| acinetobacter baumannii | Yes | species | bacteria | bacteria | species | 470 | click here |
| acinetobacter junii | Yes | species | bacteria | bacteria | species | 40215 | click here |
| aeromonas dhakensis | Yes | species | bacteria | bacteria | species | 196024 | click here |
| aeromonas hydrophila | Yes | species | bacteria | bacteria | species | 644 | click here |
| aeromonas veronii | Yes | species | bacteria | bacteria | species | 654 | click here |
| alcanivorax sp. gi-cmst1 | Yes | no rank | bacteria | bacteria | species | 768475 | click here |
| anisakis pegreffii | Yes | species | eukaryota | invertebrates | species | 303229 | click here |
| anisakis simplex | No | species | eukaryota | invertebrates | species | 6269 | click here |
| anisakis simplex | Yes | species | eukaryota | invertebrates | species | 6269 | click here |
| anisakis sp. tk-2013 | Yes | no rank | | | species | 1286641 | click here |
| aphanomyces invadans | Yes | species | eukaryota | plants | species | 157072 | click here |
| aphanomyces sp. 84-1240 | Yes | no rank | eukaryota | plants | species | 168136 | click here |
| austrodiplostomum ostrowskiae | Yes | species | | | species | 1343082 | click here |
| bacillus altitudinis | Yes | species | bacteria | bacteria | species | 293387 | click here |
| bacillus cereus | Yes | species | bacteria | bacteria | species | 1396 | click here |
| bacillus safensis | Yes | species | bacteria | bacteria | species | 561879 | click here |
| bacillus thuringiensis | Yes | species | bacteria | bacteria | species | 1428 | click here |
| bacillus xiamenensis | Yes | species | | | species | 1178537 | click here |
| beihai fish astrovirus 1 | Yes | species | | | species | 2116127 | click here |
| betanodavirus sp. | Yes | species | | | species | 1906674 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| bomolochus cuneatus | Yes | species | eukaryota | invertebrates | species | 864309 | click here |
| caligus clemensi | Yes | species | eukaryota | invertebrates | species | 344056 | click here |
| callitetrarhynchus gracilis | Yes | species | eukaryota | invertebrates | species | 116771 | click here |
| ceratomyxa auerbachi | Yes | species | eukaryota | invertebrates | species | 521390 | click here |
| cf. latyspora sp. ak-2014 | Yes | no rank | | | species | 1483226 | click here |
| citrobacter freundii | Yes | species | bacteria | bacteria | species | 546 | click here |
| clavellisa emarginata | Yes | species | | | species | 1679968 | click here |
| comamonas terrigena | Yes | species | bacteria | bacteria | species | 32013 | click here |
| contracaecum cf. osculatum c ak-2008 | Yes | no rank | eukaryota | invertebrates | species | 559496 | click here |
| contracaecum osculatum | Yes | species | eukaryota | invertebrates | species | 106324 | click here |
| corynebacterium mucifaciens | Yes | species | bacteria | bacteria | species | 57171 | click here |
| corynebacterium propinquum | Yes | species | bacteria | bacteria | species | 43769 | click here |
| cryptocotyle lingua | Yes | species | eukaryota | invertebrates | species | 66766 | click here |
| enterobacter cloacae | Yes | species | bacteria | bacteria | species | 550 | click here |
| erwinia sp. | Yes | no rank | bacteria | bacteria | species | 558 | click here |
| erythrocytic necrosis virus | Yes | species | | | species | 1543320 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| eubothrium fragile | Yes | species | | | species | 1684396 | click here |
| exiguobacterium sp. hilsa-krc-2 | Yes | no rank | | | species | 1776306 | click here |
| flavobacterium columnare | Yes | species | bacteria | bacteria | species | 996 | click here |
| glugea plecoglossi | Yes | species | eukaryota | plants | species | 40978 | click here |
| glugea sp. | Yes | species | eukaryota | plants | species | 191434 | click here |
| glugea sp. lm-2016 | Yes | no rank | | | species | 1807214 | click here |
| goussia ameliae | Yes | species | | | species | 1622023 | click here |
| goussia clupearum | Yes | species | | | species | 1752045 | click here |
| gyrodactylus harengi | Yes | species | eukaryota | invertebrates | species | 157960 | click here |
| halobacterium salinarum | Yes | species | archaea | bacteria | species | 2242 | click here |
| halobacterium sp. | Yes | no rank | archaea | bacteria | species | 2243 | click here |
| halococcus dombrowskii | Yes | species | archaea | bacteria | species | 179637 | click here |
| halococcus sp. | Yes | no rank | archaea | bacteria | species | 29286 | click here |
