| peptococcus niger | 8 | species | bacteria | bacteria | 2741 |
| burkholderia mallei | 27 | species | bacteria | bacteria | 13373 |
| acinetobacter lwoffii | 27 | species | bacteria | bacteria | 28090 |
| capnocytophaga canimorsus | 18 | species | bacteria | bacteria | 28188 |
| burkholderia pseudomallei | 61 | species | bacteria | bacteria | 28450 |
| salmonella enterica | 107 | species | bacteria | bacteria | 28901 |
| mycobacterium haemophilum | 26 | species | bacteria | bacteria | 29311 |
| staphylococcus saprophyticus | 42 | species | bacteria | bacteria | 29385 |
| brucella melitensis | 52 | species | bacteria | bacteria | 29459 |
| brucella suis | 38 | species | bacteria | bacteria | 29461 |
| clavibacter michiganensis subsp. sepedonicus | 25 | subspecies | bacteria | bacteria | 31964 |
| anaerococcus prevotii | 17 | species | bacteria | bacteria | 33034 |
| streptococcus milleri | 39 | species | bacteria | bacteria | 33040 |
| candidatus liberibacter africanus | 9 | species | bacteria | bacteria | 34020 |
| candidatus liberibacter asiaticus | 17 | species | bacteria | bacteria | 34021 |
| streptobacillus moniliformis | 20 | species | bacteria | bacteria | 34105 |
| mycobacterium abscessus | 38 | species | bacteria | bacteria | 36809 |
| brucella canis | 26 | species | bacteria | bacteria | 36855 |
| nocardia nova | 13 | species | bacteria | bacteria | 37330 |
| corynebacterium jeikeium | 22 | species | bacteria | bacteria | 38289 |
| bartonella henselae | 77 | species | bacteria | bacteria | 38323 |
| veillonella dispar | 17 | species | bacteria | bacteria | 39778 |
| acinetobacter radioresistens | 23 | species | bacteria | bacteria | 40216 |
| stenotrophomonas maltophilia | 80 | species | bacteria | bacteria | 40324 |
| mycoplasma capricolum subsp. capripneumoniae | 11 | subspecies | bacteria | bacteria | 40480 |
| rickettsia felis | 29 | species | bacteria | bacteria | 42862 |
| pseudomonas alcaligenes | 25 | species | bacteria | bacteria | 43263 |
| pseudoalteromonas tetraodonis | 9 | species | bacteria | bacteria | 43659 |
| corynebacterium amycolatum | 18 | species | bacteria | bacteria | 43765 |
| rhodococcus equi | 50 | species | bacteria | bacteria | 43767 |
| borrelia recurrentis | 21 | species | bacteria | bacteria | 44449 |
| salmonella enterica subsp. enterica serovar paratyphi a | 22 | no rank | bacteria | bacteria | 54388 |
| salmonella bongori | 18 | species | bacteria | bacteria | 54736 |
| xanthomonas oryzae pv. oryzae | 48 | no rank | bacteria | bacteria | 64187 |
| streptococcus viridans | 35 | species | bacteria | bacteria | 78535 |
| parachlamydia acanthamoebae | 20 | species | bacteria | bacteria | 83552 |
| chlamydia psittaci | 63 | species | bacteria | bacteria | 83554 |
| chlamydia pneumoniae | 143 | species | bacteria | bacteria | 83558 |
| xanthomonas citri subsp. malvacearum | 22 | subspecies | bacteria | bacteria | 86040 |
| salmonella enterica subsp. enterica serovar typhi | 85 | no rank | bacteria | bacteria | 90370 |
| salmonella enterica subsp. enterica serovar typhimurium | 77 | no rank | bacteria | bacteria | 90371 |
| ralstonia mannitolilytica | 9 | species | bacteria | bacteria | 105219 |
| acinetobacter calcoaceticus subsp. anitratus | 23 | subspecies | bacteria | bacteria | 107673 |
| xanthomonas oryzae pv. oryzicola | 12 | no rank | bacteria | bacteria | 129394 |
| salmonella enterica subsp. enterica serovar enteritidis | 87 | no rank | bacteria | bacteria | 149539 |
| haemophilus aegyptius | 17 | species | bacteria | bacteria | 197575 |
| enterococcus casseliflavus ec30 | -1 | no rank | bacteria | bacteria | 565652 |
| spirillum minus | 5 | species | | bacteria | |
| filobasidiella neoformans | 25 | species | | | |