| pantoea | 47 | genus | bacteria | | 53335 |
| enterococcus durans | 29 | species | bacteria | bacteria | 53345 |
| enterococcus mundtii | 18 | species | bacteria | bacteria | 53346 |
| xylophilus | 28 | genus | bacteria | | 54066 |
| raoultella ornithinolytica | 8 | species | bacteria | bacteria | 54291 |
| salmonella bongori | 18 | species | bacteria | bacteria | 54736 |
| brevibacillus | 25 | genus | bacteria | | 55080 |
| mycobacterium avium-intracellulare | 20 | species | bacteria | bacteria | 55883 |
| leucobacter | 7 | genus | bacteria | | 55968 |
| mycobacterium mucogenicum | 11 | species | bacteria | bacteria | 56689 |
| mycoplasma suis | 19 | species | bacteria | bacteria | 57372 |
| microvirgula | 6 | genus | bacteria | | 57479 |
| kocuria | 25 | genus | bacteria | | 57493 |
| kytococcus | 8 | genus | bacteria | | 57499 |
| tsukamurella tyrosinosolvens | 4 | species | bacteria | bacteria | 57704 |
| citrobacter braakii | 10 | species | bacteria | bacteria | 57706 |
| candidatus phlomobacter | 9 | genus | bacteria | | 57962 |
| moritella | 15 | genus | bacteria | | 58050 |
| aranicola | 4 | genus | bacteria | | 58337 |
| rickettsiella | 14 | genus | bacteria | | 59195 |
| trueperella bernardiae | 8 | species | bacteria | bacteria | 59561 |
| chryseobacterium | 31 | genus | bacteria | | 59732 |
| empedobacter | 9 | genus | bacteria | | 59734 |
| bergeyella | 13 | genus | bacteria | | 59735 |
| sanguibacter | 6 | genus | bacteria | | 60919 |
| enterobacter asburiae | 18 | species | bacteria | bacteria | 61645 |
| lelliottia amnigena | 12 | species | bacteria | bacteria | 61646 |
| pluralibacter gergoviae | 11 | species | bacteria | bacteria | 61647 |
| serratia ficaria | 10 | species | bacteria | bacteria | 61651 |
| serratia rubidaea | 10 | species | bacteria | bacteria | 61652 |
| borreliella bissettii | 14 | species | bacteria | bacteria | 64897 |
| corynebacterium ulcerans | 18 | species | bacteria | bacteria | 65058 |
| actinoalloteichus | 5 | genus | bacteria | | 65496 |
| facklamia | 7 | genus | bacteria | | 66831 |
| citrobacter farmeri | 4 | species | bacteria | bacteria | 67824 |
| citrobacter rodentium | 45 | species | bacteria | bacteria | 67825 |
| citrobacter sedlakii | 6 | species | bacteria | bacteria | 67826 |
| citrobacter werkmanii | 4 | species | bacteria | bacteria | 67827 |
| enterobacter cancerogenus | 13 | species | bacteria | bacteria | 69218 |
| orientia | 25 | genus | bacteria | | 69474 |
| enterococcus raffinosus | 16 | species | bacteria | bacteria | 71452 |
| brenneria | 10 | genus | bacteria | | 71655 |
| waddlia | 16 | genus | bacteria | | 71666 |
| achromobacter piechaudii | 11 | species | bacteria | bacteria | 72556 |
| roseovarius | 12 | genus | bacteria | | 74030 |
| collinsella aerofaciens | 19 | species | bacteria | bacteria | 74426 |
| balneatrix | 1 | genus | bacteria | | 75683 |
| mannheimia | 34 | genus | bacteria | | 75984 |
| mannheimia haemolytica | 67 | species | bacteria | bacteria | 75985 |
| alloprevotella tannerae | 7 | species | bacteria | bacteria | 76122 |
| prevotella enoeca | 2 | species | bacteria | bacteria | 76123 |
| campylobacter hominis | 4 | species | bacteria | bacteria | 76517 |
