| anaplasma bovis | Yes | species | bacteria | bacteria | species | 186733 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| borreliella burgdorferi | Yes | species | bacteria | bacteria | species | 139 | click here |
| capillaria hepatica | Yes | species | | | species | 1239592 | click here |
| cryptosporidium viatorum | Yes | species | | | species | 1176757 | click here |
| cyclodontostomum purvisi | Yes | species | eukaryota | invertebrates | species | 321341 | click here |
| giardia intestinalis | Yes | species | eukaryota | invertebrates | species | 5741 | click here |
| hepacivirus sp. | Yes | species | | | species | 2202624 | click here |
| hymenolepis diminuta | Yes | species | eukaryota | invertebrates | species | 6216 | click here |
| hymenolepis nana | Yes | species | eukaryota | invertebrates | species | 102285 | click here |
| hymenolepis sp. a vh-2011 | Yes | no rank | | | species | 1017315 | click here |
| mamastrovirus sp. | Yes | species | | | species | 1912147 | click here |
| murine coronavirus | Yes | species | viruses and viroids | viruses | species | 694005 | click here |
| paramyxoviridae sp. | Yes | species | | | species | 1663356 | click here |
| piroplasmida sp. leopoldamys/hunan/2010 | Yes | no rank | eukaryota | invertebrates | species | 927617 | click here |
| raillietina sp. vh-2014b | Yes | no rank | | | species | 1576516 | click here |
| riboviria sp. | Yes | species | | | species | 2585031 | click here |
| uncultured borrelia sp. | Yes | no rank | bacteria | environmental samples | species | 198435 | click here |
| uncultured mycoplasma sp. | Yes | no rank | bacteria | environmental samples | species | 167967 | click here |