrhoeal illnesses in children in developing countries are ascribed to an unknown aetiology because the only available methods, such as microscopy and culture, have low sensitivity. this study was aimed at decreasing the diagnostic gap in diarrhoeal disease by the application of molecular techniques. faecal samples from 158 children with and 99 children without diarrhoea in a hospital in south india were tested for enteric pathogens using conventional diagnostic methods ( ... | 2008 | 18927413 |
| porin-incorporated liposome induces toll-like receptors 2- and 6-dependent maturation and type 1 response of dendritic cell. | porin of shigella dysenteriae was incorporated in liposome (pil) and presented to mouse splenic dendritic cells (dc). pil up-regulated toll-like receptor (tlr) 2 and tlr6 on dc, showing that co-expression of the two tlrs is involved in recognition of porin. detection of myeloid differentiating factor 88 (myd88)-tlr2 complex confirmed interaction between the two for triggering the downstream signaling, which ultimately led to tlr2-dependent nuclear translocation of nuclear factor-kappa b. pil-ind ... | 2008 | 18931363 |
| safety and colonization of two novel virg(icsa)-based live shigella sonnei vaccine strains in rhesus macaques (macaca mulatta). | shigella are gram-negative bacterium that cause bacillary dysentery (shigellosis). symptoms include diarrhea and discharge of bloody mucoid stools, accompanied by severe abdominal pain, nausea, vomiting, malaise, and fever. persons traveling to regions with poor sanitation and crowded conditions become particularly susceptible to shigellosis. currently a vaccine for shigella has not been licensed in the united states, and the organism quickly becomes resistant to medications. during the past 10 ... | 2008 | 19793462 |
| antimicrobial activity of some macrophytes from lake manzalah (egypt). | the antimicrobial activities of aqueous and organic solvents (chloroform, ethanol and methanol) extracts of four plants ceratophyllum demersum l., eichhornia crassipes, potamogeton crispus and potamogeton pectinatus were tested in vitro against seventeen different microorganisms including gram-positive and gram-negative bacteria and fungi. nine of these identified organisms were obtained from different sources, bacillus subtilis 1020, bacillus cereus 1080, staphylococcus aureus, erwinia carotovo ... | 2008 | 19205264 |