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the effect of omeprazole treatment on the gut microflora and neutrophil function.proton pump inhibitors (ppis) may increase the risk of clostridium difficile infections. there are interactions between gut microbiota and innate immune cells including neutrophils. we evaluated the effect of treatment with omeprazole on the gut microflora and neutrophil function.201728258834
impact of clostridium difficile infection in patients hospitalized with acute pancreatitis- a population based cohort study. 201728258934
hospital impact after a chemical spill that compromised the potable water supply: west virginia, january 2014.in january 2014, a chemical spill of 4-methylcyclohexanemethanol and propylene glycol phenyl ethers contaminated the potable water supply of approximately 300,000 west virginia residents. to understand the spill's impact on hospital operations, we surveyed representatives from 10 hospitals in the affected area during january 2014. we found that the spill-related loss of potable water affected many aspects of hospital patient care (eg, surgery, endoscopy, hemodialysis, and infection control of cl ...201728260560
inhibition of mrsa and of clostridium difficile by durancin 61a: synergy with bacteriocins and antibiotics.the aim of this study was to evaluate the efficacy of durancin 61a alone or in combination with nisin, pediocin pa-1, reuterin, microcin j25, vancomycin or tetracycline as an inhibitor of resistant clinical pathogens and to shed light on its mode of action.201728262046
whole genome sequences of three clade 3 clostridium difficile strains carrying binary toxin genes in china.clostridium difficile consists of six clades but studies on clade 3 are limited. here, we report genome sequences of three clade 3 c. difficile strains carrying genes encoding toxin a and b and the binary toxin. isolates 103 and 133 (both of st5) and isolate 106 (st285) were recovered from three icu patients. whole genome sequencing using hiseq 2500 revealed 4.1-mb genomes with 28-29% gc content. there were ≥1,104 snp between the isolates, suggesting they were not of a single clone. the toxin a ...201728262711
microbiome: fecal transplant in clostridium difficile and ulcerative colitis. dr. paul moayyedi in an interview with dr. roman jaeschke: part 2. 201728267142
the challenge of detecting indels in bacterial genomes from short-read sequencing data.we tested the capabilities of four different software tools to detect insertions and deletions (indels) in a bacterial genome on the basis of short sequencing reads. we included tools applying the gapped-alignment (varscan, freebayes) or split-read (pindel) methods, respectively, and a combinatorial approach with local de-novo assembly (scanindel). tests were performed with 151-basepair, paired-end sequencing reads simulated from a bacterial (clostridioides difficile r20291) genome sequence with ...201728267569
clostridium difficile disease: diagnosis, pathogenesis, and treatment update.clostridium difficile infections are the leading cause of health care-associated infectious diarrhea, posing a significant risk for both medical and surgical patients. because of the significant morbidity and mortality associated with c difficile infections, knowledge of the epidemiology of c difficile in combination with a high index of suspicion and susceptible patient populations (including surgical, postcolectomy, and inflammatory bowel disease patients) is warranted. c difficile infections ...201728267992
a rare case of raoultella planticola urinary tract infection in an immunocompromised patient with multiple myeloma.raoultella planticola is a gram-negative rod associated with soil and aquatic environments that has rarely been associated with human infections.201728271042
recurrent clostridium difficile infection among medicare patients in nursing homes: a population-based cohort study.we explored the epidemiology and outcomes of clostridium difficile infection (cdi) recurrence among medicare patients in a nursing home (nh) whose cdi originated in acute care hospitals.we conducted a retrospective, population-based matched cohort combining medicare claims with minimum data set 3.0, including all hospitalized patients age ≥65 years transferred to an nh after hospitalization with cdi 1/2011-11/2012. incident cdi was defined as icd-9-cm code 008.45 with no others in prior 60 days. ...201728272217
a retrospective study to describe the epidemiology and outcomes of opportunistic infections after abdominal organ transplantation.most epidemiologic studies of opportunistic infections (oi) following abdominal organ transplant (aot) are derived prior to the era of contemporary immunosuppression and prophylaxis. these studies suggest that most oi occur within the first 6 months post transplant.201728273393
[selection of laboratory procedures to detect toxigenic by the 2-step method].the 2-step method is an algorithm to detect toxigenic clostridium difficile. we herein compared the sensitivities and specificities of an enzyme immunoassay (toxin a/b-eia), toxigenic culture (tc-eia), loop-mediated isothermal amplification assay (lamp), and xpert c. difficile (xpert) with the detection of the toxin b gene by a polymerase chain reaction (pcr). the results obtained showed that the sensitivities and specificities of toxin a/b-eia, xpert, tc-eia, and lamp were 30 and 100%, 87.2 and ...201728274126
emerging monoclonal antibodies against clostridium difficile infection.clostridium difficile infections are characterized by a high recurrence rate despite antibiotic treatments and there is an urgent need to develop new treatments such as fecal transplantation and immonotherapy. besides active immunotherapy with vaccines, passive immunotherapy has shown promise, especially with monoclonal antibodies. areas covered: herein, the authors review the different assays performed with monoclonal antibodies against c. difficile toxins and surface proteins to treat or preve ...201728274145
