| collinsella aerofaciens | 19 | species | bacteria | bacteria | 74426 |
| mannheimia haemolytica | 67 | species | bacteria | bacteria | 75985 |
| alloprevotella tannerae | 7 | species | bacteria | bacteria | 76122 |
| prevotella enoeca | 2 | species | bacteria | bacteria | 76123 |
| streptococcus constellatus | 25 | species | bacteria | bacteria | 76860 |
| streptomyces somaliensis | 10 | species | bacteria | bacteria | 78355 |
| delftia acidovorans | 40 | species | bacteria | bacteria | 80866 |
| centipeda periodontii | 7 | species | bacteria | bacteria | 82203 |
| tatumella ptyseos | 2 | species | bacteria | bacteria | 82987 |
| serratia plymuthica | 24 | species | bacteria | bacteria | 82996 |
| eubacterium multiforme | 2 | species | bacteria | bacteria | 83339 |
| chlamydia psittaci | 63 | species | bacteria | bacteria | 83554 |
| chlamydia pneumoniae | 143 | species | bacteria | bacteria | 83558 |
| eggerthella lenta | 23 | species | bacteria | bacteria | 84112 |
| achromobacter xylosoxidans | 45 | species | bacteria | bacteria | 85698 |
| moraxella lincolnii | 1 | species | bacteria | bacteria | 90241 |
| oligella ureolytica | 3 | species | bacteria | bacteria | 90244 |
| oligella urethralis | 12 | species | bacteria | bacteria | 90245 |
| salmonella enterica subsp. enterica serovar typhi | 85 | no rank | bacteria | bacteria | 90370 |
| salmonella enterica subsp. enterica serovar typhimurium | 77 | no rank | bacteria | bacteria | 90371 |
| edwardsiella hoshinae | 5 | species | bacteria | bacteria | 93378 |
| proteus penneri | 16 | species | bacteria | bacteria | 102862 |
| actinomadura pelletieri | 8 | species | bacteria | bacteria | 111805 |
| pseudoramibacter alactolyticus | 13 | species | bacteria | bacteria | 113287 |
| providencia alcalifaciens | 15 | species | bacteria | bacteria | 126385 |
| actinomyces radingae | 5 | species | bacteria | bacteria | 131110 |
| actinomyces turicensis | 8 | species | bacteria | bacteria | 131111 |
| citrobacter youngae | 5 | species | bacteria | bacteria | 133448 |
| selenomonas dianae | 3 | species | bacteria | bacteria | 135079 |
| selenomonas flueggei | 5 | species | bacteria | bacteria | 135080 |
| selenomonas infelix | 6 | species | bacteria | bacteria | 135082 |
| selenomonas noxia | 11 | species | bacteria | bacteria | 135083 |
| filifactor alocis | 16 | species | bacteria | bacteria | 143361 |
| [eubacterium] sulci | 5 | species | bacteria | bacteria | 143393 |
| leifsonia aquatica | 19 | species | bacteria | bacteria | 144185 |
| salmonella enterica subsp. enterica serovar enteritidis | 87 | no rank | bacteria | bacteria | 149539 |
| cedecea davisae | 3 | species | bacteria | bacteria | 158484 |
| cedecea neteri | 2 | species | bacteria | bacteria | 158822 |
| cedecea lapagei | 2 | species | bacteria | bacteria | 158823 |
| enterobacter hormaechei | 11 | species | bacteria | bacteria | 158836 |
| megamonas hypermegale | 5 | species | bacteria | bacteria | 158847 |
| pasteurella caballi | 6 | species | bacteria | bacteria | 243701 |
| [bacteroides] pectinophilus | 1 | species | bacteria | bacteria | 384638 |
| bacteroides galacturonicus | 1 | species | bacteria | bacteria | 384639 |
| lachnoanaerobaculum saburreum | 14 | species | bacteria | bacteria | 467210 |
| selenomonas artemidis | 6 | species | bacteria | bacteria | 671224 |
| treponema carateum | 1 | species | | bacteria | |
