| aedes aegypti | Yes | species | eukaryota | invertebrates | species | 7159 | click here |
| aves polyomavirus 1 | Yes | species | | | species | 1891747 | click here |
| avian bornavirus | Yes | species | viruses and viroids | viruses | species | 675389 | click here |
| bacillus licheniformis | Yes | species | bacteria | bacteria | species | 1402 | click here |
| bacillus sp. cc1 | Yes | no rank | bacteria | bacteria | species | 872952 | click here |
| bacillus sp. cc15 | Yes | no rank | bacteria | bacteria | species | 872959 | click here |
| bacillus sp. cc17 | Yes | no rank | bacteria | bacteria | species | 872960 | click here |
| bacterium cc13 | Yes | no rank | bacteria | bacteria | species | 872963 | click here |
| bacterium cc16 | Yes | no rank | bacteria | bacteria | species | 872964 | click here |
| bacterium cc6 | Yes | no rank | bacteria | bacteria | species | 872962 | click here |
| brueelia sp. brsp.lostr.12.11.2011.7 | Yes | no rank | | | species | 1740458 | click here |
| brueelia sp. brsploleu42820125 | Yes | no rank | | | species | 1740545 | click here |
| brueelia sp. brsploleu42820126 | Yes | no rank | | | species | 1740546 | click here |
| brueelia sp. brsplostr326201233 | Yes | no rank | | | species | 1740547 | click here |
| candida albicans | Yes | species | eukaryota | plants | species | 5476 | click here |
| cryptosporidium baileyi | Yes | species | eukaryota | invertebrates | species | 27987 | click here |
| cryptosporidium galli | Yes | species | eukaryota | invertebrates | species | 218119 | click here |
| cryptosporidium sp. manon c7 | Yes | no rank | eukaryota | invertebrates | species | 742352 | click here |
| culex quinquefasciatus | Yes | species | eukaryota | invertebrates | species | 7176 | click here |
| enterobacter cloacae | Yes | species | bacteria | bacteria | species | 550 | click here |
| enterobacter sp. cc18 | Yes | no rank | bacteria | bacteria | species | 872961 | click here |
| enterobacter sp. cc8 | Yes | no rank | bacteria | bacteria | species | 872955 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| estrildidae adenovirus 1 | Yes | species | | | species | 2609082 | click here |
| estrildidae adenovirus 2 | Yes | species | | | species | 2609083 | click here |
| finch polyomavirus | Yes | no rank | viruses and viroids | viruses | no rank | 349564 | click here |
| h5n1 subtype | Yes | no rank | viruses and viroids | viruses | no rank | 102793 | click here |
| haemoproteus sp. | Yes | species | eukaryota | invertebrates | species | 191679 | click here |
| haemoproteus sp. lonbic01 | Yes | no rank | | | species | 1892089 | click here |
| haemoproteus sp. loncuc01 | Yes | no rank | | | species | 1892090 | click here |
| haemoproteus sp. loncuc02 | Yes | no rank | | | species | 1892091 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza a virus (a/chestnut munia/hong kong/2442/2007(h5n1)) | Yes | no rank | viruses and viroids | viruses | no rank | 573959 | click here |
| influenza a virus (a/scaly-breasted munia/hong kong/2433/2007(h5n1)) | Yes | no rank | viruses and viroids | viruses | no rank | 573961 | click here |
| influenza a virus (a/scaly-breasted munia/hong kong/2572/2007(h5n1)) | Yes | no rank | viruses and viroids | viruses | no rank | 573958 | click here |
| influenza a virus (a/scaly-breasted munia/hong kong/45/2007(h5n1)) | Yes | no rank | viruses and viroids | viruses | no rank | 573960 | click here |
| influenza a virus (a/white-backed munia/hong kong/828/2007(h5n1)) | Yes | no rank | viruses and viroids | viruses | no rank | 573947 | click here |
| klebsiella sp. cc11 | Yes | no rank | bacteria | bacteria | species | 872957 | click here |
| klebsiella sp. cc5 | Yes | no rank | bacteria | bacteria | species | 872953 | click here |
| leucocytozoon sabrazesi | Yes | species | eukaryota | invertebrates | species | 434249 | click here |
| lonchura maja polyomavirus 1 | Yes | species | | | species | 2169904 | click here |
| macrorhabdus ornithogaster | Yes | species | eukaryota | plants | species | 349299 | click here |
| micrococcus sp. cc9 | Yes | no rank | bacteria | bacteria | species | 872956 | click here |
| munia coronavirus hku13-3514 | Yes | no rank | viruses and viroids | viruses | no rank | 572289 | click here |
| mycobacterium genavense | Yes | species | bacteria | bacteria | species | 36812 | click here |
| mycoplasma gallisepticum | Yes | species | bacteria | bacteria | species | 2096 | click here |
| plasmodium sp. lin8b | Yes | no rank | eukaryota | invertebrates | species | 445132 | click here |
| plasmodium sp. p15 | Yes | no rank | eukaryota | invertebrates | species | 399039 | click here |
| plasmodium sp. p30 | Yes | no rank | eukaryota | invertebrates | species | 392191 | click here |
| pseudomonas sp. cc4 | Yes | no rank | bacteria | bacteria | species | 418026 | click here |
| pyrrhula pyrrhula polyomavirus 1 | Yes | species | | | species | 1891751 | click here |
| ross river virus | Yes | species | viruses and viroids | viruses | species | 11029 | click here |
| rothia nasimurium | Yes | species | bacteria | bacteria | species | 85336 | click here |
| salmonella enterica subsp. enterica serovar typhimurium | Yes | no rank | bacteria | bacteria | no rank | 90371 | click here |
| serinus canaria polyomavirus | Yes | no rank | | | no rank | 2070023 | click here |
| siadenovirus sp. | Yes | species | | | species | 2671519 | click here |
| staphylococcus aureus | Yes | species | bacteria | bacteria | species | 1280 | click here |
| staphylococcus sp. cc7 | Yes | no rank | bacteria | bacteria | species | 872954 | click here |
| uncultured bacterium | Yes | no rank | bacteria | environmental samples | species | 77133 | click here |
| west nile virus | Yes | species | viruses and viroids | viruses | species | 11082 | click here |
| yersinia pseudotuberculosis | Yes | species | bacteria | bacteria | species | 633 | click here |
| zebra finch circovirus | Yes | species | | | species | 1642515 | click here |