role of postgraduate year 2 pharmacy residents in providing weekend antimicrobial stewardship coverage in an academic medical center.the integration of pharmacy residents into an antimicrobial stewardship program (asp) is described, and data on the residents' asp interventions and outcomes are reported.201728274985
strategies for optimizing the diagnostic predictive value of clostridium difficile molecular diagnostics.because nucleic acid amplification tests (naats) do not distinguish clostridium difficile infection (cdi) and asymptomatic c. difficile carriage, the diagnostic predictive value of naats is limited when used in patients with low probability of cdi. in this issue of the journal of clinical microbiology, truong et al. report significant reductions in hospital-onset cdi and oral vancomycin utilization at their institution following implementation of a novel intervention that leveraged their clinica ...201728275072
clostridium difficile associated disease: burden of and predictors for in hospital fatal outcome. results of a hospital-based study, bucharest, romania.in the last 15 years clostridium difficile infection became a typical new emergent threat worldwide. our aim was to describe the risk factors associated with fatal outcome of clostridium difficile associated disease (cdad) cases treated in 2012 in "dr victor babes" infectious and tropical diseases hospital, a 450 beds teaching clinic from bucharest, romania.201528275398
clostridium difficile colitis in trauma patients - a global step by step review.clostridium difficile associated disease is a well recognized nosocomial infection evolving as a severediarrheal illness, associated with significantly higher rates of morbidity and mortality in critically ill patients. the incidence of clostridium difficile infection is higher and its impact is more severe in trauma patients when compared with general inpatient population. there are several potential diagnosis tools for clostridium difficile colitis, however choosing the right diagnostic approa ...201528275412
gastrointestinal organoids: understanding the molecular basis of the host-microbe interface.in recent years, increasing attention has been devoted to the concept that microorganisms play an integral role in human physiology and pathophysiology. despite this, the molecular basis of host-pathogen and host-symbiont interactions in the human intestine remains poorly understood owing to the limited availability of human tissue, and the biological complexity of host-microbe interactions. over the past decade, technological advances have enabled long-term culture of organotypic intestinal tis ...201728275681
epidemiology and risk factors for clostridium difficile infection in critically ill patients in spain: the procrid study.our objectives were to describe the incidence, clinical characteristics, and risk factors for clostridium difficile infection (cdi) in critically ill patients and to determine c. difficile pcr-ribotypes.201728279489
factors associated with clostridium difficile infection: a nested case-control study in a three year prospective cohort.clostridium difficile infection (cdi) is a serious medical condition that is associated with substantial morbidity and mortality. identification of risk factors associated with cdi and prompt recognition of patients at risk is key to successfully preventing cdi.201728279859
inhibition of spore germination, growth, and toxin activity of clinically relevant c. difficile strains by gut microbiota derived secondary bile acids.the changing epidemiology of clostridium difficile infection over the past decades presents a significant challenge in the management of c. difficile associated diseases. the gastrointestinal tract microbiota provides colonization resistance against c. difficile, and growing evidence suggests that gut microbial derived secondary bile acids (sbas) play a role. we hypothesized that the c. difficile life cycle; spore germination and outgrowth, growth, and toxin production, of strains that vary by a ...201728279860
community dynamics drive punctuated engraftment of the fecal microbiome following transplantation using freeze-dried, encapsulated fecal microbiota.fecal microbiota transplantation (fmt) is a highly effective treatment of recurrent and recalcitrant clostridium difficile infection (rcdi). in a recent study oral-delivery of encapsulated, freeze-dried donor material, resulted in comparable rates of cure to colonoscopic approaches. here we characterize shifts in the fecal bacterial community structure of patients treated for rcdi using encapsulated donor material. prior to fmt, patient fecal samples showed declines in diversity and abundance of ...201728282270
clostridium difficile-derived membrane vesicles induce the expression of pro-inflammatory cytokine genes and cytotoxicity in colonic epithelial cells in vitro.clostridium difficile is the most common etiological agent of antibiotic-associated diarrhea in hospitalized and non-hospitalized patients. this study investigated the secretion of membrane vesicles (mvs) from c. difficile and determined the expression of pro-inflammatory cytokine genes and cytotoxicity of c. difficile mvs in epithelial cells in vitro. c. difficile atcc 43255 and two clinical isolates secreted spherical mvs during in vitro culture. proteomic analysis revealed that mvs of c. diff ...201728284851
using clinical scenarios to understand preventability of clostridium difficile infections by inpatient antibiotic stewardship programs. 201728285605
toxin production of clostridium difficile in sub-mic of vancomycin and clindamycin alone and in combination with ceftazidime.toxin production in clostridium difficile (c. difficile) is a key process for induction of diarrhea. several factors such as sub-mic of antibiotics impact on toxin production. the aim of this research is investigation of sub-minimum inhibitory concentration (sub-mic) of vancomycin (van), clindamycin (cli) separately and in combination with ceftazidime (caz) on toxin production in c. difficile. about ∼10(6) colony forming units (cfu) from 18-h culture of c. difficile atcc 9689 and clinical isolat ...201728286152
