| aspergillus fisherianus | -3 | species | | fungi | |
| ancylostoma malayanum | 1 | species | | helminths | |
| aspergillus terreus group | -3 | species | | fungi | |
| diphyllobothrium mansonoides | -3 | species | | helminths | |
| echinochasmus jiufoensis | -3 | species | | helminths | |
| dipetalonema arbuta | -3 | species | | helminths | |
| dipetalonema reconditum | 13 | species | | helminths | |
| diphyllobothrium cameroni | -3 | species | | helminths | |
| diphyllobothrium erinaceieuropaei | -3 | species | | helminths | |
| chaetophoma dermo-unguis | -3 | species | | fungi | |
| trichostrongylus brevis | -3 | species | | helminths | |
| rhabditis elongata | -3 | species | | helminths | |
| pyramicocephalus anthocephalus | -3 | species | | helminths | |
| phoma hibernica | 2 | species | | fungi | |
| phoma minutella | 1 | species | | fungi | |
| plagiorchis javensis | -3 | species | | helminths | |
| psilorchis hominis | -3 | species | | helminths | |
| ovadendron sulphureo-ochraceum | 5 | species | | fungi | |
| mansonella semiclarum | -3 | species | | helminths | |
| multiceps glomeratus | -3 | species | | helminths | |
| issyk-kul virus | 2 | species | | viruses | 1453408 |
| eucoleus aerophilus | 7 | species | | helminths | 1237089 |
| gigantobilharzia huttoni | 1 | species | | helminths | |
| alaria americana | 2 | species | | helminths | |
| candiru virus complex | -3 | no rank | | viruses | |
| carneocephallus brevicaea | -1 | species | | helminths | |
| echinochasmus japonicus | 4 | species | | helminths | 1197313 |
| diphyllobothrium dalliae | -3 | species | | helminths | |
| trichostrongylus orientalis | 1 | species | | helminths | |
| trubanaman virus | 2 | species | | viruses | 1678230 |
| rhinocladiella obovoidea | -3 | species | | fungi | |
| rhinocladiella schulzeri | 1 | species | | fungi | |
| rotavirus e | 4 | species | | viruses | |
| scopulariopsis candida | 3 | species | | fungi | 186344 |
| raillietina demerariensis | 1 | species | | helminths | |
| rhabditis pellio | 5 | species | | helminths | |
| nematodirus abnormalis | 2 | species | | helminths | |
| metagonimus minutus | -3 | species | | helminths | |
| mansonella streptocerca | 5 | species | | helminths | |
| gigantobilharzia sturniae | -3 | species | | helminths | |
| calodium hepaticum | 4 | species | | helminths | |
| centrocestus armatus | 3 | species | | helminths | |
| diplogonoporus fukuokaensis | -3 | species | | helminths | |
| drepanidotaenia lanceolata | 2 | species | | helminths | 1732538 |
| diphyllobothrium hians | -3 | species | | helminths | |
| diphyllobothrium orcini | -3 | species | | helminths | |
| cylindrocarpon vaginae | -3 | species | | fungi | |
| multiceps brauni | -3 | species | | helminths | |
| nosema connori | 4 | species | | fungi | |
| mammomonogamus nasicola | 1 | species | | helminths | |
| mathevotaenia symmetrica | -3 | species | | helminths | 1573891 |
| mesocestoides variabilis | 2 | species | | helminths | |
| mammomonogamus laryngeus | 2 | species | | helminths | |
| dissitimurus exedrus | -3 | species | | fungi | |
| echinostoma macrorchis | 2 | species | | helminths | |
| fibricola seoulensis | 1 | species | | helminths | |
| episthmium caninum | -3 | species | | helminths | |
| fasciola indica | 3 | species | | helminths | |
| physaloptera transfuga | -3 | species | | helminths | |
| paragonimus hueitungensis | 1 | species | | helminths | |
| nosema ceylonensis | -3 | species | | fungi | |
| macracanthorhynchus hirudinaceus | 11 | species | | helminths | 1032456 |
| metorchis conjunctus | 3 | species | | helminths | |
| echinochasmus perfoliatus | 3 | species | | helminths | |
| diphyllobothrium theileri | -3 | species | | helminths | |
| heterophyes dispar | 1 | species | | helminths | |
| orungo virus | 4 | species | | viruses | 40058 |
| multiceps serialis | 4 | species | | helminths | |
| moraxella liquefaciens | 2 | species | | bacteria | |
| multiceps longihamatus | 1 | species | | helminths | |
| mansonella rodhaini | -3 | species | | helminths | |
| meningonema peruzii | 1 | species | | helminths | |
| lanjan virus | 1 | species | | viruses | 1564119 |
| lebombo virus | -3 | species | | viruses | 40057 |
| dirofilaria subdermata | 2 | species | | helminths | |
| diphyllobothrium elegans | 1 | species | | helminths | |
| echinostoma ilocanum | 1 | species | | helminths | |
| echinostoma cinetorchis | 3 | species | | helminths | 1873862 |
| borreliella burgdorferi | 144 | species | bacteria | bacteria | 139 |
| borrelia hermsii | 44 | species | bacteria | bacteria | 140 |
| borrelia parkeri | 13 | species | bacteria | bacteria | 141 |
| borrelia turicatae | 21 | species | bacteria | bacteria | 142 |
| treponema pallidum | 87 | species | bacteria | bacteria | 160 |
| leptospira interrogans | 49 | species | bacteria | bacteria | 173 |
| leptospira borgpetersenii | 18 | species | bacteria | bacteria | 174 |
| campylobacter coli | 65 | species | bacteria | bacteria | 195 |
| campylobacter fetus | 57 | species | bacteria | bacteria | 196 |
| campylobacter jejuni | 130 | species | bacteria | bacteria | 197 |
| campylobacter hyointestinalis | 23 | species | bacteria | bacteria | 198 |
| campylobacter concisus | 20 | species | bacteria | bacteria | 199 |
| campylobacter curvus | 11 | species | bacteria | bacteria | 200 |
| campylobacter lari | 35 | species | bacteria | bacteria | 201 |
| campylobacter rectus | 41 | species | bacteria | bacteria | 203 |
| campylobacter sputorum | 22 | species | bacteria | bacteria | 206 |
| helicobacter pylori | 246 | species | bacteria | bacteria | 210 |
| helicobacter cinaedi | 27 | species | bacteria | bacteria | 213 |
| helicobacter fennelliae | 16 | species | bacteria | bacteria | 215 |
| elizabethkingia meningoseptica | 44 | species | bacteria | bacteria | 238 |
| chryseobacterium balustinum | 10 | species | bacteria | bacteria | 246 |
| myroides odoratus | 15 | species | bacteria | bacteria | 256 |