| cyanobacterium | 151 | genus | bacteria | | 102234 |
| proteus penneri | 16 | species | bacteria | bacteria | 102862 |
| tenacibaculum | 11 | genus | bacteria | | 104267 |
| salmonella enterica subsp. enterica serovar newport | 26 | no rank | bacteria | bacteria | 108619 |
| leifsonia | 14 | genus | bacteria | | 110932 |
| actinomadura pelletieri | 8 | species | bacteria | bacteria | 111805 |
| pseudoramibacter | 11 | genus | bacteria | | 113286 |
| pseudoramibacter alactolyticus | 13 | species | bacteria | bacteria | 113287 |
| spotted fever group | 52 | species group | bacteria | | 114277 |
| typhus group | 30 | species group | bacteria | | 114292 |
| streptococcus orisratti | 3 | species | bacteria | bacteria | 114652 |
| granulicatella | 16 | genus | bacteria | | 117563 |
| anaerorhabdus | 1 | genus | bacteria | | 118966 |
| streptococcus dysgalactiae subsp. equisimilis | 31 | subspecies | bacteria | bacteria | 119602 |
| pectobacterium | 21 | genus | bacteria | | 122277 |
| [actinobacillus] rossii | 5 | species | bacteria | bacteria | 123820 |
| roseomonas | 13 | genus | bacteria | | 125216 |
| providencia alcalifaciens | 15 | species | bacteria | bacteria | 126385 |
| vibrio cholerae o1 | 65 | no rank | bacteria | bacteria | 127906 |
| crossiella | 3 | genus | bacteria | | 130795 |
| actinomyces radingae | 5 | species | bacteria | bacteria | 131110 |
| actinomyces turicensis | 8 | species | bacteria | bacteria | 131111 |
| citrobacter youngae | 5 | species | bacteria | bacteria | 133448 |
| selenomonas dianae | 3 | species | bacteria | bacteria | 135079 |
| selenomonas flueggei | 5 | species | bacteria | bacteria | 135080 |
| selenomonas infelix | 6 | species | bacteria | bacteria | 135082 |
| selenomonas noxia | 11 | species | bacteria | bacteria | 135083 |
| mycoplasma haemocanis | 14 | species | bacteria | bacteria | 136241 |
| thalassomonas | 7 | genus | bacteria | | 137583 |
| filifactor alocis | 16 | species | bacteria | bacteria | 143361 |
| [eubacterium] sulci | 5 | species | bacteria | bacteria | 143393 |
| leifsonia aquatica | 19 | species | bacteria | bacteria | 144185 |
| turicella | 11 | genus | bacteria | | 144193 |
| salmonella enterica subsp. enterica serovar enteritidis | 87 | no rank | bacteria | bacteria | 149539 |
| finegoldia | 11 | genus | bacteria | | 150022 |
| bartonella bovis | 6 | species | bacteria | bacteria | 155194 |
| gallibacterium | 6 | genus | bacteria | | 155493 |
| streptococcus entericus | 2 | species | bacteria | bacteria | 155680 |
| dysgonomonas | 4 | genus | bacteria | | 156973 |
| actinobacillus arthritidis | 4 | species | bacteria | bacteria | 157339 |
| cellulosimicrobium | 9 | genus | bacteria | | 157920 |
| cedecea | 7 | genus | bacteria | | 158483 |
| cedecea davisae | 3 | species | bacteria | bacteria | 158484 |
| cedecea neteri | 2 | species | bacteria | bacteria | 158822 |
| cedecea lapagei | 2 | species | bacteria | bacteria | 158823 |
| enterobacter hormaechei | 11 | species | bacteria | bacteria | 158836 |
| megamonas hypermegale | 5 | species | bacteria | bacteria | 158847 |
| yokenella | 8 | genus | bacteria | | 158876 |
| corynebacterium mastitidis | 2 | species | bacteria | bacteria | 161890 |
| peptoniphilus | 10 | genus | bacteria | | 162289 |
| oerskovia | 24 | genus | bacteria | | 162491 |