treatment of recurrent clostridium difficile diarrhea.treatment of recurrent clostridium difficile-associated diarrhea can be challenging. once patients develop recurrent disease, further episodes are common and can continue for months or even a year or more. treatment begins with a repeat standard 10-day course of antibiotics, followed by tapering and/or pulsing of the antibiotic dose. probiotics can also be useful, particularly the nonpathogenic yeast saccharomyces boulardii. stool reconstitution via fecal enemas, colonoscopy, and nasogastric tub ...200628286449
cadazolid for the treatment of clostridium difficile.antibiotic development goals for cdi include potent antimicrobial effect against c. difficile, limited killing of host microbiota, potential effect on spores, and ability to interfere with toxin production. cadazolid, a novel, non-absorbable hybrid antibiotic has many of these criteria. in phase i and ii clinical trials, cadazolid was shown to be safe, well tolerated, and efficacious positioning itself as a potential future viable therapeutic option for cdi. areas covered: this review provides a ...201728286992
determining clostridium difficile intra-taxa diversity by mining multilocus sequence typing databases.multilocus sequence typing (mlst) is a highly discriminatory typing strategy; it is reproducible and scalable. there is a mlst scheme for clostridium difficile (cd), a gram positive bacillus causing different pathologies of the gastrointestinal tract. this work was aimed at describing the frequency of sequence types (sts) and clades (c) reported and evalute the intra-taxa diversity in the cd mlst database (cd-mlst-db) using an mlsa approach.201728288567
donor considerations in fecal microbiota transplantation.tremendous acceleration has been made in understanding the gut microbiota in the past decade and, with it, further understanding of the pathologic role of dysbiosis and the use of fecal microbiota transplantation (fmt) as therapy. fmt has been studied in many disease states including the most common indication of clostridium difficile infection (cdi), though many questions regarding stool donor selection remain.201728289858
effect of united states buckwheat honey on antibiotic-resistant hospital acquired pathogens.due to an upsurge in antibiotic-resistant infections and lack of therapeutic options, new approaches are needed for treatment. honey may be one such potential therapeutic option. we investigated the susceptibility of hospital acquired pathogens to four honeys from wisconsin, united states, and then determined if the antibacterial effect of each honey against these pathogens is primarily due to the high sugar content.201628292167
conventional and alternative treatment approaches for clostridium difficile infection.clostridium difficile-associated disease continues to be one of the leading health concerns worldwide. c. difficile is considered as a causative agent of nosocomial diarrhea that causes serious infection, which may result in death. the incidences of c. difficile infection (cdi) in developed countries have become increasingly high which may be attributed to the emergence of newer epidemic strains, extensive use of antibiotics, and limited alternative therapies. the available treatment options aga ...201728293151
the epidemiology of clostridium difficile infection in a national kidney transplant centre.we aimed to describe the epidemiology and outcomes of cdi in a national kidney transplant centre from 2008-2015.201728295646
frequency and risk factors of clostridium difficile infection in hospitalized patients with pouchitis: a population-based study.clostridium difficile infection (cdi) in patients with the ileal pouch after proctocolectomy has been increasingly recognized. we sought to evaluate the frequency and risk factors of cdi in patients with the primary or secondary discharge diagnosis of pouchitis in the united states.201728296825
cost-effectiveness analysis on the use of fidaxomicin and vancomycin to treat clostridium difficile infection in france.fidaxomicin is a macrocyclic antibiotic with proven efficacy against clostridium difficile infection (cdi) in adults. it was licensed in france in 2012, but, due to higher acquisition costs compared with existing treatments, healthcare providers require information on its cost/benefit profile.201728299963
clostridium difficile infection in acute care hospitals: systematic review and best practices for prevention.objective prevention of clostridium difficile infection (cdi) in acute-care hospitals is a priority for hospitals and clinicians. we performed a qualitative systematic review to update the evidence on interventions to prevent cdi published since 2009. design we searched ovid, medline, embase, the cochrane library, cinahl, the isi web of knowledge, and grey literature databases from january 1, 2009 to august 1, 2015. setting we included studies performed in acute-care hospitals. patients or parti ...201728300019
intracolonic vancomycin through laprascopic appendicostomy for treatment of severe clostridium difficile colitis does not get systemic absorption. 201728301334
deprescribing versus continuation of chronic proton pump inhibitor use in adults.proton pump inhibitors (ppis) are a class of medications that reduce acid secretion and are used for treating many conditions such as gastroesophageal reflux disease (gerd), dyspepsia, reflux esophagitis, peptic ulcer disease, and hypersecretory conditions (e.g. zollinger-ellison syndrome), and as part of the eradication therapy for helicobacter pylori bacteria. however, approximately 25% to 70% of people are prescribed a ppi inappropriately. chronic ppi use without reassessment contributes to p ...201728301676
clostridium difficile toxin a induces reactive oxygen species production and p38mapk activation to exert cellular toxicity in neuronal cells.clostridium difficile releases two exotoxins, toxin a and toxin b, which disrupt the epithelial cell barrier in the gut to increase mucosal permeability and trigger inflammation with severe diarrhea. many studies have suggested that enteric nerves are also directly involved in the progression of this toxin-mediated inflammation and diarrhea. c. difficile toxin a is known to enhance neurotransmitter secretion, increase gut motility, and suppress sympathetic neurotransmission in the guinea pig col ...201728301919
