| acanthamoeba polyphaga | 40 | species | invertebrates | protozoa | 5757 |
| opisthorchis viverrini | 40 | species | invertebrates | helminths | 6198 |
| sporothrix schenckii | 40 | species | plants | fungi | 29908 |
| clavispora lusitaniae | 40 | species | plants | fungi | 36911 |
| delftia acidovorans | 40 | species | bacteria | bacteria | 80866 |
| hafnia alvei | 39 | species | bacteria | bacteria | 569 |
| prevotella ruminicola | 39 | species | bacteria | bacteria | 839 |
| human coronavirus 229e | 39 | species | viruses | viruses | 11137 |
| streptococcus milleri | 39 | species | bacteria | bacteria | 33040 |
| chikungunya virus | 39 | species | viruses | viruses | 37124 |
| arthroderma otae | 39 | species | plants | fungi | 63405 |
| bacteroides vulgatus | 38 | species | bacteria | bacteria | 821 |
| paeniclostridium sordellii | 38 | species | bacteria | bacteria | 1505 |
| rhodotorula glutinis | 38 | species | plants | fungi | 5535 |
| cutaneotrichosporon cutaneum | 38 | species | plants | fungi | 5554 |
| orf virus | 38 | species | viruses | viruses | 10258 |
| st. louis encephalitis virus | 38 | species | viruses | viruses | 11080 |
| mycobacterium abscessus | 38 | species | bacteria | bacteria | 36809 |
| bordetella parapertussis | 37 | species | bacteria | bacteria | 519 |
| edwardsiella tarda | 37 | species | bacteria | bacteria | 636 |
| staphylococcus hyicus | 37 | species | bacteria | bacteria | 1284 |
| staphylococcus intermedius | 37 | species | bacteria | bacteria | 1285 |
| trueperella pyogenes | 37 | species | bacteria | bacteria | 1661 |
| mycoplasma fermentans | 37 | species | bacteria | bacteria | 2115 |
| anisakis simplex | 37 | species | invertebrates | helminths | 6269 |
| human parainfluenza virus 2 | 37 | species | viruses | viruses | 11212 |
| thogoto virus | 37 | species | viruses | viruses | 11569 |
| prevotella nigrescens | 37 | species | bacteria | bacteria | 28133 |
| arcobacter butzleri | 37 | species | bacteria | bacteria | 28197 |
| helicobacter heilmannii | 37 | species | bacteria | bacteria | 35817 |
| plesiomonas shigelloides | 36 | species | bacteria | bacteria | 703 |
| bartonella bacilliformis | 36 | species | bacteria | bacteria | 774 |
| rickettsia typhi | 36 | species | bacteria | bacteria | 785 |
| staphylococcus haemolyticus | 36 | species | bacteria | bacteria | 1283 |
| lactobacillus sp. | 36 | species | bacteria | bacteria | 1591 |
| taenia crassiceps | 36 | species | invertebrates | helminths | 6207 |
| molluscum contagiosum virus | 36 | species | viruses | viruses | 10279 |
| veillonella parvula | 36 | species | bacteria | bacteria | 29466 |
| yersinia ruckeri | 36 | species | bacteria | bacteria | 29486 |
| campylobacter lari | 35 | species | bacteria | bacteria | 201 |
| moraxella bovis | 35 | species | bacteria | bacteria | 476 |
| enterococcus gallinarum | 35 | species | bacteria | bacteria | 1353 |
| angiostrongylus cantonensis | 35 | species | invertebrates | helminths | 6313 |
| monkeypox virus | 35 | species | viruses | viruses | 10244 |
| aeromonas sobria | 34 | species | bacteria | bacteria | 646 |
| peptoniphilus asaccharolyticus | 34 | species | bacteria | bacteria | 1258 |
| mycobacterium xenopi | 34 | species | bacteria | bacteria | 1789 |
| auxenochlorella protothecoides | 34 | species | plants | | 3075 |
| curvularia lunata | 34 | species | plants | fungi | 5503 |
| human parainfluenza virus 1 | 34 | species | viruses | viruses | 12730 |
| trichophyton tonsurans | 34 | species | plants | fungi | 34387 |
