| african cassava mosaic virus | Yes | species | viruses and viroids | viruses | species | 10817 | click here |
| ageratum yellow leaf curl pakistan alphasatellite | Yes | species | | | species | 1631261 | click here |
| ageratum yellow vein india alphasatellite | Yes | species | | | species | 1407058 | click here |
| agrobacterium tumefaciens | Yes | species | bacteria | bacteria | species | 358 | click here |
| albifimbria verrucaria | Yes | species | eukaryota | plants | species | 1859699 | click here |
| alpha proteobacterium be2-cafa1a-y | Yes | no rank | | | species | 1416811 | click here |
| alternaria alternata | Yes | species | eukaryota | plants | species | 5599 | click here |
| alternaria arborescens | Yes | species | eukaryota | plants | species | 156630 | click here |
| alternaria brassicicola | Yes | species | eukaryota | plants | species | 29001 | click here |
| alternaria cassiae | Yes | species | eukaryota | plants | species | 470690 | click here |
| alternaria sennae | Yes | species | | | species | 1568915 | click here |
| alternaria sp. | Yes | species | | | species | 1715220 | click here |
| alternaria sp. cl-7 | Yes | no rank | | | species | 679983 | click here |
| alternaria tenuissima | Yes | species | eukaryota | plants | species | 119927 | click here |
| ascomycota sp. | Yes | species | | | species | 1709939 | click here |
| aspergillus caespitosus | Yes | species | eukaryota | plants | species | 176165 | click here |
| aspergillus clavatus | Yes | species | eukaryota | plants | species | 5057 | click here |
| aspergillus flavus | Yes | species | eukaryota | plants | species | 5059 | click here |
| aspergillus minisclerotigenes | Yes | species | eukaryota | plants | species | 656917 | click here |
| aspergillus nomius | Yes | species | eukaryota | plants | species | 41061 | click here |
| aspergillus oryzae | Yes | species | eukaryota | plants | species | 5062 | click here |
| aspergillus sp. | Yes | no rank | eukaryota | plants | species | 5065 | click here |
| aspergillus striatus | Yes | species | eukaryota | plants | species | 469280 | click here |
| aspergillus tamarii | Yes | species | eukaryota | plants | species | 41984 | click here |
| bacillus haynesii | Yes | species | | | species | 1925021 | click here |
| bacillus megaterium | Yes | species | bacteria | bacteria | species | 1404 | click here |
| bacillus sp. ct3(2014) | Yes | no rank | | | species | 1476426 | click here |
| bacillus sp. lw2-cafa2-y | Yes | no rank | | | species | 1416823 | click here |
| bacillus subtilis | Yes | species | bacteria | bacteria | species | 1423 | click here |
| bean yellow mosaic virus | Yes | species | viruses and viroids | viruses | species | 12197 | click here |
| beauveria bassiana | Yes | species | eukaryota | plants | species | 176275 | click here |
| botryosphaeria dothidea | Yes | species | eukaryota | plants | species | 55169 | click here |
| brachypeplus sp. irdcs1 | Yes | no rank | | | species | 1550791 | click here |
| brachypeplus sp. irdcs2 | Yes | no rank | | | species | 1550792 | click here |
| bradyrhizobium elkanii | Yes | species | bacteria | bacteria | species | 29448 | click here |
| bradyrhizobium genosp. v | Yes | no rank | bacteria | bacteria | species | 216382 | click here |
| bradyrhizobium genosp. w | Yes | no rank | bacteria | bacteria | species | 286732 | click here |
| bradyrhizobium genosp. z | Yes | no rank | bacteria | bacteria | species | 286734 | click here |
| bradyrhizobium iriomotense | Yes | species | bacteria | bacteria | species | 441950 | click here |
| bradyrhizobium sp. | Yes | species | bacteria | bacteria | species | 376 | click here |
| bradyrhizobium sp. arr596 | Yes | no rank | | | species | 1534882 | click here |
| bradyrhizobium sp. arr709 | Yes | no rank | | | species | 1070055 | click here |
| bradyrhizobium sp. bruesc1014 | Yes | no rank | | | species | 1755300 | click here |
| bradyrhizobium sp. bruesc955 | Yes | no rank | | | species | 1755301 | click here |
| bradyrhizobium sp. bruesc960 | Yes | no rank | | | species | 1755302 | click here |
| bradyrhizobium sp. bruesc965 | Yes | no rank | | | species | 1755303 | click here |
| bradyrhizobium sp. bruesc967 | Yes | no rank | | | species | 1755304 | click here |
| bradyrhizobium sp. bruesc968 | Yes | no rank | | | species | 1755305 | click here |
| bradyrhizobium sp. cbr5 | Yes | no rank | | | species | 1178960 | click here |
