| adeno-associated dependoparvovirus b | No | species | | | species | 1511892 | click here |
| anaplasma phagocytophilum | No | species | bacteria | bacteria | species | 948 | click here |
| cryptosporidium rubeyi | No | species | | | species | 1761662 | click here |
| cryptosporidium sp. cervine genotype | No | no rank | eukaryota | invertebrates | species | 571951 | click here |
| cryptosporidium sp. ground squirrel genotype ii | No | no rank | | | species | 1759702 | click here |
| cryptosporidium sp. sltl05c | No | no rank | eukaryota | invertebrates | species | 359985 | click here |
| encephalomyocarditis virus | No | no rank | viruses and viroids | viruses | no rank | 12104 | click here |
| enterocytozoon bieneusi | No | species | eukaryota | plants | species | 31281 | click here |
| escherichia marmotae | No | species | | | species | 1499973 | click here |
| giardia intestinalis | No | species | eukaryota | invertebrates | species | 5741 | click here |
| giardia intestinalis assemblage e | No | no rank | | | no rank | 1394985 | click here |
| hepatitis b virus | No | species | viruses and viroids | viruses | species | 10407 | click here |
| hepatovirus a | No | species | viruses and viroids | viruses | species | 12092 | click here |
| himalayan marmot bocaparvovirus 1 | No | species | | | species | 2059413 | click here |
| himalayan marmot bocaparvovirus 2 | No | species | | | species | 2059415 | click here |
| lactobacillus sp. ht111-2 | No | no rank | | | species | 2495899 | click here |
| lactobacillus sp. ht170-2 | No | no rank | | | species | 2495900 | click here |
| listeria ivanovii | No | species | bacteria | bacteria | species | 1638 | click here |
| mamastrovirus sp. | No | species | | | species | 1912147 | click here |
| marmot astrovirus 1 | No | species | | | species | 2161797 | click here |
| marmot astrovirus 2 | No | species | | | species | 2161798 | click here |
| marmot astrovirus 3 | No | species | | | species | 2161799 | click here |
| marmot astrovirus 4 | No | species | | | species | 2161800 | click here |
| marmot astrovirus 5 | No | species | | | species | 2161801 | click here |
| marmot astrovirus 6 | No | species | | | species | 2161802 | click here |
| marmot cardiovirus | No | species | | | species | 2161811 | click here |
| marmot kobuvirus | No | species | | | species | 2161810 | click here |
| marmot mosavirus | No | species | | | species | 2161809 | click here |
| marmot norovirus | No | species | | | species | 2161807 | click here |
| marmot picobirnavirus | No | species | | | species | 2161795 | click here |
| marmot sapelovirus 1 | No | species | | | species | 2161803 | click here |
| marmot sapelovirus 2 | No | species | | | species | 2161804 | click here |
| marmot sapovirus | No | species | | | species | 2161805 | click here |
| qinghai himalayan marmot astrovirus 1 | No | species | | | species | 1961665 | click here |
| qinghai himalayan marmot astrovirus 2 | No | species | | | species | 1961666 | click here |
| streptococcus halotolerans | No | species | | | species | 1814128 | click here |
| streptococcus marmotae | No | species | | | species | 1825069 | click here |
| streptococcus respiraculi | No | species | | | species | 2021971 | click here |
| tick-borne encephalitis virus | No | species | viruses and viroids | viruses | species | 11084 | click here |
| uncultured anaplasma sp. | No | no rank | bacteria | environmental samples | species | 319051 | click here |
| woodchuck hepatitis virus | No | species | viruses and viroids | viruses | species | 35269 | click here |
| yersinia pestis | No | species | bacteria | bacteria | species | 632 | click here |