| [clostridium] bolteae | Yes | species | bacteria | bacteria | species | 208479 | click here |
| [clostridium] clostridioforme | Yes | species | bacteria | bacteria | species | 1531 | click here |
| [clostridium] cocleatum | Yes | species | bacteria | bacteria | species | 69824 | click here |
| [clostridium] hylemonae | Yes | species | bacteria | bacteria | species | 89153 | click here |
| [clostridium] innocuum | Yes | species | bacteria | bacteria | species | 1522 | click here |
| [clostridium] piliforme | Yes | species | bacteria | bacteria | species | 1524 | click here |
| [clostridium] symbiosum | Yes | species | bacteria | bacteria | species | 1512 | click here |
| [eubacterium] contortum | Yes | species | bacteria | bacteria | species | 39482 | click here |
| [pasteurella] pneumotropica | Yes | species | bacteria | bacteria | species | 758 | click here |
| [pasteurella] pneumotropica dsm 21403 | Yes | no rank | | | no rank | 1122936 | click here |
| [ruminococcus] gnavus | Yes | species | bacteria | bacteria | species | 33038 | click here |
| [ruminococcus] torques | Yes | species | bacteria | bacteria | species | 33039 | click here |
| acanthamoeba lenticulata | Yes | species | eukaryota | invertebrates | species | 29196 | click here |
| acanthocheilonema viteae | Yes | species | eukaryota | invertebrates | species | 6277 | click here |
| acanthotrema tridactyla | Yes | species | | | species | 1761661 | click here |
| acara virus | Yes | isolate | | | isolate | 2748201 | click here |
| acetatifactor muris | Yes | species | | | species | 879566 | click here |
| acetobacter sp. | Yes | species | bacteria | bacteria | species | 440 | click here |
| achromobacter sp. ynutcm yj221 | Yes | no rank | | | species | 1761982 | click here |
| acinetobacter calcoaceticus | Yes | species | bacteria | bacteria | species | 471 | click here |
| acinetobacter parvus | Yes | species | bacteria | bacteria | species | 134533 | click here |
| acinetobacter radioresistens | Yes | species | bacteria | bacteria | species | 40216 | click here |
| acinetobacter sp. | Yes | species | bacteria | bacteria | species | 472 | click here |
| acinetobacter sp. ncu2d-2 | Yes | no rank | | | species | 1608473 | click here |
| acinetobacter sp. nwi6d48h-2 | Yes | no rank | | | species | 1701569 | click here |
| actinobacteria bacterium | Yes | species | | | species | 1883427 | click here |
| actinomyces bowdenii | Yes | species | bacteria | bacteria | species | 131109 | click here |
| actinomyces sp. | Yes | species | bacteria | bacteria | species | 29317 | click here |
| actinomyces sp. erd15f | Yes | no rank | | | species | 1796608 | click here |
| acutalibacter sp. 1xd8-36 | Yes | no rank | | | species | 2320852 | click here |
| adenovirus predict_adv-19 | Yes | species | | | species | 2710952 | click here |
| adenovirus predict_adv-20 | Yes | species | | | species | 2710954 | click here |
| adenovirus predict_adv-21 | Yes | species | | | species | 2710955 | click here |
| adenovirus predict_adv-22 | Yes | species | | | species | 2710956 | click here |
| adenovirus predict_adv-25 | Yes | species | | | species | 2710959 | click here |
| adenovirus predict_adv-26 | Yes | species | | | species | 2710960 | click here |
| adenovirus predict_adv-31 | Yes | species | | | species | 2710965 | click here |
| adenovirus predict_adv-32 | Yes | species | | | species | 2710966 | click here |
| adenovirus predict_adv-44 | Yes | species | | | species | 2710978 | click here |
| adenovirus predict_adv-46 | Yes | species | | | species | 2710980 | click here |
| adenovirus predict_adv-47 | Yes | species | | | species | 2710981 | click here |
| adenovirus predict_adv-51 | Yes | species | | | species | 2710985 | click here |
| adenovirus predict_adv-52 | Yes | species | | | species | 2710986 | click here |
| adenovirus predict_adv-70 | Yes | species | | | species | 2558900 | click here |
| adenovirus predict_adv-73 | Yes | species | | | species | 2711001 | click here |
| adenovirus predict_adv-74 | Yes | species | | | species | 2711002 | click here |
| adenovirus predict_adv-75 | Yes | species | | | species | 2711003 | click here |
| adenovirus predict_adv-90 | Yes | species | | | species | 2558901 | click here |
| aedes aegypti | Yes | species | eukaryota | invertebrates | species | 7159 | click here |
| aedes albopictus | Yes | species | eukaryota | invertebrates | species | 7160 | click here |
| aedes togoi | Yes | species | eukaryota | invertebrates | species | 55967 | click here |