a qualitative study to identify reasons for clostridium difficile testing in pediatric inpatients receiving laxatives or stool softeners.to understand why clinicians send clostridium difficile tests from hospitalized children receiving laxatives or stool softeners, we performed a mixed-methods study. we prospectively identified tested patients and surveyed their clinicians by e-mail. reasons for testing included changes in stooling pattern on baseline bowel regimen, other changes in clinical status, and risk factors for c difficile infection. education targeting discontinuing bowel medications before c difficile testing could imp ...201728302431
the impact of antibiotic stewardship programs in combating quinolone resistance: a systematic review and recommendations for more efficient interventions.quinolones are among the most commonly prescribed antibiotics worldwide. a clear relationship has been demonstrated between excessive quinolone use and the steady increase in the incidence of quinolone-resistant bacterial pathogens, both in hospital and community sites. in addition, exposure to quinolones has been associated with colonization and infection with healthcare-associated pathogens such as methicillin-resistant staphylococcus aureus and clostridium difficile in hospitalized patients. ...201728303388
the attributable burden of clostridium difficile infection to long-term care facilities stay: a clinical study.advanced age, history of hospitalization, and antibiotic consumption are associated with the pathogenesis of clostridium difficile infection (cdi). long-term care facilities (ltcfs) represent a setting where cdi has been increasingly reported. we aimed to estimate the actual attributable burden of cdi to ltcf stay and determine the characteristics of the disease epidemiology in this setting.201728306141
epidemiology, risk factors and outcome of clostridium difficile infection in heart and heart-lung transplant recipients.clostridium difficile is a major cause of diarrhea in thoracic organ transplant recipients. we investigated the epidemiology, risk factors and outcome of clostridium difficile infection (cdi) in heart and heart-lung transplant (ht) recipients.201728314071
assessment of risk factors for candidemia in non-neutropenic patients hospitalized in internal medicine wards: a multicenter study.an increasing prevalence of candidemia has been reported in internal medicine wards (imws). the aim of our study was to identify risk factors for candidemia among non-neutropenic patients hospitalized in imws.201728314653
novel indications for fecal microbial transplantation: update and review of the literature.fecal microbial transplantation (fmt) is an established successful treatment modality for recurrent clostridium difficile infection (cdi). the safety profile and potential therapeutic advantages of fmt for diseases associated with dysbiosis and immune dysfunction have led to many publications, mainly case series, and while many studies and reviews have been published on the use of fmt for inflammatory bowel disease (ibd), its potential use for other disease conditions has not been thoroughly rev ...201728315032
snake in the grass: a case report of transfusion reactions due to contaminated donor arm disinfectant.bacterial contamination of blood components remains an on-going challenge. in the majority of cases, organisms contaminating the blood components are a part of normal skin flora. here, we report a case of bacterial contamination of blood units through contaminated donor arm disinfectant. there was a series of reactions due to random donor platelet (rdp) transfusion. the patients had features of septic transfusion reactions. on root cause analysis, spirit swabs used for disinfection of donors' ar ...201728316441
fecal microbiota transplantation in clostridium difficile infection: evidence and indications. 201728318210
antibiotic-associated diarrhea: clinical characteristics and the presence of clostridium difficile.evidence in colombia and latin america has been insufficient for establishing the clinical characteristics of patients with antibiotic-associated diarrhea (aad). the present study attempts to describe the clinical characteristics of patients with aad and to determine the presence of clostridium difficile, utilizing the polymerase chain reaction (pcr) technique.201728318702
infection control implications of the laundering of ambulance staff uniforms and reusable mops.there is a lack of published studies on laundering in ambulance services. we performed bacterial culture on soiled and unsoiled uniforms and reusable mop heads artificially contaminated with escherichia coli, staphylococcus aureus, and clostridium difficile spores. current laundering processes used for routine cleans in the ambulances appears, from our simulations, to be effective at reducing vegetative pathogenic bacteria to undetectable levels, <3.398log10 colony-forming units (s. aureus and e ...201728318779
patient mortality during unannounced accreditation surveys at us hospitals.in the united states, hospitals receive accreditation through unannounced on-site inspections (ie, surveys) by the joint commission (tjc), which are high-pressure periods to demonstrate compliance with best practices. no research has addressed whether the potential changes in behavior and heightened vigilance during a tjc survey are associated with changes in patient outcomes.201728319229
evaluation of fixed and variable hospital costs due to clostridium difficile infection: institutional incentives and directions for future research.economic analysis of clostridium difficile infection (cdi) should consider the incentives facing institutional decision-makers. to avoid overstating the financial benefits of infection prevention, fixed and variable costs should be distinguished.201728320542
clostridium difficile: still costly, still difficult to treat, and still here. 201728320543
