| filaroides cebus | 1 | species | | helminths | |
| physaloptera pseudopraeputialis | 1 | species | | helminths | |
| otobius lagophilus | 1 | species | | tick | |
| paracooperia nodulosa | 1 | species | | helminths | |
| paragonimus hueitungensis | 1 | species | | helminths | |
| onchocerca tubingensis | 1 | species | | helminths | |
| ostertagia orloffi | 1 | species | | helminths | |
| demodex cuniculi | 1 | species | | | |
| demodex phylloides | 1 | species | | | |
| hyalomma impressum | 1 | species | | tick | |
| hymenolepis cantaniana | 1 | species | | helminths | |
| heterophyes dispar | 1 | species | | helminths | |
| gurltia paralysans | 1 | species | | helminths | 1280927 |
| haemaphysalis chordeilis | 1 | species | | tick | |
| epidermoptes bilobatus | 1 | species | | | |
| eimeria matsubayashii | 1 | species | | protozoa | |
| onchocerca reticulata | 1 | species | | helminths | |
| onchocerca sweetae | 1 | species | | helminths | |
| multiceps longihamatus | 1 | species | | helminths | |
| meningonema peruzii | 1 | species | | helminths | |
| lanjan virus | 1 | species | | viruses | 1564119 |
| diphyllobothrium elegans | 1 | species | | helminths | |
| dipetalonema marmosetae | 1 | species | | helminths | |
| echinostoma ilocanum | 1 | species | | helminths | |
| hippobosca capensis | 1 | species | | fly | |
| euryhelmis monorchis | 1 | species | | helminths | |
| carneocephallus brevicaea | -1 | species | | helminths | |
| echinostoma jassyense | -1 | species | invertebrates | helminths | |
| bisgaard taxon 2 | -3 | species | bacteria | bacteria | 28157 |
| venezuelan equine encephalitis virus (strain everglades fe3-7c) | -3 | no rank | viruses | viruses | 36383 |
| spanish sheep encephalitis virus | -3 | species | viruses | viruses | 41408 |
| turkish sheep encephalitis virus | -3 | no rank | viruses | viruses | 47300 |
| rhipicephalus decoloratus | -3 | species | invertebrates | tick | 60189 |
| hu39694 virus | -3 | no rank | viruses | viruses | 69244 |
| oran virus | -3 | no rank | viruses | viruses | 69247 |
| human erythrovirus v9 | -3 | species | viruses | viruses | 72197 |
| leishmania braziliensis guyanensis | -3 | subspecies | invertebrates | protozoa | 87235 |
| brazilian caprine lentivirus | -3 | species | viruses | viruses | 89592 |
| chlamydoabsidia padenii | -3 | species | plants | fungi | 90267 |
| porcine mastadenovirus a | -3 | species | viruses | viruses | 130369 |
| sabo virus | -3 | no rank | viruses | viruses | 159138 |
| mycobacterium tuberculosis 210 | -3 | no rank | bacteria | bacteria | 164513 |
| strongyloides fuelleborni fuelleborni | -3 | subspecies | invertebrates | helminths | 174722 |
| rotavirus f | -3 | species | viruses | viruses | 183405 |
| giardia lamblia atcc 50803 | -3 | no rank | invertebrates | protozoa | 184922 |
| hepatitis e virus type 1 | -3 | no rank | viruses | viruses | 185579 |
| scopulariopsis asperula | -3 | species | plants | fungi | 186356 |
| scopulariopsis fusca | -3 | species | plants | fungi | 186361 |
| sanguinicola cf. inermis | -3 | species | invertebrates | helminths | 232606 |
| sapovirus mc114 | -3 | no rank | viruses | viruses | 234603 |
| psittacid herpesvirus 3 | -3 | species | viruses | viruses | 240876 |
| psittacid herpesvirus 4 | -3 | species | viruses | viruses | 240877 |
| measles virus genotype a | -3 | no rank | viruses | viruses | 262307 |