| aelurostrongylus abstrusus | Yes | species | eukaryota | invertebrates | species | 321389 | click here |
| aerococcus sp. gdlami-n1 | Yes | no rank | bacteria | bacteria | species | 702111 | click here |
| aerococcus urinaeequi | Yes | species | bacteria | bacteria | species | 51665 | click here |
| afrolistrophorus sp. n. ad408 | Yes | no rank | eukaryota | invertebrates | species | 482769 | click here |
| aichivirus a | Yes | species | viruses and viroids | viruses | species | 72149 | click here |
| akhmeta virus | Yes | species | | | species | 2200830 | click here |
| akkermansia muciniphila | Yes | species | bacteria | bacteria | species | 239935 | click here |
| akkermansia sp. | Yes | species | | | species | 1872421 | click here |
| akr (endogenous) murine leukemia virus | Yes | no rank | viruses and viroids | viruses | no rank | 11791 | click here |
| alaria alata | Yes | species | eukaryota | invertebrates | species | 138590 | click here |
| alistipes finegoldii | Yes | species | bacteria | bacteria | species | 214856 | click here |
| alistipes onderdonkii | Yes | species | bacteria | bacteria | species | 328813 | click here |
| alistipes sp. | Yes | species | | | species | 1872444 | click here |
| alistipes timonensis | Yes | species | | | species | 1465754 | click here |
| alphacoronavirus sp. | Yes | species | | | species | 1906673 | click here |
| alphacoronavirus tt-2016a | Yes | species | | | species | 1805601 | click here |
| alphacoronavirus ukrn3 | Yes | species | | | species | 2520504 | click here |
| alphaproteobacteria bacterium | Yes | no rank | | | species | 1913988 | click here |
| amblyomma cordiferum | Yes | species | | | species | 2497096 | click here |
| amphotropic murine leukemia virus | Yes | no rank | viruses and viroids | viruses | no rank | 188539 | click here |
| amsterdam virus | Yes | species | | | species | 2613795 | click here |
| amur virus | Yes | species | viruses and viroids | viruses | species | 86782 | click here |
| amur virus solovey/ap61/1999 | Yes | no rank | viruses and viroids | viruses | no rank | 170954 | click here |
| amur virus solovey/ap63/1999 | Yes | no rank | viruses and viroids | viruses | no rank | 170955 | click here |
| anaerofustis stercorihominis | Yes | species | bacteria | bacteria | species | 214853 | click here |
| anaerosalibacter sp. mas-g9k2r3-tgb-98 | Yes | no rank | | | species | 1796609 | click here |
| anaerotruncus colihominis | Yes | species | bacteria | bacteria | species | 169435 | click here |
| anaerotruncus sp. 1xd42-93 | Yes | no rank | | | species | 2320853 | click here |
| anaerotruncus sp. 80 | Yes | no rank | | | species | 2304566 | click here |
| anaerotruncus sp. g3(2012) | Yes | no rank | | | species | 1235835 | click here |
| anaerotruncus sp. x29 | Yes | no rank | | | species | 2304567 | click here |
| anaplasma bovis | Yes | species | bacteria | bacteria | species | 186733 | click here |
| anaplasma ovis | Yes | species | bacteria | bacteria | species | 142058 | click here |
| anaplasma phagocytophilum | Yes | species | bacteria | bacteria | species | 948 | click here |
| anaplasma sp. 17889aa | Yes | no rank | bacteria | bacteria | species | 415957 | click here |
| anaplasma sp. 17901aa | Yes | no rank | bacteria | bacteria | species | 415958 | click here |
| anaplasma sp. zj24/2007 | Yes | no rank | bacteria | bacteria | species | 614673 | click here |
| anaplasma sp. zj34/2006 | Yes | no rank | bacteria | bacteria | species | 439610 | click here |
| anatrichosoma haycocki | Yes | species | eukaryota | invertebrates | species | 119101 | click here |
| ancylostoma caninum | Yes | species | eukaryota | invertebrates | species | 29170 | click here |
| ancylostoma ceylanicum | Yes | species | eukaryota | invertebrates | species | 53326 | click here |
| andes orthohantavirus | Yes | species | | | species | 1980456 | click here |
| anelloviridae sp. | Yes | species | | | species | 2055263 | click here |
| angiostrongylus cantonensis | Yes | species | eukaryota | invertebrates | species | 6313 | click here |
| angiostrongylus costaricensis | Yes | species | eukaryota | invertebrates | species | 334426 | click here |
| angiostrongylus dujardini | Yes | species | eukaryota | invertebrates | species | 274538 | click here |
| angiostrongylus mackerrasae | Yes | species | | | species | 1659310 | click here |
| angiostrongylus malaysiensis | Yes | species | eukaryota | invertebrates | species | 458178 | click here |
| angiostrongylus sp. dnus-2013-03-11-sm256 | Yes | no rank | | | species | 2015504 | click here |