| [candida] carpophila | Yes | species | eukaryota | plants | species | 374178 | click here |
| [candida] rancensis | Yes | species | eukaryota | plants | species | 208486 | click here |
| acephala sp. | Yes | species | | | species | 1881142 | click here |
| acephala sp. 2 | Yes | no rank | eukaryota | plants | species | 519220 | click here |
| acephala sp. 3 | Yes | no rank | eukaryota | plants | species | 519221 | click here |
| achromobacter spanius | Yes | species | bacteria | bacteria | species | 217203 | click here |
| agaricales sp. fg2v1c | Yes | no rank | eukaryota | plants | species | 758580 | click here |
| agaricales sp. gf8v1e | Yes | no rank | eukaryota | plants | species | 758581 | click here |
| agrobacterium rhizogenes | Yes | species | bacteria | bacteria | species | 359 | click here |
| agrobacterium rubi | Yes | species | bacteria | bacteria | species | 28099 | click here |
| agrobacterium tumefaciens | Yes | species | bacteria | bacteria | species | 358 | click here |
| allantophomopsis cytisporea | Yes | species | | | species | 1484957 | click here |
| allantophomopsis lunata | Yes | species | | | species | 1663484 | click here |
| allantophomopsis lycopodina | Yes | species | eukaryota | plants | species | 334518 | click here |
| alternaria alternata | Yes | species | eukaryota | plants | species | 5599 | click here |
| alternaria arborescens | Yes | species | eukaryota | plants | species | 156630 | click here |
| alternaria infectoria | Yes | species | eukaryota | plants | species | 45303 | click here |
| alternaria parvicaespitosa | Yes | species | | | species | 1978312 | click here |
| alternaria sp. | Yes | species | | | species | 1715220 | click here |
| alternaria sp. mirt9 | Yes | no rank | | | species | 1503358 | click here |
| alternaria tenuissima | Yes | species | eukaryota | plants | species | 119927 | click here |
| annulohypoxylon truncatum | Yes | species | eukaryota | plants | species | 327061 | click here |
| aonidiella ensifera | Yes | species | | | species | 2006680 | click here |
| aphis vaccinii | Yes | species | eukaryota | invertebrates | species | 994505 | click here |
| arcopilus cupreus | Yes | species | | | species | 1934356 | click here |
| arthrobacter bambusae | Yes | species | | | species | 1338426 | click here |
| aspergillus fumigatus | Yes | species | eukaryota | plants | species | 746128 | click here |
| aspergillus oryzae | Yes | species | eukaryota | plants | species | 5062 | click here |
| aspergillus sp. | Yes | no rank | eukaryota | plants | species | 5065 | click here |
| aspergillus versicolor | Yes | species | eukaryota | plants | species | 46472 | click here |
| aster yellows phytoplasma | Yes | subspecies | bacteria | bacteria | species | 35779 | click here |
| aureobasidium pullulans | Yes | species | eukaryota | plants | species | 5580 | click here |
| axenic ericoid root isolate (cf. lachnum pygmaeum) | Yes | no rank | eukaryota | plants | species | 186304 | click here |
| axenic ericoid root isolate (cf. rhizoscyphus ericae aggregate) | Yes | no rank | eukaryota | plants | species | 186448 | click here |
| bacillus amyloliquefaciens | Yes | species | bacteria | bacteria | species | 1390 | click here |
| bacillus bataviensis | Yes | species | bacteria | bacteria | species | 220685 | click here |
| bacillus cereus | Yes | species | bacteria | bacteria | species | 1396 | click here |
| bacillus novalis | Yes | species | bacteria | bacteria | species | 220687 | click here |
| bacillus sp. | Yes | species | bacteria | bacteria | species | 1409 | click here |
| bacterium enrichment culture | Yes | subspecies | bacteria | bacteria | species | 207831 | click here |
| biscogniauxia mediterranea | Yes | species | eukaryota | plants | species | 97377 | click here |
| biscogniauxia sp. | Yes | species | | | species | 1896107 | click here |
| bjerkandera adusta | Yes | species | eukaryota | plants | species | 5331 | click here |
| blueberry fruit drop associated virus | Yes | species | | | species | 1751715 | click here |
| blueberry green mosaic associated virus | Yes | species | | | species | 2605718 | click here |
| blueberry latent virus | Yes | species | viruses and viroids | viruses | species | 430710 | click here |
| blueberry leaf mottle virus | Yes | species | viruses and viroids | viruses | species | 38172 | click here |
| blueberry mosaic associated ophiovirus | Yes | species | | | species | 2170044 | click here |
| blueberry mosaic associated virus | Yes | no rank | | | no rank | 1520332 | click here |