| myroides | 10 | genus | bacteria | | 76831 |
| actinobaculum | 9 | genus | bacteria | | 76833 |
| streptococcus constellatus | 25 | species | bacteria | bacteria | 76860 |
| coenonia | 2 | genus | bacteria | | 78328 |
| mycobacterium canettii | 12 | species | bacteria | bacteria | 78331 |
| streptomyces somaliensis | 10 | species | bacteria | bacteria | 78355 |
| allomonas | 4 | genus | bacteria | | 80853 |
| delftia | 19 | genus | bacteria | | 80865 |
| delftia acidovorans | 40 | species | bacteria | bacteria | 80866 |
| centipeda | 13 | genus | bacteria | | 82202 |
| centipeda periodontii | 7 | species | bacteria | bacteria | 82203 |
| leminorella | 5 | genus | bacteria | | 82980 |
| tatumella | 7 | genus | bacteria | | 82986 |
| tatumella ptyseos | 2 | species | bacteria | bacteria | 82987 |
| serratia plymuthica | 24 | species | bacteria | bacteria | 82996 |
| escherichia coli o157:h7 | 138 | no rank | bacteria | bacteria | 83334 |
| eubacterium multiforme | 2 | species | bacteria | bacteria | 83339 |
| parachlamydia | 27 | genus | bacteria | | 83551 |
| chlamydophila | 35 | genus | bacteria | | 83553 |
| chlamydia psittaci | 63 | species | bacteria | bacteria | 83554 |
| chlamydia abortus | 63 | species | bacteria | bacteria | 83555 |
| chlamydia felis | 17 | species | bacteria | bacteria | 83556 |
| chlamydia caviae | 9 | species | bacteria | bacteria | 83557 |
| chlamydia pneumoniae | 143 | species | bacteria | bacteria | 83558 |
| leclercia | 13 | genus | bacteria | | 83654 |
| clostridium haemolyticum | 5 | species | bacteria | bacteria | 84025 |
| eggerthella lenta | 23 | species | bacteria | bacteria | 84112 |
| brachyspira intermedia | 12 | species | bacteria | bacteria | 84377 |
| brachyspira alvinipulli | 5 | species | bacteria | bacteria | 84379 |
| mannheimia glucosida | 8 | species | bacteria | bacteria | 85401 |
| mannheimia varigena | 8 | species | bacteria | bacteria | 85404 |
| photobacterium damselae subsp. damselae | 23 | subspecies | bacteria | bacteria | 85581 |
| achromobacter xylosoxidans | 45 | species | bacteria | bacteria | 85698 |
| chlamydia pecorum | 21 | species | bacteria | bacteria | 85991 |
| pasteuria | 33 | genus | bacteria | | 86004 |
| mycoplasma dispar | 19 | species | bacteria | bacteria | 86660 |
| borreliella spielmanii | 8 | species | bacteria | bacteria | 88916 |
| leptospira interrogans serovar icterohaemorrhagiae | 12 | no rank | bacteria | bacteria | 90062 |
| moraxella lincolnii | 1 | species | bacteria | bacteria | 90241 |
| oligella | 12 | genus | bacteria | | 90243 |
| oligella ureolytica | 3 | species | bacteria | bacteria | 90244 |
| oligella urethralis | 12 | species | bacteria | bacteria | 90245 |
| salmonella enterica subsp. enterica serovar typhi | 85 | no rank | bacteria | bacteria | 90370 |
| salmonella enterica subsp. enterica serovar typhimurium | 77 | no rank | bacteria | bacteria | 90371 |
| asaia | 12 | genus | bacteria | | 91914 |
| pandoraea | 15 | genus | bacteria | | 93217 |
| edwardsiella hoshinae | 5 | species | bacteria | bacteria | 93378 |
| salmonella enterica subsp. enterica serovar dublin | 55 | no rank | bacteria | bacteria | 98360 |