| mycobacterium tuberculosis 210 | -3 | no rank | bacteria | bacteria | 164513 |
| laribacter | 11 | genus | bacteria | | 168470 |
| sneathia | 8 | genus | bacteria | | 168808 |
| escherichia coli o111:h- | 5 | no rank | bacteria | bacteria | 168927 |
| ehrlichia ovina | 3 | species | bacteria | bacteria | 170541 |
| inquilinus | 13 | genus | bacteria | | 171673 |
| leptospira interrogans serovar autumnalis | 4 | no rank | bacteria | bacteria | 174157 |
| aurantimonas | 8 | genus | bacteria | | 182269 |
| anaplasma bovis | 9 | species | bacteria | bacteria | 186733 |
| actinobacillus porcitonsillarum | 4 | species | bacteria | bacteria | 189834 |
| abiotrophia para-adiacens | 2 | species | bacteria | bacteria | 191553 |
| tannerella | 29 | genus | bacteria | | 195950 |
| haemophilus aegyptius | 17 | species | bacteria | bacteria | 197575 |
| collimonas | 8 | genus | bacteria | | 202907 |
| aegyptianella | 8 | genus | bacteria | | 203861 |
| aegyptianella pullorum | 6 | species | bacteria | bacteria | 203862 |
| dickeya | 9 | genus | bacteria | | 204037 |
| brucella suis 1330 | 11 | no rank | bacteria | bacteria | 204722 |
| leptospira interrogans serovar canicola | 19 | no rank | bacteria | bacteria | 211880 |
| leptospira interrogans serovar hebdomadis | 1 | no rank | bacteria | bacteria | 211881 |
| leptospira interrogans serovar australis | 2 | no rank | bacteria | bacteria | 211882 |
| rhizobacter | 3 | genus | bacteria | | 212743 |
| histophilus | 19 | genus | bacteria | | 214906 |
| faecalibacterium | 26 | genus | bacteria | | 216851 |
| guggenheimella | 5 | genus | bacteria | | 228923 |
| pasteurella caballi | 6 | species | bacteria | bacteria | 243701 |
| bordetella pertussis tohama i | 5 | no rank | bacteria | bacteria | 257313 |
| leptospira interrogans serovar grippotyphosa | 6 | no rank | bacteria | bacteria | 280498 |
| segniliparus | 2 | genus | bacteria | | 286801 |
| acaricomes | 3 | genus | bacteria | | 291967 |
| avibacterium | 4 | genus | bacteria | | 292486 |
| candidatus rhabdochlamydia | 8 | genus | bacteria | | 292833 |
| elizabethkingia | 5 | genus | bacteria | | 308865 |
| leptospira interrogans serovar szwajizak | -3 | no rank | bacteria | bacteria | 312177 |
| burkholderia mallei nctc 10247 | -3 | no rank | bacteria | bacteria | 320389 |
| parastreptomyces | 1 | genus | bacteria | | 329648 |
| candidatus rickettsia kellyi | 1 | species | bacteria | bacteria | 332615 |
| leptospira interrogans serovar bratislava | 8 | no rank | bacteria | bacteria | 338215 |
| leptospira borgpetersenii serovar hardjo-bovis | 4 | no rank | bacteria | bacteria | 338217 |
| leptospira interrogans serovar sejroe | 2 | no rank | bacteria | bacteria | 340110 |
| leptospira interrogans serovar ballum | 2 | no rank | bacteria | bacteria | 342794 |
| leptospira interrogans serovar tarassovi | 2 | no rank | bacteria | bacteria | 342795 |
| burkholderia pseudomallei 1106b | -3 | no rank | bacteria | bacteria | 357347 |
| granulibacter | 9 | genus | bacteria | | 364409 |
| escherichia coli o111:nm | 3 | no rank | bacteria | bacteria | 373045 |
| bartonella tamiae | 2 | species | bacteria | bacteria | 373638 |
| shigella flexneri 1a | 2 | no rank | bacteria | bacteria | 374923 |
| escherichia coli o103:h2 | 6 | no rank | bacteria | bacteria | 376725 |
| brachyspira suanatina | 1 | species | bacteria | bacteria | 381802 |