| blueberry necrotic ring blotch virus | Yes | species | | | species | 1094249 | click here |
| blueberry red ringspot virus | Yes | species | viruses and viroids | viruses | species | 172220 | click here |
| blueberry scorch virus | Yes | species | viruses and viroids | viruses | species | 31722 | click here |
| blueberry shock virus | Yes | species | viruses and viroids | viruses | species | 747056 | click here |
| blueberry shoestring virus | Yes | species | | viruses | species | 1714570 | click here |
| blueberry stunt phytoplasma | Yes | subspecies | bacteria | bacteria | species | 37695 | click here |
| blueberry virus a | Yes | species | | | species | 1206566 | click here |
| boeremia exigua | Yes | species | eukaryota | plants | species | 749465 | click here |
| botryosphaeria corticis | Yes | species | eukaryota | plants | species | 120389 | click here |
| botryosphaeria dothidea | Yes | species | eukaryota | plants | species | 55169 | click here |
| botrytis cinerea | Yes | species | eukaryota | plants | species | 40559 | click here |
| botrytis sp. | Yes | species | | | species | 1849799 | click here |
| botrytis sp. x004 | Yes | no rank | | | species | 1520260 | click here |
| botrytis sp. x010 | Yes | no rank | | | species | 1520261 | click here |
| botrytis sp. x029 | Yes | no rank | | | species | 1520262 | click here |
| botrytis sp. x1303 | Yes | no rank | | | species | 1520263 | click here |
| brevipalpus yothersi | Yes | species | | | species | 1754060 | click here |
| byssochlamys spectabilis | Yes | species | eukaryota | plants | species | 264951 | click here |
| cadophora luteo-olivacea | Yes | species | eukaryota | plants | species | 227289 | click here |
| cadophora orchidicola | Yes | species | eukaryota | plants | species | 1732013 | click here |
| cadophora sp. | Yes | species | | | species | 1755420 | click here |
| calonectria canadiana | Yes | species | | | species | 1985604 | click here |
| calonectria colhounii | Yes | species | eukaryota | plants | species | 131350 | click here |
| calonectria ilicicola | Yes | species | eukaryota | plants | species | 182845 | click here |
| candida sp. lmf-17 | Yes | no rank | | | species | 1906318 | click here |
| candidatus phytoplasma asteris -related phytoplasma | Yes | species | | | species | 2213006 | click here |
| candidatus phytoplasma hispanicum | Yes | species | bacteria | bacteria | species | 67685 | click here |
| candidatus phytoplasma phoenicium | Yes | subspecies | bacteria | bacteria | species | 198422 | click here |
| capnodiales sp. | Yes | species | | | species | 1756098 | click here |
| ceroplastes sp. i pa-2017 | Yes | no rank | | | species | 2006678 | click here |
| chaetomium aureum | Yes | species | eukaryota | plants | species | 79815 | click here |
| chaetomium sp. | Yes | species | | | species | 1769349 | click here |
| chaetothyriomycetidae sp. | Yes | species | | | species | 1769350 | click here |
| cherry leaf roll virus | Yes | species | viruses and viroids | viruses | species | 12615 | click here |
| chondrostereum purpureum | Yes | species | eukaryota | plants | species | 58369 | click here |
| citrus exocortis viroid | Yes | species | viruses and viroids | viruses | species | 12890 | click here |
| cladophialophora sp. | Yes | species | | | species | 1715224 | click here |
| cladosporium cladosporioides | Yes | species | eukaryota | plants | species | 29917 | click here |
| cladosporium pseudocladosporioides | Yes | species | eukaryota | plants | species | 887100 | click here |
| cladosporium sp. | Yes | species | | | species | 1707700 | click here |
| cladosporium sphaerospermum | Yes | species | eukaryota | plants | species | 92950 | click here |
| clonostachys pseudochroleuca | Yes | species | eukaryota | plants | species | 160302 | click here |
| coleophoma empetri | Yes | species | eukaryota | plants | species | 582885 | click here |
| colletotrichum acutatum | Yes | species | eukaryota | plants | species | 27357 | click here |
| colletotrichum aenigma | Yes | species | | | species | 1215731 | click here |
| colletotrichum chrysophilum | Yes | species | | | species | 1836956 | click here |
| colletotrichum fioriniae | Yes | species | eukaryota | plants | species | 710243 | click here |
| colletotrichum fructicola | Yes | species | eukaryota | plants | species | 690256 | click here |
| colletotrichum fructivorum | Yes | species | | | species | 1304674 | click here |
| colletotrichum gloeosporioides | Yes | species | eukaryota | plants | species | 474922 | click here |
| colletotrichum helleniense | Yes | species | | | species | 2016315 | click here |