| achromobacter mucicolens | Yes | species | | | species | 1389922 | click here |
| aeromonas dhakensis | Yes | species | bacteria | bacteria | species | 196024 | click here |
| aeromonas schubertii | Yes | species | bacteria | bacteria | species | 652 | click here |
| aeromonas veronii | Yes | species | bacteria | bacteria | species | 654 | click here |
| aliivibrio fischeri | Yes | species | bacteria | bacteria | species | 668 | click here |
| bacillus bataviensis | Yes | species | bacteria | bacteria | species | 220685 | click here |
| bacillus cereus | Yes | species | bacteria | bacteria | species | 1396 | click here |
| bacillus pumilus | Yes | species | bacteria | bacteria | species | 1408 | click here |
| bacillus sp. b3.10.2b | Yes | no rank | | | species | 1380754 | click here |
| bacillus subtilis | Yes | species | bacteria | bacteria | species | 1423 | click here |
| bacillus velezensis | Yes | species | bacteria | bacteria | species | 492670 | click here |
| caulobacter sp. snf09 | Yes | no rank | | | species | 1780188 | click here |
| citrobacter amalonaticus | Yes | species | bacteria | bacteria | species | 35703 | click here |
| citrobacter freundii | Yes | species | bacteria | bacteria | species | 546 | click here |
| decapod hepandensovirus 1 | Yes | species | | | species | 1513202 | click here |
| decapod penstyldensovirus 1 | No | species | | | species | 1513224 | click here |
| decapod penstyldensovirus 1 | Yes | species | | | species | 1513224 | click here |
| enterococcus faecalis | Yes | species | bacteria | bacteria | species | 1351 | click here |
| enterocytozoon hepatopenaei | Yes | species | eukaryota | plants | species | 646526 | click here |
| exiguobacterium sp. pm2 | Yes | no rank | | | species | 1194411 | click here |
| fenneropenaeus chinensis hepandensovirus | Yes | no rank | viruses and viroids | viruses | no rank | 797418 | click here |
| fusarium incarnatum | Yes | species | eukaryota | plants | species | 298378 | click here |
| gilbertella persicaria | Yes | species | eukaryota | plants | species | 101096 | click here |
| gill-associated virus | Yes | species | viruses and viroids | viruses | species | 96491 | click here |
| gill-associated virus genotype 2 | Yes | no rank | viruses and viroids | viruses | no rank | 557593 | click here |
| gill-associated virus genotype 3 | Yes | no rank | viruses and viroids | viruses | no rank | 557594 | click here |
| gill-associated virus genotype 4 | Yes | no rank | viruses and viroids | viruses | no rank | 557595 | click here |
| gill-associated virus genotype 5 | Yes | no rank | viruses and viroids | viruses | no rank | 557596 | click here |
| gill-associated virus genotype 6 | Yes | no rank | viruses and viroids | viruses | no rank | 557597 | click here |
| hematodinium sp. | Yes | no rank | eukaryota | plants | species | 173654 | click here |
| idiomarina sp. gus1 | Yes | no rank | bacteria | bacteria | species | 861385 | click here |
| infectious hypodermal and hematopoietic necrosis virus | Yes | no rank | viruses and viroids | viruses | species | 111792 | click here |
| klebsiella pneumoniae | Yes | species | bacteria | bacteria | species | 573 | click here |
| lactococcus lactis | Yes | species | bacteria | bacteria | species | 1358 | click here |
| laem singh virus | Yes | species | viruses and viroids | viruses | species | 691504 | click here |
| monodon slow growth-associated virus | Yes | species | | | species | 660572 | click here |
| mourilyan virus | Yes | species | viruses and viroids | viruses | species | 325212 | click here |
| mycoplasma monodon | Yes | species | bacteria | bacteria | species | 71665 | click here |
| penaeus merguiensis densovirus | Yes | species | viruses and viroids | viruses | species | 139034 | click here |
| penaeus monodon circovirus vn11 | Yes | species | | | species | 1419711 | click here |
| penaeus monodon densovirus | Yes | species | | | species | 2770846 | click here |
| penaeus monodon endogenous nimavirus | Yes | species | | | species | 2133795 | click here |
| penaeus monodon hepandensovirus 1 | Yes | no rank | | | no rank | 1513204 | click here |
| penaeus monodon hepandensovirus 2 | Yes | no rank | | | no rank | 1513206 | click here |
| penaeus monodon hepandensovirus 3 | Yes | no rank | | | no rank | 1513207 | click here |
| penaeus monodon hepatopancreatic parvovirus | Yes | species | viruses and viroids | viruses | species | 182788 | click here |
| penaeus monodon metallodensovirus | Yes | species | | | species | 2672571 | click here |
| penaeus monodon nonoccluded baculovirus iii | Yes | no rank | viruses and viroids | viruses | no rank | 46615 | click here |