current knowledge on the laboratory diagnosis of clostridium difficile infection.clostridium difficile (c. difficile) is a spore-forming, toxin-producing, gram-positive anaerobic bacterium that is the principal etiologic agent of antibiotic-associated diarrhea. infection with c. difficile (cdi) is characterized by diarrhea in clinical syndromes that vary from self-limited to mild or severe. since its initial recognition as the causative agent of pseudomembranous colitis, c. difficile has spread around the world. cdi is one of the most common healthcare-associated infections ...201728321156
production of ramoplanin and ramoplanin analogs by actinomycetes.ramoplanin is a glycolipodepsipeptide antibiotic obtained from fermentation of actinoplanes sp. atcc 33076 that exhibits activity against clinically important multi-drug-resistant, gram-positive pathogens including vancomycin-resistant enterococcus (vre), methicillin-resistant staphylococcus aureus (mrsa), and vancomycin-intermediate resistant clostridium difficile. it disrupts bacterial cell wall through a unique mechanism of action by sequestering the peptidoglycan intermediate lipid ii and th ...201728321210
permanent bulbar urethral ligation: emerging treatment option for incontinent men with end-stage urethra.to report our experience with permanent urethral ligation for severe incontinence among men with end-stage urethra.201728322899
bezlotoxumab (zinplava) for prevention of recurrent clostridium difficile infection. 201728323808
quality of care and outcomes among hospitalized inflammatory bowel disease patients: a multicenter retrospective study.half of patients with inflammatory bowel disease (ibd) require hospitalization. we sought to characterize inpatient quality indicators of care and outcomes during ibd-related hospitalizations at 4 major ibd referral centers in canada.201728328622
a significant influence of metronidazole on busulfan pharmacokinetics: a case report of therapeutic drug monitoring.busulfan is a cytotoxic agent used in preconditioning for hematopoietic stem cell transplantation (hsct). therapeutic drug monitoring of busulfan is necessary owing to its narrow therapeutic range. patients undergoing preconditioning are susceptible to infection and might require co-administration of antibiotics. we present a case study of a three-year-old girl with precursor t-cell acute lymphoblastic leukemia who received intravenous busulfan before hsct. metronidazole was co-administered befo ...201728328762
protective factors in the intestinal microbiome against clostridium difficile infection in recipients of allogeneic hematopoietic stem cell transplantation.clostridium difficile infection (cdi) is a frequent complication in recipients of allogeneic hematopoietic stem cell transplantation (allo-hsct), who receive intensive treatments that significantly disrupt the intestinal microbiota. in this study, we examined the microbiota composition of allo-hsct recipients to identify bacterial colonizers that confer protection against cdi following engraftment.201728329030
practice patterns and outcomes associated with procalcitonin use in critically ill patients with sepsis.randomized trials support use of procalcitonin-based algorithms to decrease duration of antibiotics for critically ill patients with sepsis. however, current utilization of procalcitonin and associated outcomes in "real world" clinical settings is unclear. we sought to determine procalcitonin utilization in critically ill patients with sepsis in the united states and to examine associations between procalcitonin use and clinical outcomes.201728329238
evaluating risk factors for clostridium difficile infection in stem cell transplant recipients: a national study.objective large-scale studies evaluating risk factors for clostridium difficile infection (cdi), a leading cause of infectious diarrhea among patients undergoing stem cell transplantation (sct), are lacking. we have evaluated risk factors for cdi among both autologous sct (auto-sct), and allogeneic sct (allo-sct) recipients using the national inpatient sample (nis) database provided by the healthcare cost and utilization project (hcup). methods we used patient data obtained from the nis database ...201728330512
ivig - a cure to severe refractory nap-1 clostridium difficile colitis? a case of successful treatment of severe infection, which failed standard therapy including fecal microbiota transplants and fidaxomicin.the mainstay treatment of clostridium difficile infections (cdi) is antimicrobials with growing support for fecal microbiota transplants. we report the first case of an elderly man with severe refractory nap-1 pseudomembranous cdi who failed all medical therapy and two fecal transplants with response only seen after administration of intravenous immunoglobulin.201728331803
molecular typing and antimicrobial susceptibility testing to six antimicrobials of clostridium difficile isolates from three czech hospitals in eastern bohemia in 2011-2012.in 2011-2012, a survey was performed in three regional hospitals in the czech republic to determine the incidence of clostridium difficile infections (cdis) and to characterize bacterial isolates. c. difficile isolates were characterized by pcr ribotyping, toxin genes detection, multiple-locus variable-number tandem-repeat analysis (mlva), and antimicrobial susceptibility testing to fidaxomicin, vancomycin, metronidazole, clindamycin, lff571, and moxifloxacin using agar dilution method. the inci ...201728332133
corrigendum: clostridium difficile infection worsen outcome of hospitalized patients with inflammatory bowel disease. 201728332614
outcomes of multisite antimicrobial stewardship programme implementation with a shared clinical decision support system.studies evaluating antimicrobial stewardship programmes (asps) supported by computerized clinical decision support systems (cdsss) have predominantly been conducted in single site metropolitan hospitals.201728333302
