| [pseudomonas] geniculata | Yes | species | bacteria | bacteria | species | 86188 | click here |
| achromobacter sp. fpbbik5 | Yes | no rank | | | species | 1792867 | click here |
| acidovorax facilis | Yes | species | bacteria | bacteria | species | 12917 | click here |
| acidovorax sp. seprh9 | Yes | no rank | | | species | 1792868 | click here |
| acinetobacter baumannii | Yes | species | bacteria | bacteria | species | 470 | click here |
| acinetobacter calcoaceticus | Yes | species | bacteria | bacteria | species | 471 | click here |
| acinetobacter lactucae | Yes | species | | | species | 1785128 | click here |
| acinetobacter pittii | Yes | no rank | bacteria | bacteria | species | 48296 | click here |
| acinetobacter soli | Yes | species | bacteria | bacteria | species | 487316 | click here |
| acinetobacter sp. b1 | Yes | no rank | bacteria | bacteria | species | 482468 | click here |
| actinidia virus x | Yes | species | | | species | 1331744 | click here |
| aeromonas sp. | Yes | species | bacteria | bacteria | species | 647 | click here |
| african eggplant yellowing virus | Yes | species | | | species | 1963256 | click here |
| ageratum enation virus | Yes | species | viruses and viroids | viruses | species | 188333 | click here |
| ageratum yellow vein virus | Yes | species | viruses and viroids | viruses | species | 44560 | click here |
| agrobacterium fabrum | Yes | species | | | species | 1176649 | click here |
| agrobacterium larrymoorei | Yes | species | bacteria | bacteria | species | 160699 | click here |
| agrobacterium rhizogenes | Yes | species | bacteria | bacteria | species | 359 | click here |
| agrobacterium tumefaciens | Yes | species | bacteria | bacteria | species | 358 | click here |
| agrococcus lahaulensis | Yes | species | bacteria | bacteria | species | 341722 | click here |
| albifimbria terrestris | Yes | species | | | species | 1859698 | click here |
| alcaligenes endophyticus | Yes | species | | | species | 1929088 | click here |
| alcaligenes faecalis | Yes | species | bacteria | bacteria | species | 511 | click here |
| aleurothrixus trachoides | Yes | species | | | species | 2710796 | click here |
| aleurotrachelus trachoides | Yes | species | | | species | 594464 | click here |
| alfalfa mosaic virus | Yes | species | viruses and viroids | viruses | species | 12321 | click here |
| alstroemeria necrotic streak virus | Yes | no rank | viruses and viroids | viruses | no rank | 693450 | click here |
| alternaria alternata | Yes | species | eukaryota | plants | species | 5599 | click here |
| alternaria argyroxiphii | Yes | species | | | species | 1187903 | click here |
| alternaria capsici-annui | Yes | no rank | | | species | 1342361 | click here |
| alternaria chartarum | Yes | species | eukaryota | plants | species | 119957 | click here |
| alternaria compacta | Yes | species | eukaryota | plants | species | 167739 | click here |
| alternaria concatenata | Yes | species | eukaryota | plants | species | 1342382 | click here |
| alternaria crassa | Yes | species | eukaryota | plants | species | 119918 | click here |
| alternaria linariae | Yes | species | | | species | 1568907 | click here |
| alternaria passiflorae | Yes | species | eukaryota | plants | species | 378260 | click here |
| alternaria porri | Yes | species | eukaryota | plants | species | 48098 | click here |
| alternaria solani | Yes | species | eukaryota | plants | species | 48100 | click here |
| alternaria sp. | Yes | species | | | species | 1715220 | click here |
| alternaria sp. kalunitd30 | Yes | no rank | | | species | 1550752 | click here |
| alternaria sp. l1(2015) | Yes | no rank | | | species | 1641731 | click here |
| alternaria sp. td10 | Yes | no rank | | | species | 1495494 | click here |
| alternaria sp. td2 | Yes | no rank | | | species | 1495495 | click here |
| aminobacter sp. hpsrk2 | Yes | no rank | | | species | 1792869 | click here |
| aphis gossypii | Yes | species | eukaryota | invertebrates | species | 80765 | click here |
| arsenicicoccus sp. b16 | Yes | no rank | bacteria | bacteria | species | 482469 | click here |
| arsenophonus endosymbiont of bemisia tabaci | Yes | no rank | bacteria | bacteria | species | 536059 | click here |
| arthrinium rasikravindrii | Yes | no rank | eukaryota | plants | species | 990691 | click here |
| arthrobacter citreus | Yes | species | bacteria | bacteria | species | 1670 | click here |
| arthrobacter sp. | Yes | species | bacteria | bacteria | species | 1667 | click here |
