| andes orthohantavirus | Yes | species | | | species | 1980456 | click here |
| anelloviridae sp. | Yes | species | | | species | 2055263 | click here |
| araraquara virus | Yes | no rank | viruses and viroids | viruses | no rank | 139032 | click here |
| aspergillus sp. | Yes | no rank | eukaryota | plants | species | 5065 | click here |
| aspergillus sydowii | Yes | species | eukaryota | plants | species | 75750 | click here |
| aspergillus westerdijkiae | Yes | species | eukaryota | plants | species | 357447 | click here |
| bartonella sp. | Yes | species | bacteria | bacteria | species | 46358 | click here |
| bartonella sp. b29042 | Yes | no rank | bacteria | bacteria | species | 912530 | click here |
| bartonella sp. b29043 | Yes | no rank | bacteria | bacteria | species | 912531 | click here |
| bartonella sp. b29044 | Yes | no rank | bacteria | bacteria | species | 912532 | click here |
| bartonella sp. b29107 | Yes | no rank | bacteria | bacteria | species | 912535 | click here |
| bartonella sp. b29108 | Yes | no rank | bacteria | bacteria | species | 912536 | click here |
| bartonella sp. b29114 | Yes | no rank | bacteria | bacteria | species | 912541 | click here |
| bartonella sp. b29119 | Yes | no rank | bacteria | bacteria | species | 912544 | click here |
| bartonella sp. b29122 | Yes | no rank | bacteria | bacteria | species | 912545 | click here |
| bat alphacoronavirus | Yes | species | | | species | 2419667 | click here |
| bat astrovirus | Yes | species | | | species | 1697918 | click here |
| bat coronavirus | Yes | species | | | species | 1508220 | click here |
| bat coronavirus dr/2007 | Yes | no rank | viruses and viroids | viruses | species | 482176 | click here |
| bat coronavirus/4292/2013/desmodus rotundus/brazil | Yes | no rank | | | species | 1868636 | click here |
| bat hepevirus | Yes | species | | | species | 1216472 | click here |
| bat paramyxovirus | Yes | species | | | species | 1300978 | click here |
| bat pegivirus | Yes | subspecies | viruses and viroids | viruses | no rank | 1112699 | click here |
| bat picornavirus | Yes | species | | | species | 1281456 | click here |
| bat polyomavirus | Yes | species | | | species | 1221637 | click here |
| bat rotavirus | Yes | species | | | species | 1340801 | click here |
| candida orthopsilosis | Yes | species | eukaryota | plants | species | 273371 | click here |
| candida parapsilosis | Yes | species | eukaryota | plants | species | 5480 | click here |
| cladosporium sp. | Yes | species | | | species | 1707700 | click here |
| curvularia sp. | Yes | species | | | species | 1715225 | click here |
| dengue virus | Yes | species | viruses and viroids | viruses | species | 12637 | click here |
| desmodus rotundus adenovirus 1 | Yes | species | | | species | 1905319 | click here |
| desmodus rotundus adenovirus 2 | Yes | species | | | species | 1905320 | click here |
| desmodus rotundus adenovirus poa/2012/n5.1 | Yes | no rank | | | species | 1288703 | click here |
| desmodus rotundus circovirus 1 | Yes | species | | | species | 1959762 | click here |
| desmodus rotundus dependoparvovirus | Yes | species | | | species | 2137542 | click here |
| desmodus rotundus endogenous retrovirus | Yes | species | | | species | 1622024 | click here |
| desmodus rotundus gammaherpesvirus | Yes | species | | | species | 1954225 | click here |
| desmodus rotundus parvovirus | Yes | species | | | species | 1926498 | click here |
| desmodus rotundus polyomavirus 1 | Yes | species | | | species | 1606503 | click here |
| diphylla ecaudata gammaherpesvirus | Yes | species | | | species | 1954226 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| fusarium sp. | Yes | species | eukaryota | plants | species | 29916 | click here |
| gammaherpesvirinae sp. | Yes | species | | | species | 2014080 | click here |
| genomoviridae sp. | Yes | species | | | species | 2202565 | click here |
| gymnoascus dankaliensis | Yes | species | eukaryota | plants | species | 166389 | click here |
| hantavirus 2075 biritiba mirim | Yes | no rank | viruses and viroids | viruses | species | 587486 | click here |
| hantavirus 2076 biritiba mirim | Yes | no rank | viruses and viroids | viruses | species | 587487 | click here |
| hepacivirus n | Yes | species | | | species | 2008773 | click here |
