| avipoxvirus isolate illinois | Yes | species | | | species | 1294101 | click here |
| avipoxvirus isolate utah | Yes | species | | | species | 1294116 | click here |
| borreliella bissettii | Yes | species | bacteria | bacteria | species | 64897 | click here |
| borreliella burgdorferi | Yes | species | bacteria | bacteria | species | 139 | click here |
| brueelia vulgata | Yes | species | eukaryota | invertebrates | species | 586346 | click here |
| haemoproteus fringillae | Yes | species | eukaryota | invertebrates | species | 498205 | click here |
| haemoproteus sp. | Yes | species | eukaryota | invertebrates | species | 191679 | click here |
| haemoproteus sp. deju_ca_elw_2h | Yes | no rank | | | species | 1503937 | click here |
| influenza a virus (a/oregon junco/washington/ctr-aiv24/2006) | Yes | no rank | viruses and viroids | viruses | no rank | 767717 | click here |
| influenza a virus (a/oregon junco/washington/ctr-aiv25/2006) | Yes | no rank | viruses and viroids | viruses | no rank | 767718 | click here |
| leucocytozoon fringillinarum | Yes | species | eukaryota | invertebrates | species | 587282 | click here |
| leucocytozoon sp. | Yes | species | | | species | 1504291 | click here |
| proctophyllodes egglestoni | Yes | species | eukaryota | invertebrates | species | 799892 | click here |
| ptilonyssus sairae | Yes | species | | | species | 488256 | click here |
| salmonella enterica subsp. enterica serovar typhimurium | No | no rank | bacteria | bacteria | no rank | 90371 | click here |
| trypanosoma avium | Yes | species | eukaryota | invertebrates | species | 43998 | click here |
| trypanosoma sp. | Yes | species | eukaryota | invertebrates | species | 5696 | click here |
| uncultured rickettsia sp. | Yes | no rank | bacteria | environmental samples | species | 249168 | click here |
| west nile virus | Yes | species | viruses and viroids | viruses | species | 11082 | click here |