| ascomycota sp. | Yes | species | | | species | 1709939 | click here |
| ascomycota sp. pp-2011 | Yes | no rank | eukaryota | plants | species | 945227 | click here |
| aspergillus brasiliensis | Yes | species | eukaryota | plants | species | 319629 | click here |
| aspergillus dimorphicus | Yes | species | eukaryota | plants | species | 36641 | click here |
| aspergillus flavus | Yes | species | eukaryota | plants | species | 5059 | click here |
| aspergillus foveolatus | Yes | species | eukaryota | plants | species | 210207 | click here |
| aspergillus fumigatus | Yes | species | eukaryota | plants | species | 746128 | click here |
| aspergillus luchuensis | Yes | species | | | species | 1069201 | click here |
| aspergillus melleus | Yes | species | eukaryota | plants | species | 138277 | click here |
| aspergillus niger | Yes | species | eukaryota | plants | species | 5061 | click here |
| aspergillus parasiticus | Yes | species | eukaryota | plants | species | 5067 | click here |
| aspergillus pseudoglaucus | Yes | species | | | species | 1405805 | click here |
| aspergillus sp. | Yes | no rank | eukaryota | plants | species | 5065 | click here |
| aspergillus versicolor | Yes | species | eukaryota | plants | species | 46472 | click here |
| asphondylia capsicicola | Yes | species | | | species | 1871105 | click here |
| asphondylia gennadii | Yes | species | eukaryota | invertebrates | species | 197032 | click here |
| athelia rolfsii | Yes | species | eukaryota | plants | species | 39291 | click here |
| aulacorthum solani | Yes | species | eukaryota | invertebrates | species | 202456 | click here |
| aureimonas ureilytica | Yes | species | bacteria | bacteria | species | 401562 | click here |
| azotobacter vinelandii | Yes | species | bacteria | bacteria | species | 354 | click here |
| bacillus acidiceler | Yes | species | bacteria | bacteria | species | 371036 | click here |
| bacillus aerophilus | Yes | species | bacteria | bacteria | species | 293389 | click here |
| bacillus altitudinis | Yes | species | bacteria | bacteria | species | 293387 | click here |
| bacillus amyloliquefaciens | Yes | species | bacteria | bacteria | species | 1390 | click here |
| bacillus anthracis | Yes | species | bacteria | bacteria | species | 1392 | click here |
| bacillus aquimaris | Yes | species | bacteria | bacteria | species | 189382 | click here |
| bacillus aryabhattai | Yes | species | bacteria | bacteria | species | 412384 | click here |
| bacillus bataviensis | Yes | species | bacteria | bacteria | species | 220685 | click here |
| bacillus cereus | Yes | species | bacteria | bacteria | species | 1396 | click here |
| bacillus endophyticus | Yes | species | bacteria | bacteria | species | 135735 | click here |
| bacillus firmus | Yes | species | bacteria | bacteria | species | 1399 | click here |
| bacillus licheniformis | Yes | species | bacteria | bacteria | species | 1402 | click here |
| bacillus megaterium | Yes | species | bacteria | bacteria | species | 1404 | click here |
| bacillus mycoides | Yes | species | bacteria | bacteria | species | 1405 | click here |
| bacillus nealsonii | Yes | species | bacteria | bacteria | species | 115979 | click here |
| bacillus niacini | Yes | species | bacteria | bacteria | species | 86668 | click here |
| bacillus pumilus | Yes | species | bacteria | bacteria | species | 1408 | click here |
| bacillus safensis | Yes | species | bacteria | bacteria | species | 561879 | click here |
| bacillus siamensis | Yes | no rank | bacteria | bacteria | species | 659243 | click here |
| bacillus simplex | Yes | species | bacteria | bacteria | species | 1478 | click here |
| bacillus soli | Yes | species | bacteria | bacteria | species | 220688 | click here |
| bacillus sp. | Yes | species | bacteria | bacteria | species | 1409 | click here |
| bacillus sp. c12 | Yes | no rank | bacteria | bacteria | species | 495051 | click here |
| bacillus sp. c13 | Yes | no rank | bacteria | bacteria | species | 495052 | click here |
| bacillus sp. c19(2008) | Yes | no rank | bacteria | bacteria | species | 495079 | click here |
| bacillus sp. c2(2008) | Yes | no rank | bacteria | bacteria | species | 495076 | click here |
| bacillus sp. c20 | Yes | no rank | bacteria | bacteria | species | 495053 | click here |
| bacillus sp. c22 | Yes | no rank | bacteria | bacteria | species | 495054 | click here |
| bacillus sp. c23 | Yes | no rank | bacteria | bacteria | species | 495055 | click here |
| bacillus sp. c25 | Yes | no rank | bacteria | bacteria | species | 495056 | click here |