| acaulospora viridis | Yes | species | | | species | 1385717 | click here |
| aceria tuberculata | Yes | species | | | species | 1670717 | click here |
| 'achillea millefolium' yellows phytoplasma | Yes | species | | | species | 1232628 | click here |
| 'achillea sp.' phytoplasma | Yes | no rank | | | species | 1899419 | click here |
| achromobacter sp. dt 2-04 | Yes | no rank | | | species | 1533939 | click here |
| acidovorax sp. ct 6-07 | Yes | no rank | | | species | 1533942 | click here |
| acremonium cereale | Yes | species | eukaryota | plants | species | 706488 | click here |
| acremonium sclerotigenum | Yes | species | eukaryota | plants | species | 261921 | click here |
| acremonium sp. (in: hypocreales) | Yes | no rank | | | species | 2046025 | click here |
| acremonium sp. 37-11 | Yes | no rank | | | species | 1500233 | click here |
| actinomadura sp. yim 65650 | Yes | no rank | bacteria | bacteria | species | 714111 | click here |
| actinomadura sp. yim 65655 | Yes | no rank | bacteria | bacteria | species | 714112 | click here |
| actinomadura sp. yim 65659 | Yes | no rank | bacteria | bacteria | species | 714113 | click here |
| actinomadura sp. yim 65810 | Yes | no rank | bacteria | bacteria | species | 714115 | click here |
| agrobacterium fabrum | Yes | species | | | species | 1176649 | click here |
| agrobacterium tumefaciens | Yes | species | bacteria | bacteria | species | 358 | click here |
| alternaria alternata | Yes | species | eukaryota | plants | species | 5599 | click here |
| alternaria arbusti | Yes | species | eukaryota | plants | species | 232088 | click here |
| alternaria argyranthemi | Yes | species | eukaryota | plants | species | 283352 | click here |
| alternaria brassicae | Yes | species | eukaryota | plants | species | 29911 | click here |
| alternaria burnsii | Yes | species | | | species | 1187904 | click here |
| alternaria citri | Yes | species | eukaryota | plants | species | 135859 | click here |
| alternaria eureka | Yes | species | eukaryota | plants | species | 390885 | click here |
| alternaria infectoria | Yes | species | eukaryota | plants | species | 45303 | click here |
| alternaria leptinellae | Yes | species | eukaryota | plants | species | 230013 | click here |
| alternaria leucanthemi | Yes | species | eukaryota | plants | species | 167737 | click here |
| alternaria longipes | Yes | species | eukaryota | plants | species | 160389 | click here |
| alternaria malorum | Yes | species | eukaryota | plants | species | 652027 | click here |
| alternaria multiformis | Yes | species | eukaryota | plants | species | 445261 | click here |
| alternaria oregonensis | Yes | species | eukaryota | plants | species | 283353 | click here |
| alternaria porri | Yes | species | eukaryota | plants | species | 48098 | click here |
| alternaria solani | Yes | species | eukaryota | plants | species | 48100 | click here |
| alternaria sp. | Yes | species | | | species | 1715220 | click here |
| alternaria sp. 6262 | Yes | no rank | | | species | 1155311 | click here |
| alternaria sp. a9 | Yes | no rank | | | species | 1842655 | click here |
| alternaria sp. as1 | Yes | no rank | | | species | 1842656 | click here |
| alternaria sp. gzucczy0015 | Yes | no rank | | | species | 1453506 | click here |
| alternaria sp. gzucczy0804 | Yes | no rank | | | species | 1453507 | click here |
| alternaria sp. mc3re-its28 | Yes | no rank | | | species | 1138507 | click here |
| alternaria sp. sps-04 | Yes | no rank | | | species | 1565366 | click here |
| alternaria tenuissima | Yes | species | eukaryota | plants | species | 119927 | click here |
| alternaria ventricosa | Yes | species | | | species | 1187951 | click here |
| alternariaster helianthi | Yes | species | eukaryota | plants | species | 1342371 | click here |
| amonostherium lichtensioides | Yes | species | eukaryota | invertebrates | species | 252477 | click here |
| amrasca biguttula | Yes | species | eukaryota | invertebrates | species | 912347 | click here |
| amycolatopsis sp. yim 65625 | Yes | no rank | bacteria | bacteria | species | 714117 | click here |
| antennariella placitae | Yes | species | eukaryota | plants | species | 673152 | click here |
| anthostomella pinea | Yes | species | eukaryota | plants | species | 933095 | click here |
| aphis canae | Yes | species | | | species | 1455640 | click here |
| aphis gossypii | Yes | species | eukaryota | invertebrates | species | 80765 | click here |
