| varestrongylus pneumonicus | 1 | species | | helminths | |
| trichuris sylvilagi | 1 | species | | helminths | |
| tetrameres confusa | 1 | species | | helminths | |
| eimeria pacifica | 1 | species | | protozoa | |
| eimeria christianseni | 1 | species | | protozoa | |
| wehrdikmansia cervipedis | 1 | species | | helminths | |
| trichuris serrata | 1 | species | | helminths | 1610522 |
| trimenopon hispidum | 1 | species | | | |
| neocuterebra squamosa | 1 | species | | fly | |
| mammomonogamus auris | 1 | species | | helminths | |
| longistrongylus meyeri | 1 | species | | helminths | |
| eimeria punoensis | 1 | species | | protozoa | |
| capillaria tomentosa | 1 | species | | helminths | |
| eimeria kofoidi | 1 | species | | protozoa | |
| eimeria magnalabia | 1 | species | | protozoa | |
| eimeria bonasae | 1 | species | | protozoa | |
| eimeria dolichotis | 1 | species | | protozoa | |
| eimeria angusta | 1 | species | | protozoa | |
| mesogyna hepatica | 1 | species | | helminths | |
| nematodirella longispiculata | 1 | species | | helminths | |
| bourgelatia diducta | 1 | species | | helminths | |
| eimeria yakimoffmatschoulskyi | 1 | species | | protozoa | |
| eimeria montanaensis | 1 | species | | protozoa | |
| eimeria mrigai | 1 | species | | protozoa | |
| eimeria gazella | 1 | species | | protozoa | |
| dracunculus globocephalus | 1 | species | | helminths | |
| cobboldia elephantis | 1 | species | | fly | |
| skrjabinagia boevi | 1 | species | | helminths | |
| murshidia murshida | 1 | species | | helminths | |
| nematodirella dromedarii | 1 | species | | helminths | |
| aelurostrongylus falciformis | 1 | species | | helminths | |
| amidostomum skrjabini | 1 | species | | helminths | |
| eimeria perminuta | 1 | species | | protozoa | |
| eimeria rajasthani | 1 | species | | protozoa | |
| eimeria dromedarii | 1 | species | | protozoa | |
| pneumospirura rodentium | 1 | species | | helminths | |
| oxyspirura mansoni | 1 | species | | helminths | |
| ornithofilaria fallisensis | 1 | species | | helminths | |
| babesia berbera | 1 | species | | protozoa | |
| eimeria pellerdyi | 1 | species | | protozoa | |
| eimeria procera | 1 | species | | protozoa | |
| chrysops discalis | 1 | species | | fly | |
| dipetalonema odendhali | 1 | species | | helminths | |
| eimeria mayurai | 1 | species | | protozoa | |
| eimeria danailovi | 1 | species | | protozoa | |
| eimeria tetricis | 1 | species | | protozoa | |
| eimeria oreamni | 1 | species | | protozoa | |
| metathelazia californica | 1 | species | | helminths | |
| eimeria battakhi | 1 | species | | protozoa | |
| eimeria gilruthi | 1 | species | | protozoa | |
| eimeria elegans | 1 | species | | protozoa | |
| eimeria dalli | 1 | species | | protozoa | |
| heterodoxus longitarsus | 1 | species | | | |
| cylicodontophorus mettami | -3 | species | invertebrates | helminths | 74593 |
| cyathostomum labratum | -3 | species | invertebrates | helminths | 74784 |
| rhabditoides inermis | -3 | species | invertebrates | helminths | 96661 |
| naegleria philippinensis | -3 | species | invertebrates | protozoa | 160659 |
| human enteric coronavirus 4408 | -3 | no rank | viruses | viruses | 166124 |
| gyropus ovalis | -3 | species | invertebrates | | 209364 |
| chicken enteric coronavirus | -3 | species | viruses | viruses | 229103 |
| trypanosoma rabinowitschae | -3 | species | invertebrates | protozoa | 267967 |
| cyrnea mansioni | -3 | species | invertebrates | helminths | 291938 |
| mouse adeno-associated virus 1 | -3 | species | viruses | viruses | 341226 |
| porcine type-c oncovirus | -3 | species | viruses | viruses | 369960 |
| haemoproteus danilewskyii | -3 | species | invertebrates | protozoa | 379419 |
| ovine mastadenovirus b | -3 | species | viruses | viruses | 389483 |
| triodontophorus brevicauda | -3 | species | invertebrates | helminths | 1628841 |
| tetrameres fissipina | -3 | species | invertebrates | helminths | 435743 |
| mycoplasma mucosicanis | -3 | species | bacteria | bacteria | 458208 |
| porcine picobirnavirus 1 | -3 | species | viruses | viruses | 464983 |
| chicken astrovirus 2 | -3 | species | viruses | viruses | 544801 |
| chicken astrovirus 1 | -3 | no rank | viruses | viruses | 544802 |
| morellia aenescens | -3 | species | invertebrates | fly | 559657 |
| morellia hortorum | -3 | species | invertebrates | fly | 559658 |
| morellia simplex | -3 | species | invertebrates | fly | 559659 |
| human cosavirus a | -3 | no rank | viruses | viruses | 586419 |
| hmo astrovirus a | -3 | species | viruses | viruses | 682382 |
| cyclovirus ng12 | -3 | species | viruses | viruses | 742922 |
| human stool-associated circular virus ng13 | -3 | species | viruses | viruses | 743300 |
| brachyspira rattus | -3 | species | bacteria | bacteria | 797076 |
| brachyspira muridarum | -3 | species | bacteria | bacteria | 797079 |
| brachyspira muris | -3 | species | bacteria | bacteria | 797080 |
| mlv-related virus cfs | -3 | no rank | viruses | viruses | 878322 |
| necropsobacter rosorum | -3 | species | bacteria | bacteria | 908285 |
| eimeria moschati | -3 | species | | protozoa | |
| eimeria nazijrovi | -3 | species | | protozoa | |
| eimeria ovibovis | -3 | species | | protozoa | |
| trypanosoma diasi | -3 | species | | protozoa | |
| trichomitus fecalis | -3 | species | | protozoa | |
| tyzzeria alleni | -3 | species | | protozoa | |
| tyzzeria pellerdyi | -3 | species | | protozoa | |
| trichodectes climax | -3 | species | | | |
| trichodectes limbatus | -3 | species | | | |
| trichodectes sphaerocephalus | -3 | species | | | |
| capillaria intestinalis | -3 | species | | helminths | |
| bovicola painei | -3 | species | | | |
| capillaria annulosa | -3 | species | | helminths | |
| tetratrichomonas pavlovi | -3 | species | | protozoa | |
| skrjabinagylus petrowi | -3 | species | | helminths | |
| sarcocystis bigemina | -3 | species | | protozoa | |