| spirillum minus | 5 | species | | bacteria | |
| moraxella liquefaciens | 2 | species | | bacteria | |
| pneumocystis carinii | 148 | species | plants | fungi | 4754 |
| rhizomucor miehei | 59 | species | plants | fungi | 4839 |
| rhizomucor pusillus | 30 | species | plants | fungi | 4840 |
| mucor racemosus | 26 | species | plants | fungi | 4841 |
| rhizopus stolonifer | 43 | species | plants | fungi | 4846 |
| pichia kudriavzevii | 67 | species | plants | fungi | 4909 |
| kluyveromyces marxianus | 50 | species | plants | fungi | 4911 |
| pichia norvegensis | 14 | species | plants | fungi | 4921 |
| wickerhamomyces anomalus | 41 | species | plants | fungi | 4927 |
| meyerozyma guilliermondii | 42 | species | plants | fungi | 4929 |
| saccharomyces cerevisiae | 584 | species | plants | fungi | 4932 |
| yarrowia lipolytica | 63 | species | plants | fungi | 4952 |
| histoplasma capsulatum | 72 | species | plants | fungi | 5037 |
| blastomyces dermatitidis | 50 | species | plants | fungi | 5039 |
| sarocladium strictum | 17 | species | plants | fungi | 5046 |
| aspergillus clavatus | 21 | species | plants | fungi | 5057 |
| aspergillus niger | 110 | species | plants | fungi | 5061 |
| aspergillus oryzae | 67 | species | plants | fungi | 5062 |
| aspergillus wentii | 21 | species | plants | fungi | 5066 |
| penicillium chrysogenum | 74 | species | plants | fungi | 5076 |
| penicillium citrinum | 40 | species | plants | fungi | 5077 |
| cryptococcus neoformans | 126 | species | plants | fungi | 5207 |
| schizophyllum commune | 74 | species | plants | fungi | 5334 |
| coprinopsis cinerea | 61 | species | plants | fungi | 5346 |
| candida albicans | 181 | species | plants | fungi | 5476 |
| [candida] glabrata | 87 | species | plants | fungi | 5478 |
| candida parapsilosis | 68 | species | plants | fungi | 5480 |
| candida rugosa | 67 | species | plants | fungi | 5481 |
| candida tropicalis | 76 | species | plants | fungi | 5482 |
| candida viswanathii | 7 | species | plants | fungi | 5486 |
| candida magnoliae | 18 | species | plants | fungi | 5490 |
| [candida] zeylanoides | 17 | species | plants | fungi | 5493 |
| coccidioides immitis | 54 | species | plants | fungi | 5501 |
| curvularia lunata | 34 | species | plants | fungi | 5503 |
| fusarium oxysporum | 93 | species | plants | fungi | 5507 |
| microdochium nivale | 32 | species | plants | fungi | 5520 |
| rhodotorula glutinis | 38 | species | plants | fungi | 5535 |
| rhodotorula mucilaginosa | 30 | species | plants | fungi | 5537 |
| thermomyces lanuginosus | 49 | species | plants | fungi | 5541 |
| trichoderma viride | 64 | species | plants | fungi | 5547 |
| trichophyton rubrum | 48 | species | plants | fungi | 5551 |
| trichosporon beigelii | 40 | species | plants | fungi | 5553 |
| cutaneotrichosporon cutaneum | 38 | species | plants | fungi | 5554 |
| aureobasidium pullulans | 46 | species | plants | fungi | 5580 |
| exophiala jeanselmei | 26 | species | plants | fungi | 5584 |
| microascus cirrosus | 3 | species | plants | fungi | 5595 |
| scedosporium boydii | 48 | species | plants | fungi | 5597 |
| alternaria alternata | 56 | species | plants | fungi | 5599 |
| exophiala dermatitidis | 42 | species | plants | fungi | 5970 |
| encephalitozoon cuniculi | 58 | species | plants | fungi | 6035 |
| penicillium expansum | 46 | species | plants | fungi | 27334 |