morbidity in pregnant women associated with unverified penicillin allergies, antibiotic use, and group b streptococcus infections.the morbidity potentially associated with unverified penicillin allergy in pregnant women, with and without group b streptococcus (gbs) infections, is unknown. penicillin allergy testing is safe during pregnancy but is done infrequently.201728333608
surface layer proteins from virulent clostridium difficile ribotypes exhibit signatures of positive selection with consequences for innate immune response.clostridium difficile is a nosocomial pathogen prevalent in hospitals worldwide and increasingly common in the community. sequence differences have been shown to be present in the surface layer proteins (slps) from different c. difficile ribotypes (rt) however whether these differences influence severity of infection is still not clear.201728335725
development of a bedside scoring system for predicting a first recurrence of clostridium difficile-associated diarrhea.a scoring system for identifying patients at high or low risk for recurrent clostridium difficile-associated diarrhea (cdad) is described.201728336757
clostridium difficile infections in patients with inflammatory bowel disease.case report of a 23-year-old male presenting with a severe flare of crohn's disease, exacerbated by community-acquired infection with clostridium difficile. this case outlines the association between c. difficile infection and inflammatory bowel disease, as both a mimic and a precipitant of flares. the discussion concerns the latest literature consensus on assessment and management of clostridium difficile infection in patients with inflammatory bowel disease.201728337044
testing for clostridium difficile in patients with cancer. 201728339307
comparison of fungal culture to surgical pathology exam in the detection of dimorphic fungi and the impact on treatment and outcomes: a 25-year retrospective review at a tertiary cancer center.the first nonactivated 4-factor prothrombin complex concentrate (pcc) is approved in the united states for warfarin reversal prior to emergent invasive procedures and in bleeding patients based on noninferiority studies vs plasma. this approval opened the door for off-label pcc use (eg, trauma, liver failure). we have also observed that some patients have received pcc and plasma to reverse a prolonged prothrombin time, instead of pcc alone. herein, we examined how often pcc was used for an off-l ...201728339920
molecular detection of clostridium difficile on inert surfaces from a costa rican hospital during and after an outbreak.hospital transmission of clostridium difficile is fostered by contamination of surfaces and medical equipment with spores highly resistant to disinfectants and regular cleaning procedures. despite the outbreaks and fatalities that c difficile causes, its epidemiology has not been studied in hospitals from middle- and low-income countries. to tackle this knowledge gap, the detection frequency of c difficile dna on inert surfaces of a major costa rican hospital during and after an outbreak was com ...201628340959
pulsed-xenon ultraviolet light disinfection in a burn unit: impact on environmental bioburden, multidrug-resistant organism acquisition and healthcare associated infections.portable pulsed xenon ultraviolet disinfection (ppx-uvd) may reduce healthcare associated infections (hai). there is limited data to inform use in burn intensive care units (bicu), where multidrug-resistant organisms (mdro), especially gram negative rods (gnr), commonly cause disease. we evaluated ppx-uvd effects on environmental bioburden and rates of hai and mdro acquisition in a bicu. ppx-uvd was used for 3 months after standard cleaning of patient and operating rooms (ors). settle and touch ...201728341262
reducing clostridium difficile in the inpatient setting: a systematic review of the adherence to and effectiveness of c. difficile prevention bundles.background clostridium difficile infection (cdi) is the most common infectious cause of nosocomial diarrhea, and its prevention is an urgent public health priority. however, reduction of cdi is challenging because of its complex pathogenesis, large reservoirs of colonized patients, and the persistence of infectious spores. the literature lacks high-quality evidence for evaluating interventions, and many hospitals have implemented bundled interventions to reduce cdi with variable results. thus, w ...201728343455
fecal microbiota transplantation - methods of treatment of recurrent clostridium difficile infections and other diseases.clostridium difficile is a serious epidemiological problem and particularly dangerous microorganism causing hospital infections. currently, the treatment of c. difficile infections is the use of metronidazole or vancomycin. however, in some patients, recurrent infection difficult to treat occurs. fecal microbiota transplantation (fmt) is a new method used to treat the recurrent cdi. fmt consists in the infusion of the fecal suspension from a healthy donor into the gastrointestinal tract of a pat ...201728345530
recognition and management of clostridium difficile in older adults.clostridium difficile infection (cdi) is increasing in the outpatient setting, and older adults are at a higher risk for contracting cdi and experiencing poor outcomes. nps may see this infection in the primary care setting. this article focuses on the presentation, treatment, and clinical practice implications for cdi in community-dwelling older adults.201728346281
a genetic switch controls the production of flagella and toxins in clostridium difficile.in the human intestinal pathogen clostridium difficile, flagella promote adherence to intestinal epithelial cells. flagellar gene expression also indirectly impacts production of the glucosylating toxins, which are essential to diarrheal disease development. thus, factors that regulate the expression of the flgb operon will likely impact toxin production in addition to flagellar motility. here, we report the identification a "flagellar switch" that controls the phase variable production of flage ...201728346491