| histoplasma capsulatum | Yes | species | eukaryota | plants | species | 5037 | click here |
| ilheus virus | Yes | species | viruses and viroids | viruses | species | 59563 | click here |
| leishmania amazonensis | Yes | species | eukaryota | invertebrates | species | 5659 | click here |
| leishmania mexicana | Yes | species | eukaryota | invertebrates | species | 5665 | click here |
| leptospira borgpetersenii | Yes | species | bacteria | bacteria | species | 174 | click here |
| meyerozyma sp. | Yes | species | | | species | 1894960 | click here |
| middle east respiratory syndrome coronavirus | Yes | species | viruses and viroids | viruses | species | 1335626 | click here |
| morganella morganii | Yes | species | bacteria | bacteria | species | 582 | click here |
| myroides odoratus | Yes | species | bacteria | bacteria | species | 256 | click here |
| nothophoma sp. | Yes | species | | | species | 2011825 | click here |
| ochroconis sp. | Yes | species | | | species | 1715239 | click here |
| ornithodoros peruvianus | Yes | species | eukaryota | invertebrates | species | 879266 | click here |
| paecilomyces sp. | Yes | no rank | eukaryota | plants | species | 40383 | click here |
| paramyxoviridae sp. | Yes | species | | | species | 1663356 | click here |
| paratrichobius longicrus | Yes | species | eukaryota | invertebrates | species | 402416 | click here |
| penicillium citrinum | Yes | species | eukaryota | plants | species | 5077 | click here |
| porcine orthorubulavirus | Yes | species | | | species | 2560645 | click here |
| purpureocillium sp. | Yes | species | | | species | 1926681 | click here |
| rabies virus | Yes | species | viruses and viroids | viruses | species | 11292 | click here |
| rhinocladiella similis | Yes | species | eukaryota | plants | species | 319420 | click here |
| rhizopus oryzae | Yes | species | eukaryota | plants | species | 64495 | click here |
| rhodotorula sp. | Yes | species | | | species | 1853554 | click here |
| rio bravo virus | Yes | species | viruses and viroids | viruses | species | 64285 | click here |
| salmonella enterica subsp. enterica serovar typhimurium | Yes | no rank | bacteria | bacteria | no rank | 90371 | click here |
| smacoviridae sp. | Yes | species | | | species | 2715094 | click here |
| speiseria ambigua | Yes | species | eukaryota | invertebrates | species | 402418 | click here |
| staphylococcus aureus | Yes | species | bacteria | bacteria | species | 1280 | click here |
| strebla mirabilis | Yes | species | eukaryota | invertebrates | species | 339829 | click here |
| tacaribe mammarenavirus | Yes | species | viruses and viroids | viruses | species | 11631 | click here |
| talaromyces allahabadensis | Yes | species | | | species | 1131641 | click here |
| talaromyces sp. | Yes | species | | | species | 1707706 | click here |
| tamana bat virus | Yes | species | viruses and viroids | viruses | species | 161675 | click here |
| torque teno desmodus rotundus virus | Yes | species | | | species | 2054618 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| trichobius dugesioides | Yes | species | eukaryota | invertebrates | species | 402419 | click here |
| trichobius joblingi | Yes | species | eukaryota | invertebrates | species | 402420 | click here |
| trypanosoma cruzi | Yes | species | eukaryota | invertebrates | species | 5693 | click here |
| trypanosoma dionisii | Yes | species | eukaryota | invertebrates | species | 78083 | click here |
| trypanosoma rangeli | Yes | species | eukaryota | invertebrates | species | 5698 | click here |
| uncultured bartonella sp. | Yes | no rank | bacteria | environmental samples | species | 104108 | click here |
| uncultured borrelia sp. | Yes | no rank | bacteria | environmental samples | species | 198435 | click here |
| uncultured leptospira sp. | Yes | no rank | bacteria | environmental samples | species | 253437 | click here |
| uncultured mycoplasma sp. | Yes | no rank | bacteria | environmental samples | species | 167967 | click here |
| venezuelan equine encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11036 | click here |
| vesicular stomatitis indiana virus | Yes | species | viruses and viroids | viruses | species | 11277 | click here |
| vesicular stomatitis new jersey virus | Yes | species | viruses and viroids | viruses | species | 11280 | click here |