| agrobacterium rhizogenes | No | species | bacteria | bacteria | species | 359 | click here |
| agrobacterium tumefaciens | No | species | bacteria | bacteria | species | 358 | click here |
| almond witches'-broom phytoplasma | No | species | bacteria | bacteria | species | 183583 | click here |
| apple chlorotic leaf spot virus | No | species | viruses and viroids | viruses | species | 12175 | click here |
| apricot pseudo-chlorotic leaf spot virus | No | species | viruses and viroids | viruses | species | 307677 | click here |
| candidatus phytoplasma mali | No | subspecies | bacteria | bacteria | species | 37692 | click here |
| candidatus phytoplasma phoenicium | No | subspecies | bacteria | bacteria | species | 198422 | click here |
| candidatus phytoplasma solani | No | subspecies | bacteria | bacteria | species | 69896 | click here |
| cherry green ring mottle virus | No | species | viruses and viroids | viruses | species | 65467 | click here |
| colletotrichum fructicola | No | species | eukaryota | plants | species | 690256 | click here |
| colletotrichum nymphaeae | No | species | eukaryota | plants | species | 306554 | click here |
| collophora rubra | No | species | eukaryota | plants | species | 744434 | click here |
| coniochaeta prunicola | No | species | eukaryota | plants | species | 744408 | click here |
| cytospora austromontana | No | species | eukaryota | plants | species | 351595 | click here |
| dactylonectria torresensis | No | species | | | species | 1199091 | click here |
| diaporthe aspalathi | No | species | eukaryota | plants | species | 626713 | click here |
| diaporthe foeniculina | No | species | eukaryota | plants | species | 1469663 | click here |
| didymosphaeria variabile | No | species | | | species | 1932322 | click here |
| diplodia seriata | No | species | eukaryota | plants | species | 420778 | click here |
| geotrichum candidum | No | species | | | species | 1173061 | click here |
| ilyonectria sp. | No | species | | | species | 1755430 | click here |
| komagataeibacter hansenii | No | species | bacteria | bacteria | species | 436 | click here |
| komagataeibacter oboediens | No | species | bacteria | bacteria | species | 65958 | click here |
| komagataeibacter sucrofermentans | No | species | | | species | 1053551 | click here |
| lasiodiplodia sp. | No | species | | | species | 1891967 | click here |
| lasiodiplodia theobromae | No | species | eukaryota | plants | species | 45133 | click here |
| mesocriconema xenoplax | No | species | eukaryota | invertebrates | species | 211171 | click here |
| monilinia fructicola | No | species | eukaryota | plants | species | 38448 | click here |
| monilinia laxa | No | species | eukaryota | plants | species | 61186 | click here |
| nectria cinnabarina | No | species | eukaryota | plants | species | 29855 | click here |
| novosphingobium sp. | No | species | | | species | 1874826 | click here |
| pantoea sp. | No | species | bacteria | bacteria | species | 69393 | click here |
| paratylenchus tenuicaudatus | No | species | | | species | 1830329 | click here |
| peach latent mosaic viroid | No | species | viruses and viroids | viruses | species | 12894 | click here |
| peach little leaf yellowing phytoplasma | No | species | | | species | 1469404 | click here |
| penicillium crustosum | No | species | eukaryota | plants | species | 36656 | click here |
| penicillium digitatum | No | species | eukaryota | plants | species | 36651 | click here |
| penicillium expansum | No | species | eukaryota | plants | species | 27334 | click here |
| penicillium solitum | No | species | eukaryota | plants | species | 60172 | click here |
| phaeoacremonium iranianum | No | species | eukaryota | plants | species | 344976 | click here |
| phytophthora citrophthora | No | species | eukaryota | plants | species | 4793 | click here |
| pleurostoma richardsiae | No | species | eukaryota | plants | species | 41990 | click here |
| plum bark necrosis stem pitting-associated virus | No | species | viruses and viroids | viruses | species | 675077 | click here |
| plum pox virus | No | species | viruses and viroids | viruses | species | 12211 | click here |
| prunus necrotic ringspot virus | No | species | viruses and viroids | viruses | species | 37733 | click here |
| pseudomonas syringae pv. syringae | No | no rank | bacteria | bacteria | no rank | 321 | click here |
| serratia odorifera | No | species | bacteria | bacteria | species | 618 | click here |
| sphingomonas paucimobilis | No | species | bacteria | bacteria | species | 13689 | click here |
| sphingomonas sp. | No | no rank | bacteria | bacteria | species | 28214 | click here |
| thelonectria veuillotiana | No | species | eukaryota | plants | species | 144050 | click here |
| thyrostroma carpophilum | No | species | eukaryota | plants | species | 763997 | click here |
| trichothecium roseum | No | species | eukaryota | plants | species | 47278 | click here |
| truncatella angustata | No | species | eukaryota | plants | species | 152316 | click here |
| valsa sordida | No | species | eukaryota | plants | species | 252740 | click here |
| xanthomonas arboricola pv. pruni | No | no rank | bacteria | bacteria | no rank | 69929 | click here |