| sarcoptes scabiei type chimp | -3 | no rank | invertebrates | | 268762 |
| sarcoptes scabiei type wallaby | -3 | no rank | invertebrates | | 268763 |
| pneumonia virus of mice j3666 | -3 | no rank | viruses | viruses | 270473 |
| cryptosporidium struthionis | -3 | species | invertebrates | protozoa | 272794 |
| fort sherman virus | -3 | no rank | viruses | viruses | 273345 |
| xingu virus | -3 | no rank | viruses | viruses | 273348 |
| seoul virus bjhd01 | -3 | no rank | viruses | viruses | 280855 |
| porrocaecum crassum | -3 | species | invertebrates | helminths | 290549 |
| leptospira interrogans serovar szwajizak | -3 | no rank | bacteria | bacteria | 312177 |
| calliphora fallax | -3 | species | invertebrates | fly | 318689 |
| burkholderia mallei nctc 10247 | -3 | no rank | bacteria | bacteria | 320389 |
| kappapapillomavirus | -3 | genus | viruses | | 325457 |
| zetapapillomavirus | -3 | genus | viruses | | 333918 |
| mupapillomavirus | -3 | genus | viruses | | 334202 |
| thetapapillomavirus | -3 | genus | viruses | | 334213 |
| rotavirus d | -3 | species | viruses | viruses | 335100 |
| avian nephritis virus 1 | -3 | no rank | viruses | viruses | 336960 |
| burkholderia pseudomallei 1106b | -3 | no rank | bacteria | bacteria | 357347 |
| diphyllobothrium lanceolatum | -3 | species | invertebrates | helminths | 372084 |
| myxobolus dujardini | -3 | species | invertebrates | | 378072 |
| sars coronavirus gdh-bjh01 | -3 | no rank | viruses | viruses | 388737 |
| murine rotavirus a | -3 | no rank | viruses | viruses | 418976 |
| west nile virus h442 | -3 | no rank | viruses | viruses | 449280 |
| hantaanvirus cghu1 | -3 | no rank | viruses | viruses | 470918 |
| analges passerinus | -3 | species | invertebrates | | 474139 |
| nupapillomavirus | -3 | genus | viruses | | 475861 |
| leptospira wolffii serovar khorat | -3 | no rank | bacteria | bacteria | 479645 |
| clostridioides difficile cip 107932 | -3 | no rank | bacteria | bacteria | 499176 |
| yersinia pestis biovar medievalis str. harbin 35 | -3 | no rank | bacteria | bacteria | 547048 |
| infectious bursal disease virus beh2003 | -3 | no rank | viruses | viruses | 551140 |
| pleurophoma pleurospora | -3 | species | plants | fungi | 565432 |
| streptococcus pneumoniae ap200 | -3 | no rank | bacteria | bacteria | 574093 |
| feline poxvirus ita2_bc | -3 | species | viruses | viruses | 580061 |
| murine coronavirus inf-mhv-a59 | -3 | no rank | viruses | viruses | 591071 |
| caprine arthritis encephalitis virus ov496 | -3 | no rank | viruses | viruses | 621214 |
| candiru virus | -3 | species | viruses | viruses | 629725 |
| alenquer virus | -3 | no rank | viruses | viruses | 629726 |
| legionella longbeachae d-4968 | -3 | no rank | bacteria | bacteria | 638315 |
| canine papillomavirus 5 | -3 | no rank | viruses | viruses | 658422 |
| giardia lamblia p15 | -3 | no rank | invertebrates | protozoa | 658858 |
| wohlfahrtia nuba | -3 | species | invertebrates | fly | 670615 |
| vibrio mimicus mb451 | -3 | no rank | bacteria | bacteria | 675806 |
| rhodococcus equi 103s | -3 | no rank | bacteria | bacteria | 685727 |
| salivirus mn-2a | -3 | species | viruses | viruses | 688450 |
| sandfly fever turkey virus | -3 | no rank | viruses | viruses | 688699 |
| escherichia coli o157:h7 str. ec4009 | -3 | no rank | bacteria | bacteria | 702430 |
| listeria monocytogenes fsl f2-208 | -3 | no rank | bacteria | bacteria | 702458 |