| penaeus monodon nucleopolyhedrovirus | Yes | species | viruses and viroids | viruses | species | 259389 | click here |
| penaeus monodon nudivirus | Yes | species | | | species | 1529056 | click here |
| penaeus stylirostris densovirus | Yes | species | | | species | 1593240 | click here |
| perezia sp. 06-324 | Yes | no rank | | | species | 1643297 | click here |
| photobacterium damselae subsp. damselae | Yes | subspecies | bacteria | bacteria | subspecies | 85581 | click here |
| proteus mirabilis | Yes | species | bacteria | bacteria | species | 584 | click here |
| proteus sp. b3.10.2 | Yes | no rank | | | species | 1298813 | click here |
| proteus sp. b3.10a | Yes | no rank | | | species | 1298814 | click here |
| proteus sp. b3.7.1 | Yes | no rank | | | species | 1380760 | click here |
| proteus sp. b3.7a | Yes | no rank | | | species | 1380761 | click here |
| providencia sp. b3.7.4 | Yes | no rank | | | species | 1298822 | click here |
| pseudomonas aeruginosa | Yes | species | bacteria | bacteria | species | 287 | click here |
| red tail virus | Yes | species | viruses and viroids | viruses | species | 884614 | click here |
| shewanella indica | Yes | no rank | bacteria | bacteria | species | 768528 | click here |
| shrimp white spot syndrome virus | Yes | no rank | viruses and viroids | viruses | no rank | 92652 | click here |
| spawner-isolated mortality virus | Yes | species | viruses and viroids | viruses | species | 207679 | click here |
| taura syndrome virus | Yes | species | viruses and viroids | viruses | species | 142102 | click here |
| uncultured bacillus sp. | Yes | no rank | bacteria | environmental samples | species | 83428 | click here |
| uncultured bacterium | Yes | no rank | bacteria | environmental samples | species | 77133 | click here |
| uncultured clostridium sp. | Yes | no rank | bacteria | environmental samples | species | 59620 | click here |
| vibrio alginolyticus | Yes | species | bacteria | bacteria | species | 663 | click here |
| vibrio azureus | Yes | species | bacteria | bacteria | species | 512649 | click here |
| vibrio campbellii | Yes | species | bacteria | bacteria | species | 680 | click here |
| vibrio chagasii | Yes | species | bacteria | bacteria | species | 170679 | click here |
| vibrio cholerae | Yes | species | bacteria | bacteria | species | 666 | click here |
| vibrio coralliilyticus | Yes | species | bacteria | bacteria | species | 190893 | click here |
| vibrio diazotrophicus | Yes | species | bacteria | bacteria | species | 685 | click here |
| vibrio ezurae | Yes | species | bacteria | bacteria | species | 252583 | click here |
| vibrio fluvialis | Yes | species | bacteria | bacteria | species | 676 | click here |
| vibrio fortis | Yes | species | bacteria | bacteria | species | 212667 | click here |
| vibrio gallicus | Yes | species | bacteria | bacteria | species | 190897 | click here |
| vibrio gazogenes | Yes | species | bacteria | bacteria | species | 687 | click here |
| vibrio harveyi | Yes | species | bacteria | bacteria | species | 669 | click here |
| vibrio hepatarius | Yes | species | bacteria | bacteria | species | 171383 | click here |
| vibrio mediterranei | Yes | species | bacteria | bacteria | species | 689 | click here |
| vibrio natriegens | Yes | species | bacteria | bacteria | species | 691 | click here |
| vibrio nereis | Yes | species | bacteria | bacteria | species | 693 | click here |
| vibrio owensii | Yes | species | bacteria | bacteria | species | 696485 | click here |
| vibrio owensii 47666-1 | Yes | no rank | | | no rank | 1344582 | click here |
| vibrio owensii caim 1854 = lmg 25443 | Yes | no rank | | | no rank | 1229493 | click here |
| vibrio parahaemolyticus | Yes | species | bacteria | bacteria | species | 670 | click here |
| vibrio proteolyticus | Yes | species | bacteria | bacteria | species | 671 | click here |
| vibrio sp. 260(2010) | Yes | no rank | bacteria | bacteria | species | 759289 | click here |
| vibrio sp. 294(2010) | Yes | no rank | bacteria | bacteria | species | 759277 | click here |
| vibrio splendidus | Yes | species | bacteria | bacteria | species | 29497 | click here |
| vibrio tubiashii | Yes | species | bacteria | bacteria | species | 29498 | click here |
| vibrio vulnificus | Yes | species | bacteria | bacteria | species | 672 | click here |
| wenzhou shrimp virus 1 | Yes | no rank | | | no rank | 1608095 | click here |
| whenzhou shrimp virus 2 | Yes | species | | | species | 1608096 | click here |
| white spot syndrome virus | Yes | species | | viruses | species | 342409 | click here |
| yellow head virus | Yes | no rank | viruses and viroids | viruses | no rank | 96029 | click here |
| yellow head virus 3 | Yes | no rank | | | no rank | 2250121 | click here |