| bradyrhizobium sp. cf1 | Yes | no rank | bacteria | bacteria | species | 368069 | click here |
| bradyrhizobium sp. cf3.6 | Yes | no rank | | | species | 1089478 | click here |
| bradyrhizobium sp. cf36 | Yes | no rank | | | species | 1178962 | click here |
| bradyrhizobium sp. cf4 | Yes | no rank | | | species | 1089479 | click here |
| bradyrhizobium sp. cf7 | Yes | no rank | bacteria | bacteria | species | 370338 | click here |
| bradyrhizobium sp. cfb11 | Yes | no rank | | | species | 1561408 | click here |
| bradyrhizobium sp. cfb17 | Yes | no rank | | | species | 1178963 | click here |
| bradyrhizobium sp. cfb38 | Yes | no rank | | | species | 1178964 | click here |
| bradyrhizobium sp. cfhr.1a | Yes | no rank | | | species | 1089497 | click here |
| bradyrhizobium sp. cfrr1 | Yes | no rank | | | species | 1089498 | click here |
| bradyrhizobium sp. cfs4 | Yes | no rank | | | species | 1089499 | click here |
| bradyrhizobium sp. cfs5 | Yes | no rank | | | species | 1089500 | click here |
| bradyrhizobium sp. cna3 | Yes | no rank | | | species | 1089504 | click here |
| bradyrhizobium sp. cnc25 | Yes | no rank | | | species | 1178965 | click here |
| bradyrhizobium sp. cnf2 | Yes | no rank | | | species | 1178966 | click here |
| bradyrhizobium sp. cng5 | Yes | no rank | | | species | 1425222 | click here |
| bradyrhizobium sp. cng8 | Yes | no rank | | | species | 1425223 | click here |
| bradyrhizobium sp. cnp5 | Yes | no rank | | | species | 1425224 | click here |
| bradyrhizobium sp. cnp7 | Yes | no rank | | | species | 1425225 | click here |
| bradyrhizobium sp. cnp8 | Yes | no rank | | | species | 1425226 | click here |
| bradyrhizobium sp. cnw15 | Yes | no rank | | | species | 1089505 | click here |
| bradyrhizobium sp. cp1(2014) | Yes | no rank | | | species | 1526865 | click here |
| bradyrhizobium sp. jnvu cp19 | Yes | no rank | | | species | 1547178 | click here |
| bradyrhizobium sp. jnvu cp24 | Yes | no rank | | | species | 1547179 | click here |
| bradyrhizobium sp. jnvu cp29 | Yes | no rank | | | species | 1640614 | click here |
| bradyrhizobium sp. jnvu cp30 | Yes | no rank | | | species | 1547180 | click here |
| bradyrhizobium sp. lw3-cafa1-wa | Yes | no rank | | | species | 1416830 | click here |
| bradyrhizobium sp. ors 1844 | Yes | no rank | bacteria | bacteria | species | 187036 | click here |
| bradyrhizobium sp. ors 1896 | Yes | no rank | bacteria | bacteria | species | 186889 | click here |
| bradyrhizobium sp. picf1 | Yes | no rank | | | species | 1179048 | click here |
| bradyrhizobium sp. picf10 | Yes | no rank | | | species | 1179049 | click here |
| bradyrhizobium sp. picf9 | Yes | no rank | | | species | 1179050 | click here |
| bradyrhizobium sp. ufla03-321 | Yes | no rank | | | species | 1419277 | click here |
| brevibacillus sp. lw2-cafa1-w | Yes | no rank | | | species | 1416831 | click here |
| bruchidius dialii | Yes | species | eukaryota | invertebrates | species | 298063 | click here |
| calonectria ilicicola | Yes | species | eukaryota | plants | species | 182845 | click here |
| candida tropicalis | Yes | species | eukaryota | plants | species | 5482 | click here |
| candidatus phytoplasma omanense | Yes | subspecies | bacteria | bacteria | species | 467744 | click here |
| caryedon gonagra | Yes | species | eukaryota | invertebrates | species | 254160 | click here |
| caryedon serratus | Yes | species | eukaryota | invertebrates | species | 64408 | click here |
| cassia mild mosaic virus | Yes | species | viruses and viroids | viruses | species | 742819 | click here |
| cassia yellow mosaic-associated virus | Yes | species | | | species | 1127492 | click here |
| cassia yellow spot virus | Yes | species | viruses and viroids | viruses | species | 742822 | click here |
| chaetosphaeriaceae sp. | Yes | species | | | species | 1896340 | click here |
| cladosporium rectoides | Yes | species | eukaryota | plants | species | 887101 | click here |
| cladosporium sp. | Yes | species | | | species | 1707700 | click here |
| coccus hesperidum | Yes | species | eukaryota | invertebrates | species | 538890 | click here |
| coccus longulus | Yes | species | | | species | 1204341 | click here |
| colletotrichum capsici | Yes | species | eukaryota | plants | species | 5456 | click here |
| colletotrichum cf. siamense bds-2013 | Yes | no rank | | | species | 1347810 | click here |
| colletotrichum fructicola | Yes | species | eukaryota | plants | species | 690256 | click here |