association of gastric acid suppression with recurrent clostridium difficile infection: a systematic review and meta-analysis.gastric acid suppression has been associated with an increased risk of primary clostridium difficile infection (cdi), but the risk of recurrent cdi in patients taking gastric acid suppressant medications is unclear.201728346595
withholding proton pump inhibitors to prevent recurrent clostridium difficile: time for a randomized trial. 201728346596
inactivation of <i>clostridium difficile</i> spore outgrowth by synergistic effects of nisin and lysozyme.inactivating <i>clostridium difficile</i> spores is difficult, as they are resistant to heat, chemicals, and antimicrobials. however, this note describes inactivation of <i>c. difficile</i> spore outgrowth by incubation in a solution containing a germinant (1% w/v sodium taurocholate), co-germinants (1% w/v tryptose and 1% w/v nacl), and natural antimicrobials (20 nm nisin and 0.2 mm lysozyme). <i>c. difficile</i> spores were resistant to nisin and lysozyme but became susceptible during germinat ...201728346844
primary prevention of clostridium difficile infections - how difficult can it be?c. difficile infections (cdi) have been a challenging disease to treat, much less to prevent, for decades. efforts for primary prevention have mainly focused on improving infection control practices, but cdi outbreaks continue to plague healthcare facilities. areas covered: a literature search from 1970-december 2016 found 13 facility-level and 2 patient-level strategies that were evidence-based. the aim of this manuscript is to assess the current state of the literature on primary prevention of ...201728347160
pharmacokinetics of surotomycin from phase 1 single and multiple ascending dose studies in healthy volunteers.surotomycin, a novel, orally administered, cyclic, lipopeptide antibacterial in development for the treatment of clostridium difficile-associated diarrhea, has demonstrated minimal intestinal absorption in animal models.201728347318
effect of a healthcare-system respiratory fluoroquinolone restriction program to alter utilization and impact rates of c. difficile infection.fluoroquinolones are one of the most commonly prescribed antibiotic classes in the united states despite their association with adverse consequences, including clostridium difficile infection (cdi). we sought to evaluate the impact of a healthcare-system antimicrobial stewardship-initiated respiratory fluoroquinolone restriction program on utilization, appropriateness of quinolone-based therapy based on institutional guidelines, and cdi rates. following implementation, respiratory fluoroquinolon ...201728348151
risk factors for clostridium difficile infection in hiv-infected patients.clostridium difficile infection is a healthcare-associated infection resulting in significant morbidity. although immunosuppression is associated with clostridium difficile infection acquisition and adverse outcomes, the epidemiology of clostridium difficile infection in hiv-infected patients has been little studied in the era of antiretroviral therapy. this study identifies the risk factors for acquisition of clostridium difficile infection in hiv-infected patients.201628348742
rhodococcus fascians infection after haematopoietic cell transplantation: not just a plant pathogen?rhodococcus spp. have been implicated in a variety of infections in immunocompromised and immunocompetent hosts. rhodococcus equi is responsible for the majority of reported cases, but rhodococcus erythropolis, rhodococcusgordoniae and rhodococcusruber infections have been described. there are no prior reports of human infection with rhodococcus fascians.201628348752
human clostridium difficile infection caused by a livestock-associated pcr ribotype 237 strain in western australia.clostridium difficile infection (cdi) is a significant gastrointestinal disease in the developed world and increasingly recognised as a zoonotic infection. in north america and europe, the pcr ribotype (rt) 078 strain of c. difficile is commonly found in production animals and as a cause of disease in humans although proof of transmission from animals is lacking. this strain is absent in australian livestock. we report a case of human cdi caused by a strain of c. difficile belonging to known aus ...201628348781
successful treatment of clostridium difficile bacteremia with aortic mycotic aneurysm in a patient with prior endovascular aortic aneurysm repair.the clinical spectrum of clostridium difficile infection can range from benign gastrointestinal colonization to mild diarrhea and life threatening conditions such as pseudomembranous colitis and toxic megacolon. extraintestinal manifestations of c. difficile are rare. here, we report a patient with a history of an endovascular aortic aneurysm repair (evar) presenting with an endovascular leak complicated by c. difficile bacteremia and a mycotic aneurysm. he was successfully treated with an expla ...201728348903
overexpression of the endosomal anion/proton exchanger clc-5 increases cell susceptibility toward clostridium difficile toxins tcda and tcdb.virulent c. difficile toxins tcda and tcdb invade host intestinal epithelia by endocytosis and use the acidic environment of intracellular vesicles for further processing and activation. we investigated the role of clc-5, a chloride/proton exchanger expressed in the endosomes of gastrointestinal epithelial cells, in the activation and processing of c. difficile toxins. enhanced intoxication by tcda and tcdb was observed in cells expressing clc-5 but not clc-4, another chloride/proton exchanger w ...201728348980
milk fat globule membrane supplementation in formula modulates the neonatal gut microbiome and normalizes intestinal development.breast milk has many beneficial properties and unusual characteristics including a unique fat component, termed milk fat globule membrane (mfgm). while breast milk yields important developmental benefits, there are situations where it is unavailable resulting in a need for formula feeding. most formulas do not contain mfgm, but derive their lipids from vegetable sources, which differ greatly in size and composition. here we tested the effects of mfgm supplementation on intestinal development and ...201728349941