| clostridium sporogenes | 33 | species | bacteria | bacteria | 1509 |
| corynebacterium pseudotuberculosis | 33 | species | bacteria | bacteria | 1719 |
| naegleria fowleri | 33 | species | invertebrates | protozoa | 5763 |
| hydatigera taeniaeformis | 33 | species | invertebrates | helminths | 6205 |
| rotavirus c | 33 | species | viruses | viruses | 36427 |
| aspergillus versicolor | 33 | species | plants | fungi | 46472 |
| ochrobactrum anthropi | 32 | species | bacteria | bacteria | 529 |
| listeria ivanovii | 32 | species | bacteria | bacteria | 1638 |
| microdochium nivale | 32 | species | plants | fungi | 5520 |
| plasmodium malariae | 32 | species | invertebrates | protozoa | 5858 |
| gordonia rubripertincta | 32 | species | bacteria | bacteria | 36822 |
| enterococcus casseliflavus | 32 | species | bacteria | bacteria | 37734 |
| schistocephalus solidus | 32 | species | invertebrates | helminths | 70667 |
| cystoisospora belli | 32 | species | invertebrates | protozoa | 482538 |
| microsporum gypseum | 32 | no rank | plants | fungi | 489714 |
| neisseria lactamica | 31 | species | bacteria | bacteria | 486 |
| citrobacter koseri | 31 | species | bacteria | bacteria | 545 |
| providencia rettgeri | 31 | species | bacteria | bacteria | 587 |
| streptococcus intermedius | 31 | species | bacteria | bacteria | 1338 |
| clostridium septicum | 31 | species | bacteria | bacteria | 1504 |
| mycobacterium gordonae | 31 | species | bacteria | bacteria | 1778 |
| mycobacterium scrofulaceum | 31 | species | bacteria | bacteria | 1783 |
| taenia saginata | 31 | species | invertebrates | helminths | 6206 |
| junin mammarenavirus | 31 | species | viruses | viruses | 11619 |
| moniezia expansa | 31 | species | invertebrates | helminths | 28841 |
| amycolatopsis orientalis | 31 | species | bacteria | bacteria | 31958 |
| babesia divergens | 31 | species | invertebrates | protozoa | 32595 |
| bunyamwera virus | 31 | species | viruses | viruses | 35304 |
| variant creutzfeldt-jakob disease agent | 31 | species | | | |
| haemophilus parainfluenzae | 30 | species | bacteria | bacteria | 729 |
| acidaminococcus fermentans | 30 | species | bacteria | bacteria | 905 |
| streptococcus equi | 30 | species | bacteria | bacteria | 1336 |
| rhizomucor pusillus | 30 | species | plants | fungi | 4840 |
| rhodotorula mucilaginosa | 30 | species | plants | fungi | 5537 |
| loa loa | 30 | species | invertebrates | helminths | 7209 |
| western equine encephalitis virus | 30 | species | viruses | viruses | 11039 |
| purpureocillium lilacinum | 30 | species | plants | fungi | 33203 |
| chaetomium globosum | 30 | species | plants | fungi | 38033 |
| fusarium subglutinans | 30 | species | plants | fungi | 42677 |
| cyclospora cayetanensis | 30 | species | invertebrates | protozoa | 88456 |
| trichobilharzia ocellata | 30 | species | invertebrates | helminths | 100602 |
| streptococcus anginosus | 29 | species | bacteria | bacteria | 1328 |
| eastern equine encephalitis virus | 29 | species | viruses | viruses | 11021 |
| human parechovirus 1 | 29 | no rank | viruses | viruses | 12063 |
| saccharopolyspora rectivirgula | 29 | species | bacteria | bacteria | 28042 |
| cladosporium cladosporioides | 29 | species | plants | fungi | 29917 |
| human coronavirus oc43 | 29 | no rank | viruses | viruses | 31631 |
| babesia gibsoni | 29 | species | invertebrates | protozoa | 33632 |
| epidermophyton floccosum | 29 | species | plants | fungi | 34391 |