| halococcus thailandensis | Yes | species | archaea | bacteria | species | 335952 | click here |
| halorubrum trapanicum | Yes | species | archaea | bacteria | species | 29284 | click here |
| hemiurus appendiculatus | Yes | species | | | species | 1679970 | click here |
| hoferellus sp. 'alosae' | Yes | no rank | | | species | 1779721 | click here |
| hysterothylacium aduncum | Yes | species | eukaryota | invertebrates | species | 118886 | click here |
| hysterothylacium amoyense | Yes | species | | | species | 1648950 | click here |
| ichthyodinium chabelardi | Yes | species | eukaryota | invertebrates | species | 393032 | click here |
| ichthyophonus hoferi | Yes | species | eukaryota | invertebrates | species | 39843 | click here |
| ichthyophonus sp. jlg-2013d | Yes | no rank | | | species | 1443988 | click here |
| ichthyophonus sp. jlg-2013e | Yes | no rank | | | species | 1443989 | click here |
| ichthyophonus sp. jlg-2013f | Yes | no rank | | | species | 1443990 | click here |
| infectious pancreatic necrosis virus | Yes | species | viruses and viroids | viruses | species | 11002 | click here |
| infectious spleen and kidney necrosis virus | Yes | species | viruses and viroids | viruses | species | 180170 | click here |
| klebsiella pneumoniae | Yes | species | bacteria | bacteria | species | 573 | click here |
| kudoa clupeidae | Yes | species | eukaryota | invertebrates | species | 223648 | click here |
| kudoa thyrsites | Yes | species | eukaryota | invertebrates | species | 69470 | click here |
| kurthia gibsonii | Yes | species | bacteria | bacteria | species | 33946 | click here |
| kushneria sp. x49 | Yes | no rank | bacteria | bacteria | species | 698828 | click here |
| lactococcus lactis | Yes | species | bacteria | bacteria | species | 1358 | click here |
| lernanthropus dussumieria | Yes | species | | | species | 1520342 | click here |
| mazocraeoides gonialosae | Yes | species | eukaryota | invertebrates | species | 576922 | click here |
| mazocraes alosae | Yes | species | | | species | 1679966 | click here |
| micrococcus yunnanensis | Yes | species | bacteria | bacteria | species | 566027 | click here |
| morganella morganii | Yes | species | bacteria | bacteria | species | 582 | click here |
| mycobacterium pseudoshottsii | Yes | species | bacteria | bacteria | species | 265949 | click here |
| oceanobacillus oncorhynchi | Yes | species | bacteria | bacteria | species | 545501 | click here |
| opisthonema libertate | Yes | species | eukaryota | vertebrates | species | 259987 | click here |
| opisthonema medirastre | Yes | species | eukaryota | vertebrates | species | 681939 | click here |
| ortholinea sp. ash-2015 | Yes | no rank | | | species | 1779722 | click here |
| paenibacillus thiaminolyticus | Yes | species | bacteria | bacteria | species | 49283 | click here |
| photobacterium iliopiscarium | Yes | species | bacteria | bacteria | species | 56192 | click here |
| photobacterium phosphoreum | Yes | species | bacteria | bacteria | species | 659 | click here |
| pilchard orthomyxovirus | No | species | | | species | 2732827 | click here |
| piscine reovirus | No | species | | | species | 1157337 | click here |
| plistophora cepedianae | Yes | species | | | species | | click here |
| proteus vulgaris | Yes | species | bacteria | bacteria | species | 585 | click here |
| providencia rettgeri | Yes | species | bacteria | bacteria | species | 587 | click here |
| pseudomonas aeruginosa | Yes | species | bacteria | bacteria | species | 287 | click here |
| pseudomonas otitidis | Yes | species | bacteria | bacteria | species | 319939 | click here |
| pseudomonas sp. j465 | Yes | no rank | bacteria | bacteria | species | 674034 | click here |
| psychrobacter sp. j466 | Yes | no rank | bacteria | bacteria | species | 674035 | click here |
| raoultella planticola | Yes | species | bacteria | bacteria | species | 575 | click here |
| redspotted grouper nervous necrosis virus | Yes | species | viruses and viroids | viruses | species | 43763 | click here |
| rhadinorhynchus pristis | Yes | species | | | species | 1155701 | click here |
| rhodovulum sulfidophilum | Yes | species | bacteria | bacteria | species | 35806 | click here |
| ryukyua circularis | Yes | species | | | species | 1892237 | click here |
| saprolegnia diclina | Yes | species | eukaryota | plants | species | 112098 | click here |
| sardina pilchardus betanodavirus | Yes | species | | | species | 1110527 | click here |
| shewanella baltica | Yes | species | bacteria | bacteria | species | 62322 | click here |