enteric glial cells counteract clostridium difficile toxin b through a nadph oxidase/ros/jnk/caspase-3 axis, without involving mitochondrial pathways.enteric glial cells (egcs) are components of the intestinal epithelial barrier essential for regulating the enteric nervous system. clostridium difficile is the most common cause of antibiotic-associated colitis, toxin b (tcdb) being the major virulence factor, due to its ability to breach the intestinal epithelial barrier and to act on other cell types. here we investigated tcdb effects on egcs and the activated molecular mechanisms. already at 2 hours, tcdb triggered ros formation originating ...201728349972
gram-positive bacterial infections: research priorities, accomplishments, and future directions of the antibacterial resistance leadership group.antimicrobial resistance in gram-positive bacteria remains a challenge in infectious diseases. the mission of the gram-positive committee of the antibacterial resistance leadership group (arlg) is to advance knowledge in the prevention, management, and treatment of these challenging infections to improve patient outcomes. our committee has prioritized projects involving methicillin-resistant staphylococcus aureus (mrsa) and vancomycin-resistant enterococci (vre) due to the scope of the medical t ...201728350900
predominance of clostridium difficile 027 during a five-year period in bolzano, northern italy.toxigenic clostridium difficile is responsible for antibiotic-associated diarrhoea and other diseases. the increasing frequency and severity is attributed to highly-virulent ribotypes such as 027. the aim of the study was to collect epidemiological and molecular data for c. difficile isolates during 2009-2013 in the central hospital of bolzano, northern italy. stool samples from inpatients of the bolzano central hospital were screened for toxins a and b, and c. difficile was cultured and tested ...201728353450
molecular epidemiology and antimicrobial susceptibility of clostridium difficile isolates from two korean hospitals.clostridium difficile is one of the main etiological agents causing antibiotic-associated diarrhea. this study investigated the genetic diversity of 70 toxigenic c. difficile isolates from two korean hospitals by employing toxinotyping, ribotyping, multilocus sequence typing (mlst), and pulsed-field gel electrophoresis (pfge). toxin gene amplification resulted in 68 a⁺b⁺ and two a-b+ isolates. most isolates (95.7-100%) were susceptible to daptomycin, metronidazole, and vancomycin. seventy c. dif ...201728355266
clostridium difficile infection in returning travellers.there is increasing recognition of the contribution of community-acquired cases to the global burden of clostridium difficile infection (cdi). the epidemiology of cdi among international travellers is poorly understood, and factors associated with international travel, such as antibiotic use and changes in gut microbiota, could potentially put travellers at higher risk.201728355613
manual curation and reannotation of the genomes of clostridium difficile 630δerm and c. difficile 630.we resequenced the genome of clostridium difficile 630δerm (dsm 28645), a model strain commonly used for the generation of insertion mutants.201728357980
old and new models for studying host-microbe interactions in health and disease: c. difficile as an example.there has been an explosion of interest in studying the indigenous microbiota, which plays an important role in human health and disease. traditionally, the study of microbes in relationship to human health involved consideration of individual microbial species that caused classical infectious diseases. with the interest in the human microbiome, an appreciation of the influence that complex communities of microbes can have on their environment has developed. when considering either individual pa ...201728360030
risk factors for clostridium difficile infection in surgical patients hospitalized in a tertiary hospital in belgrade, serbia: a case-control study.the objective of this study was to investigate independent risk factors (rfs) connected with healthcare-associated (ha) clostridium difficile infection (cdi) in surgical patients, its frequency per surgical wards and in-hospital-mortality at a single hospital.201728360993
surgical prophylaxis with gentamicin and acute kidney injury: a systematic review and meta-analysis.gentamicin has been increasingly used instead of cephalosporins for surgical prophylaxis in an attempt to reduce the rate of "clostridium difficile" infection. there are limited data regarding nephrotoxicity related to gentamicin in these patients.201728361065
acid-suppressive therapy and risk of infections: pros and cons.this narrative review summarises the benefits, risks and appropriate use of acid-suppressing drugs (asds), proton pump inhibitors and histamine-2 receptor antagonists, advocating a rationale balanced and individualised approach aimed to minimise any serious adverse consequences. it focuses on current controversies on the potential of asds to contribute to infections-bacterial, parasitic, fungal, protozoan and viral, particularly in the elderly, comprehensively and critically discusses the growin ...201728361440
inferring microbial interaction networks from metagenomic data using sglv-ekf algorithm.inferring the microbial interaction networks (mins) and modeling their dynamics are critical in understanding the mechanisms of the bacterial ecosystem and designing antibiotic and/or probiotic therapies. recently, several approaches were proposed to infer mins using the generalized lotka-volterra (glv) model. main drawbacks of these models include the fact that these models only consider the measurement noise without taking into consideration the uncertainties in the underlying dynamics. furthe ...201728361680
gastrointestinal emergencies in critically ill cancer patients.to describe gastrointestinal emergencies in cancer patients.201728363097
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