| infectious bursal disease virus | species | viruses | species | viruses | 10995 |
| human rotavirus (serotype 2 / strain hn126) | no rank | viruses | no rank | viruses | 10951 |
| infectious bursal disease virus 52/70 | no rank | viruses | no rank | viruses | 10996 |
| human rotavirus serotype 1 / strain m37 | no rank | viruses | no rank | viruses | 10954 |
| infectious bursal disease virus oh | no rank | viruses | no rank | viruses | 10999 |
| human rotavirus strain mcn13 | no rank | viruses | no rank | viruses | 10955 |
| infectious bursal disease virus pbg-98 | no rank | viruses | no rank | viruses | 11000 |
| human rotavirus (serotype 2 / strain s2) | no rank | viruses | no rank | viruses | 10959 |
| infectious pancreatic necrosis virus - jasper | no rank | viruses | no rank | viruses | 11003 |
| human rotavirus g4 strain st. thomas 3 | no rank | viruses | no rank | viruses | 10960 |
| infectious pancreatic necrosis virus - n1 | no rank | viruses | no rank | viruses | 11004 |
| rabbit rotavirus | no rank | viruses | no rank | viruses | 10963 |
| ustilago maydis virus p4 | species | viruses | species | viruses | 11009 |
| porcine rotavirus a | no rank | viruses | no rank | viruses | 10967 |
| barmah forest virus | species | viruses | species | viruses | 11020 |
| rotavirus sp. | no rank | viruses | species | viruses | 10970 |
| middelburg virus | species | viruses | species | viruses | 11023 |
| rotavirus subgroup 2 | no rank | viruses | no rank | viruses | 10971 |
| highlands j virus | species | viruses | species | viruses | 11024 |
| euxoa scandens cypovirus 5 | no rank | viruses | no rank | viruses | 10983 |
| ross river virus | species | viruses | species | viruses | 11029 |
| wound tumor virus | species | viruses | species | viruses | 10987 |
| ross river virus (strain 213970) | no rank | viruses | no rank | viruses | 11030 |
| rice dwarf virus | species | viruses | species | viruses | 10991 |
| semliki forest virus | species | viruses | species | viruses | 11033 |
| infectious bursal disease virus 002-73/aus | no rank | viruses | no rank | viruses | 10997 |
| sindbis virus | species | viruses | species | viruses | 11034 |
| infectious bursal disease virus cu-1 | no rank | viruses | no rank | viruses | 10998 |
| venezuelan equine encephalitis virus | species | viruses | species | viruses | 11036 |
| infectious bursal disease virus stc | no rank | viruses | no rank | viruses | 11001 |
| western equine encephalitis virus | species | viruses | species | viruses | 11039 |
| infectious pancreatic necrosis virus | species | viruses | species | viruses | 11002 |
| rubella virus vaccine strain ra27/3 | no rank | viruses | no rank | viruses | 11044 |
| infectious pancreatic necrosis virus - sp | no rank | viruses | no rank | viruses | 11005 |
| rubella virus strain therien | no rank | viruses | no rank | viruses | 11045 |
| eastern equine encephalitis virus | species | viruses | species | viruses | 11021 |
| lactate dehydrogenase-elevating virus | species | viruses | species | viruses | 11048 |
| eastern equine encephalitis virus (strain va33[ten broeck]) | no rank | viruses | no rank | viruses | 11022 |
| lelystad virus | no rank | viruses | no rank | viruses | 11049 |
| o'nyong-nyong virus (strain gulu) | no rank | viruses | no rank | viruses | 11028 |
| dengue virus 1 | no rank | viruses | no rank | viruses | 11053 |
| ross river virus (strain nb5092) | no rank | viruses | no rank | viruses | 11031 |
| dengue virus 1 thailand/ahf 82-80/1980 | no rank | viruses | no rank | viruses | 11057 |
| ross river virus (strain t48) | no rank | viruses | no rank | viruses | 11032 |
| dengue virus 2 | no rank | viruses | no rank | viruses | 11060 |
| venezuelan equine encephalitis virus (strain tc-83) | no rank | viruses | no rank | viruses | 11037 |
| dengue virus 2 malaysia m2 | no rank | viruses | no rank | viruses | 11062 |
| venezuelan equine encephalitis virus (strain trinidad donkey) | no rank | viruses | no rank | viruses | 11038 |
| dengue virus 2 thailand/ngs-c/1944 | no rank | viruses | no rank | viruses | 11065 |