| aphis sp. dml-2014 | Yes | no rank | | | species | 1457204 | click here |
| aplosporella prunicola | Yes | species | eukaryota | plants | species | 462254 | click here |
| arabis mosaic virus | Yes | species | viruses and viroids | viruses | species | 12271 | click here |
| 'argyranthemum frutescens' phytoplasma | Yes | species | | | species | 1532861 | click here |
| artemisia carvifolia genomoviridae | Yes | species | | | species | 2739880 | click here |
| artemisia carvifolia potyvirus | Yes | species | | | species | 2739374 | click here |
| 'artemisia scoparia' witches'-broom phytoplasma | Yes | species | | | species | 1809191 | click here |
| artemisia virus a | Yes | species | | | species | 1133751 | click here |
| artemisia virus b | Yes | species | | | species | 2812730 | click here |
| 'artemisia vulgaris' little leaf yellowing phytoplasma | Yes | species | | | species | 1144747 | click here |
| 'artemisia vulgaris' phytoplasma | Yes | species | | | species | 1177237 | click here |
| artemisia witches'-broom phytoplasma | Yes | species | bacteria | bacteria | species | 415756 | click here |
| arthrinium sacchari | Yes | species | eukaryota | plants | species | 166626 | click here |
| arthrobacter globiformis | Yes | species | bacteria | bacteria | species | 1665 | click here |
| arthrobacter humicola | Yes | species | bacteria | bacteria | species | 409291 | click here |
| ascochyta phacae | Yes | species | eukaryota | plants | species | 487633 | click here |
| ascochyta sp. | Yes | species | | | species | 1756117 | click here |
| ascomycota sp. 18-2 | Yes | no rank | | | species | 1500227 | click here |
| ascomycota sp. 37-4 | Yes | no rank | | | species | 1500228 | click here |
| aspergillus aculeatus | Yes | species | eukaryota | plants | species | 5053 | click here |
| aspergillus flavipes | Yes | species | eukaryota | plants | species | 41900 | click here |
| aspergillus flavus | Yes | species | eukaryota | plants | species | 5059 | click here |
| aspergillus fumigatus | Yes | species | eukaryota | plants | species | 746128 | click here |
| aspergillus niger | Yes | species | eukaryota | plants | species | 5061 | click here |
| aspergillus nomius | Yes | species | eukaryota | plants | species | 41061 | click here |
| aspergillus oryzae | Yes | species | eukaryota | plants | species | 5062 | click here |
| aspergillus sp. | Yes | no rank | eukaryota | plants | species | 5065 | click here |
| aspergillus sp. 37-12 | Yes | no rank | | | species | 1500229 | click here |
| aspergillus sp. gzuccky0002 | Yes | no rank | | | species | 1453508 | click here |
| aspergillus sp. gzucczy0803 | Yes | no rank | | | species | 1453509 | click here |
| aspergillus sp. gzucczy0901 | Yes | no rank | | | species | 1453510 | click here |
| aspergillus versicolor | Yes | species | eukaryota | plants | species | 46472 | click here |
| aster yellows phytoplasma | Yes | subspecies | bacteria | bacteria | species | 35779 | click here |
| athelia rolfsii | Yes | species | eukaryota | plants | species | 39291 | click here |
| aureobasidium pullulans | Yes | species | eukaryota | plants | species | 5580 | click here |
| bacillaceae bacterium | Yes | species | | | species | 1889774 | click here |
| bacillales bacterium | Yes | species | | | species | 1904864 | click here |
| bacillus aryabhattai | Yes | species | bacteria | bacteria | species | 412384 | click here |
| bacillus cereus | Yes | species | bacteria | bacteria | species | 1396 | click here |
| bacillus licheniformis | Yes | species | bacteria | bacteria | species | 1402 | click here |
| bacillus sp. | Yes | species | bacteria | bacteria | species | 1409 | click here |
| bacillus sp. dt2-01 | Yes | no rank | | | species | 1433250 | click here |
| bacillus sp. st 5-02 | Yes | no rank | | | species | 1533955 | click here |
| bacillus sp. sz3 | Yes | no rank | bacteria | bacteria | species | 879554 | click here |
| bacillus sp. ut 6-01 | Yes | no rank | | | species | 1533956 | click here |
| bacillus subtilis | Yes | species | bacteria | bacteria | species | 1423 | click here |
| bacillus thuringiensis | Yes | species | bacteria | bacteria | species | 1428 | click here |
| bacillus vallismortis | Yes | species | bacteria | bacteria | species | 72361 | click here |
| balclutha abdominalis | Yes | species | | | species | 1473613 | click here |
| balclutha incisa | Yes | species | | | species | 1401693 | click here |