| alternaria alternata | No | species | eukaryota | plants | species | 5599 | click here |
| alternaria limicola | No | species | eukaryota | plants | species | 232087 | click here |
| anastrepha ludens | No | species | eukaryota | invertebrates | species | 28586 | click here |
| botryosphaeria dothidea | No | species | eukaryota | plants | species | 55169 | click here |
| brevipalpus californicus | No | species | eukaryota | invertebrates | species | 242797 | click here |
| candidatus liberibacter asiaticus | No | subspecies | bacteria | bacteria | species | 34021 | click here |
| 'citrus aurantium' little leaf phytoplasma | No | species | | | species | 1857003 | click here |
| citrus chlorotic dwarf associated virus | No | species | | | species | 1202142 | click here |
| citrus exocortis viroid | No | species | viruses and viroids | viruses | species | 12890 | click here |
| citrus mosaic sadwavirus | No | no rank | viruses and viroids | viruses | no rank | 57325 | click here |
| citrus psorosis virus | No | no rank | viruses and viroids | viruses | no rank | 73561 | click here |
| citrus tristeza virus | No | species | viruses and viroids | viruses | species | 12162 | click here |
| citrus variegation virus | No | species | viruses and viroids | viruses | species | 37127 | click here |
| citrus vein enation virus | No | species | | | species | 1301220 | click here |
| citrus yellow vein clearing virus | No | species | | | species | 1214459 | click here |
| colletotrichum gloeosporioides | No | species | eukaryota | plants | species | 474922 | click here |
| colletotrichum siamense | No | species | eukaryota | plants | species | 690259 | click here |
| colletotrichum sp. ethctr050 | No | no rank | | | species | 1684497 | click here |
| colletotrichum sp. ethctr103 | No | no rank | | | species | 1684501 | click here |
| curvularia lunata | No | species | eukaryota | plants | species | 5503 | click here |
| daldinia eschscholtzii | No | species | eukaryota | plants | species | 292717 | click here |
| didymella microchlamydospora | No | species | eukaryota | plants | species | 646056 | click here |
| diplodia seriata | No | species | eukaryota | plants | species | 420778 | click here |
| elsinoe australis | No | species | eukaryota | plants | species | 40998 | click here |
| elsinoe fawcettii | No | species | eukaryota | plants | species | 40997 | click here |
| fusarium falciforme | No | species | eukaryota | plants | species | 195108 | click here |
| fusarium lateritium | No | species | eukaryota | plants | species | 5523 | click here |
| fusarium oxysporum | No | species | eukaryota | plants | species | 5507 | click here |
| fusarium solani | No | species | eukaryota | plants | species | 169388 | click here |
| ganoderma lucidum | No | species | eukaryota | plants | species | 5315 | click here |
| ganoderma resinaceum | No | species | eukaryota | plants | species | 34465 | click here |
| hop stunt viroid | No | species | viruses and viroids | viruses | species | 12893 | click here |
| lasiodiplodia pseudotheobromae | No | species | eukaryota | plants | species | 466954 | click here |
| macrophomina phaseolina | No | species | eukaryota | plants | species | 35725 | click here |
| microcera coccophila | No | species | | | species | 1053151 | click here |
| neodidymelliopsis farokhinejadii | No | species | | | species | 1965134 | click here |
| neoscytalidium dimidiatum | No | species | eukaryota | plants | species | 108428 | click here |
| neoscytalidium hyalinum | No | species | eukaryota | plants | species | 1451147 | click here |
| neoscytalidium sp. | No | species | | | species | 1881976 | click here |
| orchid fleck virus | No | species | viruses and viroids | viruses | species | 152177 | click here |
| parlatoria pergandii | No | species | eukaryota | invertebrates | species | 340602 | click here |
| penicillium digitatum | No | species | eukaryota | plants | species | 36651 | click here |
| penicillium janthinellum | No | species | eukaryota | plants | species | 5079 | click here |
| phaeoacremonium fraxinopennsylvanicum | No | species | eukaryota | plants | species | 93811 | click here |
| phyllosticta capitalensis | No | species | eukaryota | plants | species | 121624 | click here |
| phyllosticta citricarpa | No | species | eukaryota | plants | species | 55181 | click here |
| phyllosticta paracapitalensis | No | species | | | species | 2016320 | click here |
| pinnaspis aspidistrae | No | species | eukaryota | invertebrates | species | 340605 | click here |
| plenodomus tracheiphilus | No | species | | | species | 1077377 | click here |
| polychaeton citri | No | species | eukaryota | plants | species | 705562 | click here |
| pythium aphanidermatum | No | species | eukaryota | plants | species | 65070 | click here |
| rhizoctonia solani | No | species | eukaryota | plants | species | 456999 | click here |
| rotylenchus unisexus | No | species | eukaryota | invertebrates | species | 501215 | click here |
| saissetia oleae | No | species | | | species | 1661407 | click here |
| spencermartinsia viticola | No | species | eukaryota | plants | species | 323561 | click here |
| sphingomonas sp. | No | no rank | bacteria | bacteria | species | 28214 | click here |
| streptomyces sp. | No | species | bacteria | bacteria | species | 1931 | click here |
| tetranychus urticae | No | species | eukaryota | invertebrates | species | 32264 | click here |
| trichoderma lixii | No | species | eukaryota | plants | species | 1491472 | click here |
| uncultured leptosphaerulina | No | no rank | eukaryota | environmental samples | species | 526462 | click here |
| xylaria sp. | No | species | | | species | 1715255 | click here |
| xylariaceae sp. | No | species | | | species | 1881983 | click here |