| rubella virus | species | viruses | species | viruses | 11041 |
| dengue virus 2 puerto rico/pr159-s1/1969 | no rank | viruses | no rank | viruses | 11066 |
| rubella virus strain m33 | no rank | viruses | no rank | viruses | 11043 |
| dengue virus 3 | no rank | viruses | no rank | viruses | 11069 |
| japanese encephalitis virus | species | viruses | species | viruses | 11072 |
| dengue virus 4 | no rank | viruses | no rank | viruses | 11070 |
| japanese encephalitis virus strain jaoars982 | no rank | viruses | no rank | viruses | 11075 |
| japanese encephalitis virus strain sa-14 | no rank | viruses | no rank | viruses | 11073 |
| japanese encephalitis virus strain nakayama | no rank | viruses | no rank | viruses | 11076 |
| japanese encephalitis virus strain sa(v) | no rank | viruses | no rank | viruses | 11074 |
| kunjin virus | no rank | viruses | no rank | viruses | 11077 |
| kunjin virus (strain mrm61c) | no rank | viruses | no rank | viruses | 11078 |
| st. louis encephalitis virus | species | viruses | species | viruses | 11080 |
| murray valley encephalitis virus | species | viruses | species | viruses | 11079 |
| st. louis encephalitis virus (strain ms1-7) | no rank | viruses | no rank | viruses | 11081 |
| west nile virus | species | viruses | species | viruses | 11082 |
| tick-borne encephalitis virus | species | viruses | species | viruses | 11084 |
| powassan virus | species | viruses | species | viruses | 11083 |
| langat virus | species | viruses | species | viruses | 11085 |
| louping ill virus | species | viruses | species | viruses | 11086 |
| tick-borne encephalitis virus (western subtype) | no rank | viruses | no rank | viruses | 11088 |
| broad bean wilt virus 1 | species | viruses | species | viruses | 50817 |
| yellow fever virus | species | viruses | species | viruses | 11089 |
| enterobacteria phage rb42 | no rank | viruses | species | phages | 50947 |
| ustilago maydis virus p6 | no rank | viruses | species | viruses | 11010 |
| human papillomavirus type 73 | no rank | viruses | no rank | viruses | 51033 |
| equine arteritis virus | species | viruses | species | viruses | 11047 |
| sida golden mosaic virus | species | viruses | species | viruses | 51034 |
| dengue virus 1 jamaica/cv1636/1977 | no rank | viruses | no rank | viruses | 11058 |
| unclassified dsdna viruses | | viruses | no rank | viruses | 51368 |
| dengue virus 1 nauru/west pac/1974 | no rank | viruses | no rank | viruses | 11059 |
| lactobacillus phage a2 | no rank | viruses | species | phages | 51369 |
| dengue virus 2 malaysia m3 | no rank | viruses | no rank | viruses | 11063 |
| cucurbit yellow stunting disorder virus | species | viruses | species | viruses | 51330 |
| dengue virus 2 jamaica/1409/1983 | no rank | viruses | no rank | viruses | 11064 |
| avian infectious bronchitis virus (strain beaudette) | no rank | viruses | no rank | viruses | 11122 |
| dengue virus 2 tonga/ekb194/1974 | no rank | viruses | no rank | viruses | 11067 |
| avian infectious bronchitis virus (strain beaudette m42) | no rank | viruses | no rank | viruses | 11123 |
| dengue virus 2 thailand/puo-218/1980 | no rank | viruses | no rank | viruses | 11068 |
| avian infectious bronchitis virus (strain m41) | no rank | viruses | no rank | viruses | 11127 |
| arthrobacter phage phi aau2 | no rank | viruses | species | phages | 50892 |
| bovine coronavirus | no rank | viruses | no rank | viruses | 11128 |
| enterobacteria phage rb49 | no rank | viruses | species | phages | 50948 |
| bovine coronavirus ly-138 | no rank | viruses | no rank | viruses | 11131 |
| pampa virus | species | viruses | species | viruses | 51317 |
| bovine coronavirus mebus | no rank | viruses | no rank | viruses | 11132 |
| cabbage leaf curl virus | species | viruses | species | viruses | 51336 |
| feline infectious peritonitis virus | no rank | viruses | no rank | viruses | 11135 |
| maize chlorotic dwarf virus | species | viruses | species | viruses | 51354 |
| human coronavirus 229e | species | viruses | species | viruses | 11137 |
| paramecium bursaria chlorella virus sc1a | species | viruses | species | viruses | 51374 |